Ll_transcript_304845

• Id Trinity: TRINITY_DN52212_c4_g2_i12
• Name Transcript: Ll_transcript_304845
• Sequence: CAATTAGAAGGTACTCGAAGTTTTTGGAACCTGCGTCATTACTCTATATTCTCACTCCTTCTTTTTCTTCTTCTCTTAATTCCTCACACAAATTCACATT TCTTCATTTCCCATTCTCGTCTTAGTTTCCACTCTCTGATCTCACTCTTTCATTTTCATCATCTTCATGGCTTCTACGACGTCGTTTTCATCTCTTTTCT TTTCTCACTCACTTCCTATTTCTAGTAACCGAAACCATCATCACAATCATATTTCCCTCGCTTTTTCCGCTAAACCCAGTTTTCCAAATACTCTCAAATC GTTACCGTTGAAGAAAAGATGCGTTTTTTCTAATGGGCTTCAGAGAAATTTAAGAAATTCTACTCGTTTCTCTGTTCGTTGTGAAGCATCCTCTAGTGGA AGGATTACACAGCAAGAGTTCACAGAAATGGCATGGCAGGCAATAGTTTCGTCACCAGAAGTGGCGAAGGAGAATAAGCATCAGATTGTGGAGACAGAGC ACTTGATGAAGGCTTTGTTGGAGCAGAAGAACGGACTTGCTCGCAGGATATTTTCCAAGGTCGGGGTTGATAACACTCGGCTTCTAGAAGCTACGGATAA GTACATTCAGAGACAACCCAAGGTGCTAGGAGAATCAGCTGGTTCAATGTTGGGGCGTGATTTGGAGGCATTGATTCAGAGAGCCAGGGACTACAAGAAG GAATATGAGGATTCATTTGTTTCAGTTGAGCACTTGGTTCTTGGATTTGCCCAAGATCAACGATTTGGGAAGCAGTTCTTTAAAGATTTTCAAATATCTC AGCAGGCTCTTAAATCTGCAATAGAGTCTGTTAGAGGACGCCAGTCAGTTATTGACCAGGATCCCGAAGGGAAGTATGAAGCCTTGGAAAAATATGGGAA AGATTTGACAGCAATGGCTAAAGCAGGAAAACTTGACCCAGTCATAGGAAGAGATGATGAAATACGTAGGTGCATCCAGATTCTGTCCAGAAGGACAAAG AACAATCCTGTCCTAATCGGTGAGCCTGGTGTTGGAAAGACTGCAATTTCTGAAGGACTTGCTCAGAGAATTGTTCAAGGAGATGTTCCTCAAGCTTTGA TGAACCGCAGGCTTATATCGCTTGATATGGGTTCACTTATTGCTGGAGCAAAGTACCGGGGAGAATTTGAGGATAGGCTGAAAGCTGTTCTCAAAGAAGT AACTGAATCTGATGGTCAGACCATCCTTTTTATTGATGAGATTCATACAGTTGTTGGTGCAGGTGCTACAAATGGTGCTATGGATGCTGGTAATCTCTTA AAGCCTATGCTTGGTCGGGGGGAGCTGCGATGCATTGGCGCAACAACACTAGATGAGTATCGCAAGTATATCGAAAAGGACCCTGCACTAGAGCGTCGTT TCCAACAAGTTTATGTTGACCAACCTACAGTTGAAGATACCATTTCAATACTAAGGGGACTACGGGAAAGGTATGAGCTGCATCATGGTGTCCGAATTTC AGACAGTGCACTTGTGGAAGCTGCAATTCTCTCAGATCGATATATCAGTGGGAGATTTCTGCCTGACAAAGCTATTGATCTGGTTGATGAAGCAGCTGCT AAACTGAAAATGGAAATTACTTCCAAACCTACTGTACTTGATGAGATAAATCGGTCGGTCTTGAAACTAGAGATGGAGAGACTCTCTCTCACGAATGATA CAGATAAGGCTTCTAAAGATAGGTTAAGTCGTCTTGACGCAGAGCTATCTCTTTTAAAAGAAAAACAGGTTGAGCTGACTGAGCAATGGGAGCATGAAAA GTCTGTCATGACTCATATTCAATCAATTAAAGAAGAGATAGACAGGGTGAATCTTGAGATCCAACAGGCTGAGAGGGAGTATGATCTTAACCGTGCTGCG GAATTGAAGTATGGCAGTCTAAACTCGTTGCAGCGACAACTTGAAAGTGCAGAGAAGGAATTAGATGAATACATGAACTCTGGAAAGTCTATGCTGAGAG AAGAAGTTACCGAGAATGATATTGCTGAAATTGTAAGCAAATGGACGGGTATTCCAGTTTCGAAACTTCAACAGTCCGAGAGGGAGAAACTATTGTATTT AGAGCAAGTGCTCCATAAGCGTGTTGTAGGTCAAGACCCGGCTGTTAAGGCTGTAGCTGAAGCTATCCAACGTTCAAGAGCAGGTCTTTCAGATCCTCAT CGTCCCATTGCTAGCTTCATGTTTATGGGACCTACAGGTGTAGGAAAGACTGAGCTTGCTAAGGCCCTTGCTTCCTACTTGTTCAATACCGAAGAAGCAC TTGTACGAATTGATATGAGCGAGTACATGGAAAAACACGCTGTTTCAAGATTGATTGGGGCACCGCCTGGATATGTTGGGTATGAAGAGGGAGGGCAACT TACCGAGACAGTTCGTCGAAGACCATATGCTGTTATTTTGTTTGATGAGATTGAGAAGGCACACTCAGATGTATTCAATGTATTTCTTCAAATTTTGGAT GATGGAAGAGTAACTGACTCACAAGGTCGCACAGTGAGTTTTACTAACACTGTTATCATTATGACCTCAAATGTTGGATCACAGTATATTCTCAACACTG ATGATGACACTGTGCCGAGAGAGCTGGCTTACGAAACCATAAAACAACGGGTGATGGATGCCGCAAGATCCATCTTTCGCCCTGAATTCATGAATAGAGT TGATGAGTATATTGTCTTCCAACCTCTAGACCGTGACCAAATAAGTAACATTGTCAGATTACAGGTAATTGCTTGATTTCTATGTTCATATTGCTTGACA ATTCTTGTAAGGAGTTTATGTTAAGTTATTAGCAAAAATTACCAGCTTTTACTAAGCATTCTTGCTAGATTTGTAGGTTAGTGTTACATGGTAGTATCTC ACAACCCTGATTTCACTGTTTCCTTTTTTGTTATCTCGGATTTATTACAGTTGGAGCGGGTACAAAAACGAATCGCGGATCTCAAGATGAGAATCCAAGT GACAGATGCTGCTATCCAACTTCTTGGAAGTTTGGGGTATGACCCTAACTATGGTGCTAGGCCAGTCAAGAGAGTGATTCAGCAAAATGTGGAGAATGAA CTTGCCAAGGGTATTTTAAGAGGTGAATTTAAGGATGAAGATGCAATATTAATAGATACAGAACTCACACCATTTGGCAATGGTCAACTTCCACAACAAA AGCTTGTTTTTAAGAAACTTGAAGCTGATTCAAAATCTACAACTCAAGATAGCTTGGAAAGAGCACAGGCTCCTTGAATGCATTTTTCAGCATCTTATTT CTCCACGTAGAGCTAAGTTTCACACAGATACTAGTGTACATGATTTTCTTATATAGATTGAACAATGATCCTAGCATATTTAGAATCCAATATATAATAT ATTTATTGATCAATACAGTCTTAAGACTTGACAAAGGGTTGAAATTTTTTGCATGGTCACTTTTAGTCTAAC
• Tissue: pods
• Gene name: LI_gene_190948;
• Additional information: details;

Expression of Ll_transcript_304845

FPKM

• PAB: 0.1
• PNAB: 0.1
• PS1: 0
• PS2: 1
• PS3: 0.1
• PW1: 0
• PW2: 0
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_304845

• Blastp: Chaperone protein ClpB3, chloroplastic from Arabidopsis with 85.76% of identity
• Blastx: Chaperone protein ClpB3, chloroplastic from Arabidopsis with 87.23% of identity
• Eggnog: ATP-dependent CLP protease ATP-binding subunit(COG0542)
• Kegg: Link to kegg annotations (AT5G15450)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461454.1)
• Pfam: Clp amino terminal domain, pathogenicity island component (PF02861.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;