| Id Trinity | TRINITY_DN52219_c2_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_306002 |
| Sequence | GCCATTTCACACTTCCCCAATGTGTCGGTGGAGTCTTGTCTCCAATCCACTCTGTTCCACTTCAACACCTAACTCATTCATTCATCAATCAATCTCCACC GTCCATCACTCTCATTATTCATATTCACTAACACCATCTTCACTACACTTTTATCATCTTATAACATAATCATCATTCTCTCTCTTCTTCTTTCATTCAT TCACATTCACCAAAATGAACATAACCAAAACCATTCTCATTCTCACAACCCTTCTCTCTCTCTTCACAACCTTCATCAACTGTGATGAATCAAGCACCAA GGCCATTGTTAAGTACACTACGAAAGGGAAGAAGCTATGTGACAAAGGTTGGGAATGTAAAGGTTGGTCTATATATTGTTGTAACTTGACTATCACTGAT TACTTCCAAGTTTATCAATTTGAGAACTTGTTCTCTAAAAGGAACACACCATTGGCTCATGCTGTTGGGTTTTGGGATTTTCATTCTTTTATTAACGCTG CTTCACTTTATGAGCCATTGGGATTTGGAACTACTGGGAATAAGACTACGCAGATGATGGAGATTGCTGCTTTTCTTGGACATGTTGGAAGCAAGACATC TTGTGGTTATGGAGTTGCAACTGGAGGACCTTTGGCATGGGGTCTTTGTTACAATCATGAAATGAGTCCTAGTCAGAAATACTGTGATGATTATTACAAA CTCACTTACCCTTGTAATGCTGGTGCTGATTACTACGGACGCGGTGCTATACCCATTTACTGGTATCTACTTCACTCGTTTCATATCTTTCGATGTTTTA ACTTTTTTTATGTTATTACAAACTTTTTTTATATTTTAGTAGACATATGATTATACTTTACTTTCTAATTATACATTTATTTATTACTCCTATTTTTCCT CCCCTATTTCTCTATTTTTTTGAATTCAGTTTCCAATATGCATTCAACGAGTTTATCTTTGTCAAATTATATTCAGTTTTTACATCATTTATTGAGGTTA CATAATTGCTTTGAAAGCATAGTAGCATGATTTGTGTGACTACACTTATGTGTGTATCACAACATATATTTAAATTTGTGTATACATCATTTTGCTTGTT GAATTTGGAAGTTGTAAATTTGTTTTGTCAATATAGGAACTACAACTATGGTGCTGCTGGAGAATCATTGAAGATAGATCTACTAAGCCATCCAGAATAC ATAGAACAGAATGCAACCCTTGCCTTCCAGGCTGCAATTTGGAGATGGATGACGCCGATCAAAAAGTCACAGCCTTCCGCCCACGACGCCTTCGTCGGGA ACTGGAAGCCAAGCAAGAACGACACTCTGGAAAAGCGGGTTCCCGGCTTTGGCATTACAATGAACATTCTGTATGGAGATGGTGTTTGTGGACAAGGTGA TGTTGATCAAATGAACACCATTATTTCTCATTATCAGTATTATCTTGATCTTCTTGGTGTTGGTCGTGAAAAAGCTGGGCCCCATGAAACTCTTTCATGT GCTGAGCAGAAATCTTTCAACCCAATTACCAAAACTGCATCATCTTAAACTTAGATTAAATATTTATTAGCATATGATATTATTGTGCCAAAACCCTTCA ACAATGGCAAGTTAATAAGGGTTGTTAAAGTGATTATTGGTATGCAATATTTTTTAAATGTGTGGCAGTGTGTGGATTCTTATATAGTTTCACTTCCTTG TTATGTAAAAGTAAAATTAAGTGGATCAAGAGTGTAATATTTATGCAATTCTCATAATGTATTTAATATTAGTGTATAAATGTAACAAGAGAATAATAGA TCTACTCGTATCAGAAGATAATTTATCTCCTCTCGTCTATAAAAGTATGACATATGTACTATTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_191001; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_306002
| Blastp | Chitinase-like protein 1 from Arabidopsis with 76.69% of identity |
|---|---|
| Blastx | Chitinase-like protein 2 from Arabidopsis with 75.32% of identity |
| Eggnog | chitinase(COG3979) |
| Kegg | Link to kegg annotations (AT1G05850) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419595.1) |
| Pfam | Chitinase class I (PF00182.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |