Id Trinity | TRINITY_DN52225_c2_g1_i5 |
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Name Transcript | Ll_transcript_304617 |
Sequence | TTTTTCTGTTAGATAGTCAAACTTTTGGAAACACTAAATAATACAAAAAAAGATTTGATTGATAAGAATGTAGGAGAGAGAATGACTGAATCACATCATA TTGAATCCTAATGAACCTTACTGGTTTCCTATCAGCTTTGATTAGACGCTGTCGTAGAAACATATTCAATCCCGAACTTGACACAGTGTCATCGCCGTCG TGCATCTAATCCATTCGCCACCATCATCAACCATGGATCAACATCACTCCCATCACTACCTCCGCACGAAGTATGCTCCTACCTTTTCCCATCATCACAA CCCTAATCACCTCCCTCCGCCGCCGCAACAACCTTCTCACCCTCACCTCTCTTCCTACCGCACCACTGCTTCCGCTCCCTACCGCAATAACAACTACCCT CCTCAATTTGCTCCCAACTATCCTATCCAACAAGATCGCCCTATCTCTAATAACCACCACCACCCTCACTCCTGTCCCAATTCCCATAGTTTCTCCGATA ACAACGACCTTCCTCGCCGCGCATTACTCCATTTCGATCAATCCTCCTGGAACCCTAACCCTAGAGTCACTTCTGAAAACCGTCATCCGAGGAATTACTC TCAGGTGGATTTTGACATGGAATTGCATCACCGTCTGGTGGATCGTTTGCCGCCACCACCACCACTGCCACCACTGTATCGACCGATAGATAACCTTCAG TTTGATCATGATGATGGGAGTTCCAGGTTGAGAATGGAACATATGGATTTGTATGAGTCTAACCCCAGAGAAAGAGAGAGGGAAGAGTCTGTGTGGGGTC GAGGTGGTAATGGAAACCACCATCCCAGTGATTTTGAACCGAAATATGATTCGCCGAGTCAGCAGGGTATGAGGGGTGTTGATGTTGGTTTGAAACCAGA GGGTTATGTTCGTGTGTATGACGTGGAAAGCGAGGTTGAAGTATCTAGGGGTGACAGTGGCATAAGAGATGGAGGACATGGTGAAAGCAAGAGGTGGGTG AATGAGAGGAATGAACCAAGAGTTTTGCGTGAGTATCCATCGTTTGAATTTGGAAAGAATGAGATTGGTGCTGCTGGAAGAAATGGAAATAATTTTCGGA TAGTGTGGAAAAGTGATTATTATGGCAATGAACTGGGTAAATACAATAGTAGAGGGAACATCAGGGAGGGTGCTCATGAATTTACTCGCACTTCTCCGGA AAAACAGATACAGAAGAAGAGTGCTCTTCTTAGGCTTCAGACGGTTAAACCTAATCGTAAGAATCGTGAAAATGAGAGGTTGTGTTATACTGGCTATGCT GCTGAAATTAACTCTAATTTCTTCAGGGGTAAGGAGCAACATGGGTACTTAGGTCGTGGGCATGGGGTAAAAGCTGAAGAGAGGGAAGAGAGAAAAGGAA GTCCTGTTGAGCTTGATATTTCTTTCGAATCAAATTCTCTGGTGGCCAAGGCTATAGTGCCACCTTCAAGTTCGGCTGTTGTTTGTGATACAAATATGAC TACAGTTTCTTATACAGATATGTGTTCTACAGAAAGGAGGAAAAAGGTTTCGGTCTCTGAGAGTGATTGTTCTGGTTTACCACCGGCTAAACTACCTACT GGTTCTGTAAGTTTAGATAGCTCACCTTGCAAAGCAAACGGCACCTTTAGTTCTGCCAAGGAGTTGAGCTTGCAGAAGAATGTTTCTGATACTTGTTCTC CCCCATGCACCAGTTTGTCCGATATGTCTCATGGTAAAAAAGAGGCGACCCTTTCGAATGTAACTACTAATCTTTGTTCTGAGATATCATCCCCAATAGC TGTGCAGAAAAAGAAATTGGTTAAAAGAGCGATTAAGAAAGTTGTAAAAAATCGTAATTCAACTTTGTCACATTCACCATCAGCGAATACACATCATGGA ACTGTGCAAACAGATAGCCTCACTTCTAAATTACCAAGTTCCCCTGCTTCGGACAAAATAGAAACTTCCATGAAGGAGAAAAGCACCACTGGTGACAAGG TGTCCACAACAGACTCCTTGCACTCTTTACCAAATGAAGGGAATGTGTTCCCTGAATATAGGAAGAAAGGTTTATCTCTGCTGAGTTTTGGGCCACATTC CAGGTCACATGGTTGTAAGACTGGTGAAGATTCTGATATTGGGAAATTAGCCAGGTTTGAAGGCGATGGAAACATTTCAAATTCTCTATCTCGTGTCTCT GCTAGTAATGATTTTGATTGTTTAGTTGCAAATAATTCTGTCCATGAATTAAATGGTAGTACTTCTGAAATCAAGGACGTGGTTTATGATGATAAGCAAT TATGCCAGAATGAAGTGTCTCCATCACTTGTTAACTATTCAAATATAGGATGCCCGCATAATAGTCATCTTGTAGATTTAGGGGATGAAATGAATTGCAG ACTGGTTTGTTCCACTGATAATATAGTTAAAACAGATCTTATAAATACACGTGAGTCTGAAAATGATAGGGTTTATCACTTGAATTCCAATGATCTTACA GGTTCAGAGGTGAATCATACAGATTTACAAGAGAATCCTTCAGGTTCAGTAGAGAATTTCATAGTTTCTGAAAGTGGCAATGATGGCATTGCTGGTAAGG CACTTAGAATCACTCAAAATACAAATTTGGAAAGAAACCAAGATACAGATGTGCCAATTAGTGAAGTGATTGCTATTTCGAGTTCAGTAAACAATGGGAT TCAAGAAGGTCTAAATTGCATACAACATGCTAGTGTACTGAAACAGGGTTCTGCTAACGAATCAGCTAATTCAGAAGATAGTATCACTACTCACTGTTGT GACACTGGAAAACTGGTGTCCCCTAGTGATGCTACCGTATTCCTTGAGAATTGTGACACAGAAGAAACATTGTCAAATTTAAATATTTCTGTTGAATTTG ATACATATAAGATAAAGGAGAGAGAAGTTCAGAGTCATTTAAATATTTTGAGTTCAAAGATAGAGGGCATATCTCCTGACCCAGTAAATCCAGTTAGCTA TGCAAGTTATGTTGATAGAGCCACAAATGTGTTGAAAATGCCAAGTCCTTCACAAGATTTTGATCAATCAGTTAAAAGCTTAGATTTAAACTCGAAATCC AGCGCAGATGAGGTCACTACTCTACATGGGAAAATAGAGGTTTCTGAGACTGAATTTTGTGTTGAAAATAATGGCAATGATGTTGCAAATAAGGTTTCAC GTGCTTCTAAAAGGAAAAAAGTCACTGCTACACACCCAACATTCAGCAACACGGTTGTGGTCACTACATCTTGTGCAGATAATCTCACCAGTTTCAGTGA TAACCAAGCACAGAAGAAAGGAGGAACATTGTCAAGCATGAGTACTCTATCTATTGCTCAGTCAATACCTTATTCAAAGGGTATCGCTAAGTTGCCTGAC AATATTTTGGTTGGATGTTCTTTTGAATCTATAAATGCAGATAGGGGATTATTGAGTTCTGAGCATTCGGAAATACAGCATACAGACATTGCCTCTTATT CACTGTGTGAGAATATGCCCATTCTAAACCTTCAGTTCTCGATGTTGCAAGGTGAGAAAAAGGAAAATATTATTCCAGCTGTGCCTATAAGTAGTACTCA AACTGACACTTCAGTCATTGGAAATAGTAAGAGAAAAAAGACTGGTTTAGAGGTTGTCGAAGAAAGTTACCAATATAGAGACCTTGTTCAAATATCTCCA ATTGCTGATATGGAATCTAATGATCTCAATATGAAAGATGATTTACTACCTCAGCAGAACCTTATGCCCTGTCACACCAATGGTGATGGAATCAATGCCA GTATTTTGGATGTTGAATTGATTGAGGATGTACCTGATGCGCTATCAATTATGTGTTCTAAAGGGATGGCATCTGAAGTGCCTGCTGGGAAGATTTTAAA TTATATCAAATCATCCCAAGATTATTCTAAAGTTAAAGCTCATGGTCTGAGTTCATTTGGTTCAGAATTAAATAGGAGCAAAAATCAGCCAGGTGATGTC ATTCCTAAAACTTTCCAGGGTCATTCTTTTACCTTTTCAAAGACAAAGACATCTGCATCTTCATTCCATATATCAAAACCTCGAACTTGGCTTCGTACAA TAAATACTTCTCATACTTATCTACCTGGAATTAAGCCTTTGGTAGCAACGGTTCCTCCCAAAAGGTCAATTTTAGAAAGGAAAGGGAATACTCAAAATAC CTCTTACATTCGCAAAGGTAATAGTCTCATTAGGAAACCTTCTCTGGTTTCTGCTTCATCTCAAATCTCCTCTGCTAAGCAGTCACCTTCTTTTGGCTTA AATGAATTACCAAAAAACACCAGATCTGAAAGCCAGGTTGATTTGACAGAACCAATCTTGAAAGCAGGAATAACAATTGTTCCTCAGCAGAGGCAGAGAA CACCTCCAGCACCTATTGACACCAATTCAGACGAAAATATGTCTGCCCCATTGGTAGAACCTCCTGAAGATCAAACTGATCCATCAAATAATGGGGAGAG CGAAGTTGAAGCCAATGGTAGAAATATTTCTTCTTTGAAACCAAAGAGAATAGTATATATAAAGCCCAAAACAAATCAATTGGTTGCAACTTCGAATTAT TGTGATGTTTCTGTCTCTACTGATAACAAGACTGGGACTGCCTTCTCTGATGGCTACTACAAGAGGAACAAAAATCAATTAGTTAGGACTACATTTGAAA GTCATATCAACCAGACAGTTGCGATGCCCAATAGCACTGTAAGCTCTGATGGACAAGGGGTTCGTAAGGTTCTTAGCAACAAGAGGTTTAGTAAGAGGCG ATCACATAAGGTTGCTGGGACCTCATGCAAACCTTTAAGAGCCTCATTGGTGTGGACACTTAAAGGAAAAAATTCTTCCAAAAATGTTTGTGACTCATGG TATTATCAAAAGATTTTACCTCATTTGTTTCCATGGAAAAGAACACCATATTTAAGAGGTTTTGTTAATAATTATGCTTCAAGTTCCAATCATAGTTCCT TATCTGCAATCAGGTACTTGAGCATTTGTTACTGCTTATTTATGTGTTTTTCACTTTCATTTGGCTGTGCACTTCAGCAATAATCAATTACTGTTGGTCT TTCAGCAAGAAATTGTTTGTTTTAAGAAAGAGGGACACTGTTTACACTAGGTCGACCCATGGGTTTTCTCTTTGGAAATCCAAGGTATTAGGTGTTGGTA GGTCTAGTTTAAAATGGTCAAAATCCACAGAGAAGCATTCAAAGCTGTCAAATGAGGTTAGTTTAGATTTTCATACCATGGCTTTGTTCATTGAAGTATC CTTTTTAGTTAGGCATGTTTTATCTAAAGTGAATAAGATCTTTCCTAACTATTATTCATTCAATTTCTCATGATCATTTCAGGAAGCCACCCTCACAGTT GCTGCAGTAGAGAGGAAAAAGAGAGGACAGGAAAGTGCGGCTTGCATTGGTTCTCGGACAAAGAGTAGGAAGAATTCTTTCCACGAGTGTTTGTGATAAT TATAATGTTGTAGACTCTGTTTTTGTGCTATTAAAATTGTTTACGCTGCATGTGTTCATTATCTTTGTTATTTACTCTGACTTTGAAAGAAGCGGCTGAT TGTGTAGGAGAACGTATATTTCGTATTGGTTCAGTTCGTTACAGAATGGATCCTTCCAGGCGGACACTTAAGAGGATTTCAGGTTTATTTTTTTATTAAA TCCTCTGTTACTTGGGTCTTGCATCACAATCTACATTTCAGAGTATGTTTTATTTGTCAAACGGATACATGCTTTTGGGACATTGGACACATTTCCCCAT ACTTAAGATATTTTATACAGTGGACACATTTTCACATATTTTAGATGAAAATTTTGCAACTTATATATGTACTGAAAATTGATATCACAGATCAAATATC AACTTGTTGATTGTTAAACCCTGGAGTGGTTGACAATGTCCTTTGGGGATGATGCCATCTCTGATTGATTATGATCAAGTTTGTTGGGTGTATGTGTTTT TGCCAATTCGATATGTTTTCACATGCTTAGATATTTACCATTGATGAAGTTTGGTATTAGAGTCATGTTTTCAGGTTAGATTGCAAATCTGTAATTTATA TGTATGCAACTTTGCATATCATGTATCTTTCTGAAAATTAATTGTGTAACCTTTGAATGAATTTTGGATATGATGACATCTTCTCCTGTTATCTATAAGG ACAAATTTGTAAGGTGTTATAGTTTCTGAGCCTTTTGTTTTATTTGTTTAAAGAATAATATTATTAGATGAGAGGAATAAATGTATAAACTATAAAGATA CAAAGGATAAGAAGCCCTTCTAAGAAAACACATTAAGTCGTCAACTAAGCAATGCTTGTTAGTTAACTACTTTGCTTGTCAAACTAAAAATAAGAAAGAG TCCTTCCAATGAAACACAGCAAGTTATCAACAAAGCAGTGCTTGTTAGTCGTTAGGTACTTTGCTTGTCAGTCGTTCGCTAGTTTGCTTCAGTCATTAGC TACTTTGCTAGTCAAACAAAGAATCTCTTTGAAATAGTCATTAGATGAGCATTATGAAGATGTTAAGAGAAACTATTCCCATAGAGAGGCTGCAGCAGTA TTTGTCATTCCTTCTATTCTTAAGCATCAAATTACCGCATACATTGCACACCTCTAAAGTGTTCTTCCCTTTCACTCCAAAGGTTCCTGAATTGTTAGTT AAGTATTTGCTTCCAGATATGATGTGAAGAACAATGAACTCAACAATTGTGAATTTTTCAGATTAAATTTAAGTACATGTGATGCAAAGATGCTGGAAGA AAATGCAAATGTATAATTTTTGCAACCTCCAATTTTTCTTATTGTTGATTTCATATACAATAGTGCCATCAATTAGTCTTTGTTTATAGTTTTGAACGTT TGATTGCCTGTTTAGACAAGGTTGGGGTCTGACGGTATACTCAGAAATCATTAAGCTCCTTTCTTTTGTCGCCATGCCATGAATACTTCATAATTATGCC CTTTGTTCTTTCATTTCATTTTCACTTCTCATTTTGCTGTTATTATATGGTCTGAAATATTTTGCTATCTTTCTCCTAGCAAGTTAACAAGTTCTATCAC TACGGCGGTCTTACGAAATCTTGCTTAATGTTCTTTGTAGATGATGAACCCATGTCCTCTGCTTCTGTCCCTTCAGGTTTGACTGCCAAAAGAGCTTACA TTCCAAGGAGATTAGTGATTGGAAATGATGAGTATGCACATTGTTCTTTTTCACTGGCTTTTATATCCTATACGATGAATTTCCAATTTTGTCAGCCTTG GTTGTCTTGTTTAACAAGCCTATGAAGAAAGTAATTGAAGAAGAGAGAGAAGATTTGTTATCATGTCTTGTAATATTATTCACCCTATAGTTAAGCATTT ACATGATGGCATCAACATTTGCAGATATATCCGAATTGGCAATGGTAACCAGCTTATTAGAGACCCAAAGAAGAGAACTCGGAAATTGGCAAATGAAAAA GTTAGāBLAST |
Tissue | pods |
Gene name | LI_gene_191046; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_304617
Blastp | Uncharacterized protein At1g21580 from Arabidopsis with 35.92% of identity |
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Blastx | Uncharacterized protein At1g21580 from Arabidopsis with 35.92% of identity |
Eggnog | zinc finger(COG5084) |
Kegg | Link to kegg annotations (AT1G21580) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461466.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |