| Id Trinity | TRINITY_DN52212_c4_g2_i8 |
|---|---|
| Name Transcript | Ll_transcript_304831 |
| Sequence | CAATTAGAAGGTACTCGAAGTTTTTGGAACCTGCGTCATTACTCTATATTCTCACTCCTTCTTTTTCTTCTTCTCTTAATTCCTCACACAAATTCACATT TCTTCATTTCCCATTCTCGTCTTAGTTTCCACTCTCTGATCTCACTCTTTCATTTTCATCATCTTCATGGCTTCTACGACGTCGTTTTCATCTCTTTTCT TTTCTCACTCACTTCCTATTTCTAGTAACCGAAACCATCATCACAATCATATTTCCCTCGCTTTTTCCGCTAAACCCAGTTTTCCAAATACTCTCAAATC GTTACCGTTGAAGAAAAGATGCGTTTTTTCTAATGGGCTTCAGAGAAATTTAAGAAATTCTACTCGTTTCTCTGTTCGTTGTGAAGCATCCTCTAGTGGA AGGATTACACAGCAAGAGTTCACAGAAATGGCATGGCAGGCAATAGTTTCGTCACCAGAAGTGGCGAAGGAGAATAAGCATCAGATTGTGGAGACAGAGC ACTTGATGAAGGCTTTGTTGGAGCAGAAGAACGGACTTGCTCGCAGGATATTTTCCAAGGTCGGGGTTGATAACACTCGGCTTCTAGAAGCTACGGATAA GTACATTCAGAGACAACCCAAGGTGCTAGGAGAATCAGCTGGTTCAATGTTGGGGCGTGATTTGGAGGCATTGATTCAGAGAGCCAGGGACTACAAGAAG GAATATGAGGATTCATTTGTTTCAGTTGAGCACTTGGTTCTTGGATTTGCCCAAGATCAACGATTTGGGAAGCAGTTCTTTAAAGATTTTCAAATATCTC AGCAGGCTCTTAAATCTGCAATAGAGTCTGTTAGAGGACGCCAGTCAGTTATTGACCAGGATCCCGAAGGGAAGTATGAAGCCTTGGAAAAATATGGGAA AGATTTGACAGCAATGGCTAAAGCAGGAAAACTTGACCCAGTCATAGGAAGAGATGATGAAATACGTAGGTGCATCCAGATTCTGTCCAGAAGGACAAAG AACAATCCTGTCCTAATCGGTGAGCCTGGTGTTGGAAAGACTGCAATTTCTGAAGGACTTGCTCAGAGAATTGTTCAAGGAGATGTTCCTCAAGCTTTGA TGAACCGCAGGGTATGTGTTTTATCCATATACTTCGGTTACTCATCATAAATCTGAAAATGGGGAAGAAGGGATGATCACCAAATATAAGTAATTTGTTT TTAAGTTTCTATTCTCATTTTCAACAACTACAACAACCATGTTCTTCACTCCTAGATGGAGTCTGCATTATTCCAATTTTCAATTTCACTCTAATGAACC GTGTTGTATGCTCTATGCCATTCTTTTTTTGATTCCATTTTTTAATCAAATGTAATATTTATTTTATTCTCTTGGAAGTTTATCTATTGGCTTATAGCTG TAAATTTGAGCTTATAAACTTATCTCTTTTCAGCTTATATCGCTTGATATGGGTTCACTTATTGCTGGAGCAAAGTACCGGGGAGAATTTGAGGATAGGC TGAAAGCTGTTCTCAAAGAAGTAACTGAATCTGATGGTCAGACCATCCTTTTTATTGATGAGATTCATACAGTTGTTGGTGCAGGTAATAAATTTCAAAG CTCTCCATTTCGGATATTCCAAAAGCTGCATGTAGGCCTCCCCGATTCTATTAACTTTTGTTCTTCATACTCATTGAGTTAGATTGGTATATATACCGAA ACAGTTCAGAACAATGGTGATTCTGCTTGTAGAAGATGGCTCATTTTAACTTATATCTTTCTCCCTGAAAAATATGTCTTCTGTTTTTAGCTATTTGCCA AATTGAGATTTGAAATTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_190948; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_304831
| Blastp | Chaperone protein ClpB3, chloroplastic from Arabidopsis with 76.13% of identity |
|---|---|
| Blastx | Chaperone protein ClpB3, chloroplastic from Arabidopsis with 79.73% of identity |
| Eggnog | ATP-dependent CLP protease ATP-binding subunit(COG0542) |
| Kegg | Link to kegg annotations (AT5G15450) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461454.1) |
| Pfam | Clp amino terminal domain, pathogenicity island component (PF02861.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |