| Id Trinity | TRINITY_DN52225_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_304613 |
| Sequence | GTCCAGGCCAATAATTGAATGAAAAATCAATAAATAATAGACGCAGTCGTAACTGAGCATGAAGAGAAGATATCTCTGAGTTTTGATTGAACTCTATCGC AAACGAAACGCTGTCGTTGAATACGGAAAAAGCAAGAGAACGCTACTCATAGATCTAATCCATTCATCACCATGGATCAACACCATTCTCATCACTTCCA CCGTGCAAGGTACGCTCCTCTTTCTTCTCAACACCACCACCACCACCATCACAACCCTAACCACCTTCCTCCGCCACCGTCACTCCCTCCTCCTCCACCA CCACCCCAACAACCTCATCCCTCATCTTACCCTCCTCAGTTCCATCCTAATCATCCTGTCCATATATCGAACAGTCATAACCACCACAATCATCTTCCTC GTCGTTCTTTCTCTGATTTTGACCAATCTTCTTGGAACCCTAACCCTAGGGATGTTTCTGAGAATCGTCCTCCGCGGAATTACTCTCCGGTTGATTTTGA CCGTCAATTGCATCACCGTCCGGTGGAACGTGTGCTTCCACCGCCGCCGCCACTGCCGCAATATCAGCCGATTGATAACCGAAGGTATGATCGAGAGGAT GGGAGTTCTAGGTTGAGAATGGAGCGTATGGATGTATATGAGTCAAAACCTAGGGAGAGGGAGAGGGAAGAGTTTGTGTGGAGTCGGGGTGGTGAAGGAA ATTACCATCAAAGGGATTTTGGACCGAAATATGATTCGCCAAGTCAGAGTGTGAGGGATATGGATGTCGATTTGAAGCCTGAGGGTTATGTTCGTGTGTT TAATGTAGAAGGTGAGGTTGAAGTAACTAGGGGTGATAGAAGAGATGTTATTGGTGAAAGTAAGAGGTGGGTCAATGATAGGCAGGGACCAAGAGAATTG CGTGATTCATCGAAGAATGAGATTGGTGTGGCTGGGAATAAGAATGGTTTTCAGATAGTGTCTGGGAAAAGAGATTATTATGGAAACGAATTGGGTAGGT ACAATAGTAGAGGGAACATCAGGGAGGGTGCTCGTGAATTTACTCGCACTTCTCCGCACAAACAGATACAGAAGAAGAGTGCTCTACTTAGGCTTCAGAC GGTAAAACCGAATCATAGGAACCGCGAGAATGAGCAGTTACGCTATGCTGCTGAAATTAACTCTAGTTTCATCAGGGGTAAGGAGCAACATCAAGCTGAA AATAACTCTAATTACTTCAGGGGAAAGGAGCAATATGGTTATGGGCATGGGGTGAAAGCTGAAGAGAGGAAAGGAAGTCCTGTTGAGCTTGATATTTCCT TTGAATCAAATTCTCTGGTGGCCAAGGCTATAGTGGCACCTTCAAGTTCTGCTGTTGTTTGTGATACAAATATGAATCCAGTTTCTGACACAGATATGTG TTCTGCAGAAAAGAGGAGAAAGGTTTCGGTCTCTGACAGTGATCGTTCTGGTTTACCAACAGCAAAACTGTCTGCTGGTTCTGCAAGGTTAGGTAGCTCA CCAGGCAAAGCAAATGACACCTCTAGTTCTGCCAAGGACTTGAGCTCACAGAAGTATGTTTCTGATACTTGTTCTCCTCCATGCACCATTGTGGCCGATA ATTCATACGGTAAAAATGTGGCAACACTTCCAAATGTAACTACTAATGTTTGTGCTGAGAAACCATCCACAGTGATTGTGAAGAAGAAAAAAATTGTTAA AAGAGTAGTGAAGAAAGTTGTCAAAAATCCTAATTCAACTGTGTCACATTCACCTTCAGCAAATACACATCATGGAACTGTGCAAACAGATAGTCTCACT TTTAAATTACCAAATTCTCCTGCTCCAGACAAAATAGAAACTTCCTTGAAGGAGAAAAGTACCACTGTTGACAAGGTGTCCGTAACAGACTGTTTGCACT CTTTACCAAATGAAGGGAATGTATTGCCTGAAGATATGAAGGAAGGTTTATCCCCACTGAGTTTGGGGTCACATTCCAGGTCACAGGAATGTAAGACTGA TGGAGATTCTGATATTGGTAAATTAGCCAGGTTTGAAGGCAATGGAAATATTTCAAATTCCCCATCCCATGTTTCTTCTAGTATTGATGATAAACAAAGT GATTTTGATTGTTTAGTTGCAAATAATTCTGCCCGTGACTTGCTTAGCATACCAAATATTGACGAAGTTACTACATCATTAAATGGTATTACGTCTGAAA TCAACGACATGGTTTATGATAATAAGCAATTATGCCAGAATGAAGTGTCTCTATCACTTGTTAACTATCCAAATATAGGACGCCCACAAAATAGTTATCT CGTAGATGTAGTGGATGAAATGAATTGCAGATTGGTTTGTTCTTCTGATAATATAGTTAACACTGATCTTATAAATACATGTGATTCTGCAAATGATAGG GTTTATTGCTTGAATACCAATTATCTTACAGGTTCAGAAAAGGATCATACAGGTTCAGTAGAAAATTTTACAGTTTCTGAGTGTGGCAATGATGGCATTG TTGGTAAGGCATATTGTGAAAATAAGGCCCCCACAATCACTCAAAATGCCATTTCAGAAGAAAATCCAGATAAAGCTGTGCCAAGTAGTGGAATGATTGC TATTATTGAGTTCAGGAAACACTGAGATTGAAGAAGGTCCAAACTGCATACAACACGCTAGTGTACTGAGACAGGGTTCCGATAATGAATCAGCTAATTC AGAAGATAGTATCACTGTTCACTGTTTTAATACTGGAAAACTGGTGCCTCCCAGTGATGCCACCAAATCCCCTGAGAATTGTGACGACACAGAAGAAGCA TTGTCAAATTTGAAAATTTCTGTGGCATTTGAAGGAAATACAAATAAGATAAAAGAAAGAGAAGTTAAGACTCATTTAAATATTTTGAGTTCAAAGATGG AGGGCGTATCTACTGACCCAATAAATCCAGATAGCTATGCAACTGATGTTGATATAGCCCCAAATTTCTTGAAAAATCCAAGTCCTTCACAAGATTTAGA TCAATCAGTTCAAAGCTTAGATTTTAATTCCAAACCCAGTGCAGATGAGGTCACTGCTCTACATGGGAAACTAGAGGTTTCTGAAGCTGAATGCTACATT GAAAATAATGTCAATGATGATGCAAATAACGTTTCACAAGTTTCTAAAAGGAAAAAACTAAAAGAAGTCACTGCTGGACACCCGAGATTCAGCGATGCGA TTGTGGTCACTACATCTTCTGCAGATGTTCCCACCAGTTTCAGTGATAACCAAGCAAGTGCATTGTCAAGCATGAGTACTCTATCAATTGCCCAGTCAAT ACCTTATTCAGAGGATATCACTAAATTACCTAACAATATTTTAGTTGGAGGTTCTTTTGATTCTATTGATGCAGATAGGGAAATCGTAAGTTCTGAGCAT TTGGAATTACAGCACATAGACATTGCCTCTTATTCACTGTGTGAGAATGTAGCCATTGTAAATGTTCAGTTCTCGATGTTGCAAGGTGAGCCAAAGGAAA ATAGTATTCCAATTCTGCCTATAAGTAGTACTCAAACTGACACTTCAATCATTGAAAACATTGAGGGAGAAAAGACTGTTGAAGAAAATTACCAATATAG AGGCCTCGTTCAAATAGCTCCAAGTGCTGATATGGAATCTAATGATCTCAATATGGAATATAATGATCTCAACATGAACGGGGATTTACTACCTCAGCAG AACCTCATGTCCTGTCCTACCAATGGTGATGGAGTCAACACTATTAATTCTGATGAATTGATTGAGGATGTGCCTGATGCACTATCAAATATGTGTTCTA AAGGGATAGCATCTGAAGATTATTCTAAAGTTAAAACTCAGGGTCTGAATTCATATGATTCAGAATTAAACGGGGGCAAAAATCAGGCAGGTGGTATCAT TCCTAAAATTTCCCAAGGTCTTTCTTTCACCCTTTCAAAGACAAAGTCAAAGACAAAGACATCTGCCTCTTCAACCCATATATCAAAACCTCGAACTTGG CATCGTGCATTAAATACTTCTGCTTCTCTACCTGAAATCAAGCCTTTGGTAGCAACAGTTCCTCCCAGAGGGCCAATTTTAGAAAGGAAAGGGAATTTTC AAAAGACCTCTTACATTCGTAAAGGTAATAGTCTCGTTAGGAAACCTTCTCCTTTTTCTGCTTCACCTCAAATCTCCTCTGCTAAGCAGTCAACTTCCTT TGGCTTACACGAATTACCAAAAAGCACCAGACCTGAAAGGCAAGTTGATGTGATAGGACCAATCTTGAAAGCAGGAGTGACAAATGCTCCTCAGCAGAGG CAGAGAACACCTCCAGCACCTATTAACACCATGTCAGAGGAAAATATGTCCCCCCCACTGGTTGGACCTCCTTCCAGTGTTTGCTATGATGCACCAAACT CTTGTGAAAATGCAACTAAGCATTATGAAACTCCCATTGTTCAAACTGGCCCAGCAAATAATGAGGAGAGCCAAGTTGAAGCCAATGATGAAAATTTTTC TTCTTTGAACGCGAAGAAAGTAGTATACATAAAGCCCAAAACAAATAAATTGGTTGCAACTTCGACTCCTCATGATGTTTCTGTTTCTACTGATGACAAG GCTCAAACAACCTTCTCTGATGGGTACTACAAGAGGAGCAAAAATCAGTTAGTTAGGACTACATTTGAAAGTCGTATCAACCAAACAGTTGCATTGCCTA ACAGCACTGTAAATTCTGATGGACAAGTGGCTCGTAAGGTTCTTTGCAACAGGAGATTTAGTAAGAGACGGTCACATAAGGTTGCTGGGAGCTCCTGCAA ACCTTTAAGAGCCTCATTGGTGTGGACACTTAGAGGGGGAAATTCTTCCAAAAATGACAGTGACTCACGGTATTATCGAAAGGTTTTACCTCATTTGTTT CCATGGAAAAGAGCAACATATTTAAGAGGTTTTGTTATTAATTACGCTTCAAGTTCCAACCGTAGTTCCTTATCTGCAATCAGCAAGAAATTGCTTCTAT TGAGAAAGAGGGATACTGTTTACACTAGGTCGAACCATGGGTTTTCTCTTTGGAAATCCAAGGTATTGGGTGTTGGTGGGTCTAGTTTAAAATGGTCAAA ATCCATAGAGAAGCACTCGAAGCAAGCAAATGAGGAAGCCACACTCGCTGTTGCTGCGGTAGAGAGGAAAAAGAGAGAGCAGGAAGATGTGGCTTTCATT GGTTCTCAGGCAAAGAGTAGGAACCAATCTTTCCATGAGTGTCTGTGATAATTATAATGCTGTAGACTATTTGTTTTTGTGCTATTAAAACTTATTTATG CTCCATGTATTCATTATCTTTGTTACTCTGACTTTGAAAGAAGTGGTTGATTGTATAGGAGAGCGCATATTTCGTATTGGTTCAGTTCGTTACAGAATGG ATCCTTCCAGGCGGACACTTCAGAGGATTTCAGGTTGTCTACATTTTTATCTAAACCATTGTACTTGGGTCTTGCATCAGTCTCTACATTTCTTAATATG TTTTGTTTGTCAAATGGATACATGTTTTTGGGACATTGGCTCCCATATTTTAGACAGTGGACACATTTTCACATATTTTAGATGAAAATTTTGCAACTTA TATATGTACTGAAAATTGATATCATGGATCAACTACTAGCTTGTTGATTGTTAAACCTTCGAGTGATTGATAATGTTCTTTTGGAATAATGCCATCTCTG ATCGCTTAAGGTCAAGTTTGTAGGTATGATGTTCTGTTGCCAATTGGATACATTTTCGTATGTTTAGATATTTATCATTGATGAAGTAGGGTATTAGAGT AATGTTTTCAGGTTAGATTAGTAATCTGTAATTTATGCTTGCAACTTAGTTTATAATGCTTCTTGCTGAATTGTGATTGTTGAACTTTTGAATGTTTTTT GGAAATGATGACTTCTTCTCCTGCCATCTAAGGACAAATTTGTAAGGTATTATGGTTTCGGAGGAAAAAATGTATTAAGATATAAAGGATATAAATTCCT CCTTTGAACAAAAAGTCATCAACTAGCAGTGCTTGTCAGTTAGCTACTTTGCTTATCAAACAAAGGATAAGAAATCATCCTTAGAACCAAACACATCAAG TTATCAACGAAGCAGTGCTTGTCAGTTGTTAGCTACTTTGTTTGTCAAACAAACAATCTTTTTGAAATAGCCATTAGGTGAGTACTATGAAGATGCTAAG AGAACCAATTTACCCCATGGGAGAGGCTGCAGCAGTACTGGCCATTCCTTCTTTTCTCAAGCATCAAATTAAACATACATCACACACCTCCAATTTGCTT TTCCCTTTTCAGTCCAAAGCTTTCTGAATTCGTAGTTAAATGTTTGCTCCCAGATATTGTGTGAAGAACAATCAATTCAACCATTATGATTTTTTCAGAT CAATTTCTAAACATTATCCTTTTCACTGTTGCCAATGTGATGTGGAGATGCTGGAAGAAAATGCAAATGTATAATT BLAST |
| Tissue | pods |
| Gene name | LI_gene_191046; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_304613
| Blastp | Uncharacterized protein At1g21580 from Arabidopsis with 36.67% of identity |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 7 from Arabidopsis with 50.77% of identity |
| Eggnog | zinc finger(COG5084) |
| Kegg | Link to kegg annotations (AT1G21580) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430453.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |