Id Trinity | TRINITY_DN52225_c2_g1_i3 |
---|---|
Name Transcript | Ll_transcript_304615 |
Sequence | TGGAGATATTTTGACAGGCATGACAACCATATGTTATCCTGTCCCGCCTTTCACACCAAGCTGCATCCGCCAACCAACCTCCTCCCTCCGCCGTCAATCT CACTCTCCTCCACCATCCCTCTCTCTCTCCACCGCTCACGCCACCACTTCCACCACCACACTCCTCCCACTCCCTCCTCCTCCACCACCACCCCAACAAC CTCATCCCTCATCTTACCCTCCTCAGTTCCATCCTAATCATCCTGTCCATATATCGAACAGTCATAACCACCACAATCATCTTCCTCGTCGTTCTTTCTC TGATTTTGACCAATCTTCTTGGAACCCTAACCCTAGGGATGTTTCTGAGAATCGTCCTCCGCGGAATTACTCTCCGGTTGATTTTGACCGTCAATTGCAT CACCGTCCGGTGGAACGTGTGCTTCCACCGCCGCCGCCACTGCCGCAATATCAGCCGATTGATAACCGAAGGTATGATCGAGAGGATGGGAGTTCTAGGT TGAGAATGGAGCGTATGGATGTATATGAGTCAAAACCTAGGGAGAGGGAGAGGGAAGAGTTTGTGTGGAGTCGGGGTGGTGAAGGAAATTACCATCAAAG GGATTTTGGACCGAAATATGATTCGCCAAGTCAGAGTGTGAGGGATATGGATGTCGATTTGAAGCCTGAGGGTTATGTTCGTGTGTTTAATGTAGAAGGT GAGGTTGAAGTAACTAGGGGTGATAGAAGAGATGTTATTGGTGAAAGTAAGAGGTGGGTCAATGATAGGCAGGGACCAAGAGAATTGCGTGATTCATCGA AGAATGAGATTGGTGTGGCTGGGAATAAGAATGGTTTTCAGATAGTGTCTGGGAAAAGAGATTATTATGGAAACGAATTGGGTAGGTACAATAGTAGAGG GAACATCAGGGAGGGTGCTCGTGAATTTACTCGCACTTCTCCGCACAAACAGATACAGAAGAAGAGTGCTCTACTTAGGCTTCAGACGGTAAAACCGAAT CATAGGAACCGCGAGAATGAGCAGTTACGCTATGCTGCTGAAATTAACTCTAGTTTCATCAGGGGTAAGGAGCAACATCAAGCTGAAAATAACTCTAATT ACTTCAGGGGAAAGGAGCAATATGGTTATGGGCATGGGGTGAAAGCTGAAGAGAGGAAAGGAAGTCCTGTTGAGCTTGATATTTCCTTTGAATCAAATTC TCTGGTGGCCAAGGCTATAGTGGCACCTTCAAGTTCTGCTGTTGTTTGTGATACAAATATGAATCCAGTTTCTGACACAGATATGTGTTCTGCAGAAAAG AGGAGAAAGGTTTCGGTCTCTGACAGTGATCGTTCTGGTTTACCAACAGCAAAACTGTCTGCTGGTTCTGCAAGGTTAGGTAGCTCACCAGGCAAAGCAA ATGACACCTCTAGTTCTGCCAAGGACTTGAGCTCACAGAAGTATGTTTCTGATACTTGTTCTCCTCCATGCACCATTGTGGCCGATAATTCATACGGTAA AAATGTGGCAACACTTCCAAATGTAACTACTAATGTTTGTGCTGAGAAACCATCCACAGTGATTGTGAAGAAGAAAAAAATTGTTAAAAGAGTAGTGAAG AAAGTTGTCAAAAATCCTAATTCAACTGTGTCACATTCACCTTCAGCAAATACACATCATGGAACTGTGCAAACAGATAGTCTCACTTTTAAATTACCAA ATTCTCCTGCTCCAGACAAAATAGAAACTTCCTTGAAGGAGAAAAGTACCACTGTTGACAAGGTGTCCGTAACAGACTGTTTGCACTCTTTACCAAATGA AGGGAATGTATTGCCTGAAGATATGAAGGAAGGTTTATCCCCACTGAGTTTGGGGTCACATTCCAGGTCACAGGAATGTAAGACTGATGGAGATTCTGAT ATTGGTAAATTAGCCAGGTTTGAAGGCAATGGAAATATTTCAAATTCCCCATCCCATGTTTCTTCTAGTATTGATGATAAACAAAGTGATTTTGATTGTT TAGTTGCAAATAATTCTGCCCGTGACTTGCTTAGCATACCAAATATTGACGAAGTTACTACATCATTAAATGGTATTACGTCTGAAATCAACGACATGGT TTATGATAATAAGCAATTATGCCAGAATGAAGTGTCTCTATCACTTGTTAACTATCCAAATATAGGACGCCCACAAAATAGTTATCTCGTAGATGTAGTG GATGAAATGAATTGCAGATTGGTTTGTTCTTCTGATAATATAGTTAACACTGATCTTATAAATACATGTGATTCTGCAAATGATAGGGTTTATTGCTTGA ATACCAATTATCTTACAGGTTCAGAAAAGGATCATACAGGTTCAGTAGAAAATTTTACAGTTTCTGAGTGTGGCAATGATGGCATTGTTGGTAAGGCATA TTGTGAAAATAAGGCCCCCACAATCACTCAAAATGCCATTTCAGAAGAAAATCCAGATAAAGCTGTGCCAAGTAGTGGAATGATTGCTATTTTGAGTTCA GGAAACACTGAGATTGAAGAAGGTCCAAACTGCATACAACACGCTAGTGTACTGAGACAGGGTTCCGATAATGAATCAGCTAATTCAGAAGATAGTATCA CTGTTCACTGTTTTAATACTGGAAAACTGGTGCCTCCCAGTGATGCCACCAAATCCCCTGAGAATTGTGACGACACAGAAGAAGCATTGTCAAATTTGAA AATTTCTGTGGCATTTGAAGGAAATACAAATAAGATAAAAGAAAGAGAAGTTAAGACTCATTTAAATATTTTGAGTTCAAAGATGGAGGGCGTATCTACT GACCCAATAAATCCAGATAGCTATGCAACTGATGTTGATATAGCCCCAAATTTCTTGAAAAATCCAAGTCCTTCACAAGATTTAGATCAATCAGTTCAAA GCTTAGATTTTAATTCCAAACCCAGTGCAGATGAGGTCACTGCTCTACATGGGAAACTAGAGGTTTCTGAAGCTGAATGCTACATTGAAAATAATGTCAA TGATGATGCAAATAACGTTTCACAAGTTTCTAAAAGGAAAAAACTAAAAGAAGTCACTGCTGGACACCCGAGATTCAGCGATGCGATTGTGGTCACTACA TCTTCTGCAGATGTTCCCACCAGTTTCAGTGATAACCAAGCAAGTGCATTGTCAAGCATGAGTACTCTATCAATTGCCCAGTCAATACCTTATTCAGAGG ATATCACTAAATTACCTAACAATATTTTAGTTGGAGGTTCTTTTGATTCTATTGATGCAGATAGGGAAATCGTAAGTTCTGAGCATTTGGAATTACAGCA CATAGACATTGCCTCTTATTCACTGTGTGAGAATGTAGCCATTGTAAATGTTCAGTTCTCGATGTTGCAAGGTGAGCCAAAGGAAAATAGTATTCCAATT CTGCCTATAAGTAGTACTCAAACTGACACTTCAATCATTGAAAACATTGAGGGAGAAAAGACTGTTGAAGAAAATTACCAATATAGAGGCCTCGTTCAAA TAGCTCCAAGTGCTGATATGGAATCTAATGATCTCAATATGGAATATAATGATCTCAACATGAACGGGGATTTACTACCTCAGCAGAACCTCATGTCCTG TCCTACCAATGGTGATGGAGTCAACACTATTAATTCTGATGAATTGATTGAGGATGTGCCTGATGCACTATCAAATATGTGTTCTAAAGGGATAGCATCT GAAGATTATTCTAAAGTTAAAACTCAGGGTCTGAATTCATATGATTCAGAATTAAACGGGGGCAAAAATCAGGCAGGTGGTATCATTCCTAAAATTTCCC AAGGTCTTTCTTTCACCCTTTCAAAGACAAAGTCAAAGACAAAGACATCTGCCTCTTCAACCCATATATCAAAACCTCGAACTTGGCATCGTGCATTAAA TACTTCTGCTTCTCTACCTGAAATCAAGCCTTTGGTAGCAACAGTTCCTCCCAGAGGGCCAATTTTAGAAAGGAAAGGGAATTTTCAAAAGACCTCTTAC ATTCGTAAAGGTAATAGTCTCGTTAGGAAACCTTCTCCTTTTTCTGCTTCACCTCAAATCTCCTCTGCTAAGCAGTCAACTTCCTTTGGCTTACACGAAT TACCAAAAAGCACCAGACCTGAAAGGCAAGTTGATGTGATAGGACCAATCTTGAAAGCAGGAGTGACAAATGCTCCTCAGCAGAGGCAGAGAACACCTCC AGCACCTATTAACACCATGTCAGAGGAAAATATGTCCCCCCCACTGGTTGGACCTCCTTCCAGTGTTTGCTATGATGCACCAAACTCTTGTGAAAATGCA ACTAAGCATTATGAAACTCCCATTGTTCAAACTGGCCCAGCAAATAATGAGGAGAGCCAAGTTGAAGCCAATGATGAAAATTTTTCTTCTTTGAACGCGA AGAAAGTAGTATACATAAAGCCCAAAACAAATAAATTGGTTGCAACTTCGACTCCTCATGATGTTTCTGTTTCTACTGATGACAAGGCTCAAACAACCTT CTCTGATGGGTACTACAAGAGGAGCAAAAATCAGTTAGTTAGGACTACATTTGAAAGTCGTATCAACCAAACAGTTGCATTGCCTAACAGCACTGTAAAT TCTGATGGACAAGTGGCTCGTAAGGTTCTTTGCAACAGGAGATTTAGTAAGAGACGGTCACATAAGGTTGCTGGGAGCTCCTGCAAACCTTTAAGAGCCT CATTGGTGTGGACACTTAGAGGGGGAAATTCTTCCAAAAATGACAGTGACTCACGGTATTATCGAAAGGTTTTACCTCATTTGTTTCCATGGAAAAGAGC AACATATTTAAGAGGTTTTGTTAATAATTACGCTTCAAGTTCCAACCGTAGTTCCTTATCTGCAATCAGCAAGAAATTGCTTCTATTGAGAAAGAGGGAT ACTGTTTACACTAGGTCGAACCATGGGTTTTCTCTTTGGAAATCCAAGGTATTGGGTGTTGGTGGGTCTAGTTTAAAATGGTCAAAATCCATAGAGAAGC ACTCGAAGCAAGCAAATGAGGAAGCCACACTCGCTGTTGCTGCGGTAGAGAGGAAAAAGAGAGAGCAGGAAGATGTGGCTTTCATTGGTTCTCAGGCAAA GAGTAGGAACCAATCTTTCCATGAGTGTCTGTGATAATTATAATGCTGTAGACTATTTGTTTTTGTGCTATTAAAACTTATTTATGCTCCATGTATTCAT TATCTTTGTTACTCTGACTTTGAAAGAAGTGGTTGATTGTATAGGAGAGCGCATATTTCGTATTGGTTCAGTTCGTTACAGAATGGATCCTTCCAGGCGG ACACTTCAGAGGATTTCAGGTTGTCTACATTTTTATCTAAACCATTGTACTTGGGTCTTGCATCAGTCTCTACATTTCTTAATATGTTTTGTTTGTCAAA TGGATACATGTTTTTGGGACATTGGCTCCCATATTTTAGACAGTGGACACATTTTCACATATTTTAGATGAAAATTTTGCAACTTATATATGTACTGAAA ATTGATATCATGGATCAACTACTAGCTTGTTGATTGTTAAACCTTCGAGTGATTGATAATGTTCTTTTGGAATAATGCCATCTCTGATCGCTTAAGGTCA AGTTTGTAGGTATGATGTTCTGTTGCCAATTGGATACATTTTCGTATGTTTAGATATTTATCATTGATGAAGTAGGGTATTAGAGTAATGTTTTCAGGTT AGATTAGTAATCTGTAATTTATGCTTGCAACTTAGTTTATAATGCTTCTTGCTGAATTGTGATTGTTGAACTTTTGAATGTTTTTTGGAAATGATGACTT CTTCTCCTGCCATCTAAGGACAAATTTGTAAGGTATTATGGTTTCGGAGGAAAAAATGTATTAAGATATAAAGGATATAAATTCCTCCTTTGAACAAAAA GTCATCAACTAGCAGTGCTTGTCAGTTAGCTACTTTGCTTATCAAACAAAGGATAAGAAATCATCCTTAGAACCAAACACATCAAGTTATCAACGAAGCA GTGCTTGTCAGTTGTTAGCTACTTTGTTTGTCAAACAAACAATCTTTTTGAAATAGCCATTAGGTGAGTACTATGAAGATGCTAAGAGAACCAATTTACC CCATGGGAGAGGCTGCAGCAGTACTGGCCATTCCTTCTTTTCTCAAGCATCAAATTAAACATACATCACACACCTCCAATTTGCTTTTCCCTTTTCAGTC CAAAGCTTTCTGAATTCGTTAGTTAAATGTTTGCTCCCAGATATTGTGTGAAGAACAATCAATTCAACCATTATGATTTTTTCAGATCAATTTCTAAACA TTATCCTTTTCACTGTTGCCAATGTGATGTGGAGATGCTGGAAGAAAATGCAAATGTATAATTCTTCCAACCTCCAGTTTTTCTCATCGTTGATTTTCTA TACAATAGAGCAAAACTGCAAATCAATTAGTCTTTGTTTAGAGTTTTGATTTCCTGTTTAGACAAGGTTGGGGTCTGGATTTAAATTCTGAAATCATTAA GCTCCTTTCTTTTGTTGGCCATGCTAGGACTATACTTTAGAATTATGACCTTCATTTCTTCATTTTGTTTTCTTCTTTTGCTGTTATTATATTATCTGGA AGGAGACACTAGGTGAATGTAGAGCCTTTGGACAAAGGATAAAGAATTATGGTGGTGGGGCAAAAATGTCCAAGGCAAAGTTAAGGTGAAAAGGGAATGT TATAAAACATGGTCCTTGTGTAAAAATACAGAAAGTTGGAAAAAATACAAGACAACAAAGAAAGGCACCAAGAAAACAGTGTGTGGAGCAAGAGATAGAG CATATGATGGGTTAGACAAATCTCTAGGTACCAGGGAGGGGAAAGCATTAGGCCTACAAAGGGTAGGGAAAGAAAGACAAGGGATTTGGAGCAAGCGAAA TACATTAAAATGAAGAGGGGAAAGCCTTGATGAAGGACAAATATATTAAGAAAAGATGGAAGAACTATTTTCACAAGCTTTTCAATGACATCCATGATTC TTTGCATTGTAATAGGCTAAACACGAACGAGAAAAATCAAAAGTACATTTTACTATGGAATTCATGATAGAGCATTATGATGTCGTTAGGTCGATGTTGC TGAGCCCACCTTGTGGGACTAAGGCTTGGTTGTTGCAATTTTCTTTTCTCCTTGCTAGTTCACAGGTTCCATCACTATGTTGGTCTTACAAAGTTTTGCT TAATGTTCTTTGTAGATGGTGAACCCCTGTCCTCTGCTTCTGTTCCTTCAGGTTTGACTGCCAAAAGAGCTTACATTCCAAGGAGATTAGTTATTGGAAA TGATGAATATGTCCGAATTGGCAATGGTAACCAGCTTATTAGAGACCCAAAGAAGAGAACTCGGAAATTGGCAAATGAAAAAGTTAGATGGAGTTTGCAC ACTGCCAGACAGCGGCTGACTCGGAAGCAGAAGTATTGTCAGTTTTTTACTAGATTTGGGAAATGTAACAAGGATGGTGGCAAGTGTCCTTATATTCACG ATCCCACAAAAATTGCTGTCTGTACTAAGTTCCTAAATGGTTTATGTTCTACTCCCAACTGCACATTGACTCATAAGGTTTTGAGAAATATCGGGTCAAA GGAACTCAATGTGGTCTACTGCATTTACTGATCTGTCTAAACTCTAAGGTTGATTTTTGTGTGCAGGTTATCCCGGAGAGAATGCCAGATTGTTCTTATT TTTTGCAAGGCTTATGCTCAAACAGAGATTGCCCCTATAGACATGTCAATGTGAACCCTAAGGCTTCTATCTGTGAGGGATTTCTTAAGGGTTATTGTGC TGATGGGAATGAGGTATTTAACCACATTTTAATTTCTTGTCGACTTTCCACATAATTTGACAATTAAATTTCCCTCCTTTTATTGCAATTAAGTAAATCC ATTTCCGGTCATATGAATGTTCACATCATTACACTATGATATCTAAAGAATGGTGTCTTTACTTTTTTTGTGATGAGTTGTAGTAGTTATGGTATGGTAG TAATCGGGTTCTACAATGTTGATGTACTTCATCAAATTGAGTTTTGTATGCCTTGTCAATTTCAGCATGTAGCCCTTCCTCTGATTGTTTCTAAGTCGGA TGATGTTTTGTAATACTGCTGATATTGTTTTATTGACTTTGATTTCCAATAAATTTATTGTCATTCACTCGCACTAATATCTCAGTGTCAGAAGAAGCAT AGCTATGTCTGTCCTACTTTTGAAGCAACACGAACCTGTAGTCATGGAACCAAATGCAAGCTTCACCACCCCGTAAGACAAAGTAAGGGAAAGAGAAGGA AGAGATCCGAAGATCAGAATAGCAGAAGACGTTACTTTGGTTCTAGTCCGATTCATGTTTCTGAACCTGGGATGATGGTGGCTCCAAGGCAATGTCAACC GTATGGTGTTATAGAACTTCCTGACTACATTGGCCTTGGTGTAGATGTTGACAAAGAAGTTGCAGAAAGTGTTGATCAATCATTTGAACAAGCAATGTTG BLAST |
Tissue | pods |
Gene name | LI_gene_191046; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_304615
Blastp | Zinc finger CCCH domain-containing protein 7 from Arabidopsis with 51.52% of identity |
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Blastx | Zinc finger CCCH domain-containing protein 7 from Arabidopsis with 71.09% of identity |
Eggnog | zinc finger(COG5084) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019430453.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |