| Id Trinity | TRINITY_DN52226_c8_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_304780 |
| Sequence | TTTGTGGACCATTCCTGAAATTGCTCTTGCAACTTCAAACCATGGAAGCGTTACAAGGCACTACAACTTTGATGTACACAGTATCTTCCGTTTAGCTTAT ATTGACCTAAAGCAAAAGTTGTAGAACTTGGTGCAAAAAATAAACGAAGTATTGCATATTTATCATTTTTTTGTGCAGATAAGGCTGAAAAATGTTACGA GGCTGTGCCAAACAAAGAGCATACTTACCGTGAATGGGAAGTTCCCGGGGCCTCGAGTTGTTGCTAGAGAAGGAGACAGATTAATTGTTAGGGTGGTTAA TCATGTTCCAAACAATATAAGCATCCACTGGCATGGAGTGAGACAACTTCAAAGTGGATGGTCTGATGGGCCATCTTACATAACTCAATGCCCCATTCAA ACCAACCAAAGCTATGTGTACAACTTCACCATTGTTGGGCAAAGAGGAACTCTGTTTTGGCATGCACACTTCTCATGGTTAAGAGCCACTTTGTATGGAC CCTTAATCCTCCTCCCTAGGCATAATGAATCTTATCCATTTCTCAAACCTTACAAGGAAGTCCCCATCCTTTTTGGTGAATGGTGGAAGGTGGATCCAGA GGCTGTTATTGCAGAAGCCCTTCAGACAGGGGGTGGCCCAAATGTCTCTGATGCCTACACCATTAATGGACTTCCTGGGCCCCTCTACAATTGCTCCAAT AACGAGACATTCAGGTTAAAGGTGAAACCAGGGAAGACATATCTTCTTCGTTTGATCAATGCTGCACTCAATGATGAACTTTTTTTCAGCATAGCAAACC ACACCTTAGTCACTGTTGAAGCTGATGCTACATATGTTAAACCTTTCAAATCCAACGTTATTCTCATTACACCAGGACAAACCACAAATGTTTTGTTAAA GACAAAACCTCATTACCCAAACACCACTTTCTTCATGCTAGCAAGCCCATATTTCACAGGTTTGGGTACCTTTGACAATTCCACAGTGGCTGGAATTGTA GAGTATGTTAACCCATTTGGTAGTATCAATGTTCCTAATTCTTCAACCAATTTGAAACCTACACTTCCAGCAATCAATGACACATCATTTGTTGCAAACT TCAGTAGCAAACTTCGCAGTTTGAACAATGCAAAGTACCCTGCTAACGTGCCTCAAACTATTGACAAGAGTTTCTTCTTCACGGTAGGAATTGGATCAAG TCCATGCCCAAAAAACCAAACATGCCAAGGACCAAATAATAGTTCAAAGTTTGCAGCTTCAATGAACAATATATCTTTTGCTCTACCTTCAGTAGCACTT CTCCAACAACATTATTTGTTTAGGGAGAAATATAAAAGTGTTTATACTACAGACTTTCCAATTGTACCTCTTGATCCATTCAACTATACAGGGACTCCAC CAAATAACACTAGGGTCAGTAATGGAACAAAGACTGTGGTGATACCTTATAATACAAGTGTGCAGGTTGTGTTGCAGGACACTAGCATTTTGGGAGCTGA GAGCCATCCTTTCCACCTTCATGGATTCAATTTCTATGTTGTGGGTCAAGGCTTTGGGAACTTTAATTCTAGTGCAGACCCTGCAAAGTTCAATCTTGTT GACCCTGTTGAGAGGAACACTGTTGGTGTGCCCTCTGGTGGTTGGCTTGCAATTCGATTCCTTGCTGACAACCCAGGTGATACTCACTATTGTTAATCTT CTAATATTCCTCATGAGAAGTTCTTGCTGGATTCAAATTTATTATGCCAATTAGCCAATCATAATATTGAATAGTTTGTACAAGAATATTTAGGATTTGA ATTCTCAAAGTGGATGGAATAGCAGTGAAGTGAGAAAATCAGGGTGTATAGCCCTTATACCATTTAGTAGATTATGATGTACTTCATTAAATAACAATCT CATTTGATTAATTTGAAGAGCATAACATAAATAAGGTTAATTACATTATATATGTGAGTATTAAGACTTGTAAAGTTTGGTTTATGTTTGTAAAAAGTGC ACCCTATTTGACAAGTGATATACATGTATATGGGTGAAACAGGTGTTTGGATGATGCATTGCCACTTTGATGTGCACCTTAGTTGGGGGTTAAGGATGGC TTGGATTGTTGAAGATGGGAAGCTCCCTAATCAGAAGTTGCCTCCTCCACCACCTGATCTCCCTAAATGTTGAATACAATGACCCTTTTTCGTATGCATG GACCACCTGCTGCATGTTCTTGCCAATTTTCCTTCCTCAACAAACTCTCTTTTCATCTTCTGCTTTTTCCAATTCTTAGTTAATTTAGGATTTTTTTGCC ATGTTTTACCTTCTATATATGAGTGAAGAATAACCATCATGCAGTGGCAATATTCAATCTATATTTCTTAGTAAACTTTCAAGTACAAAAAAAGTTGGGG GAGGTGGGGTTCTTTTTTAAAATAAACAACAACTTTGAGCCTCATTGAACAATACTTGTATCATCGAACATAACATTCAAAGGACACATTCTTGAATATT AAGTATCTATATTAACATTAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_191067; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_304780
| Blastp | Laccase-4 from Oryza sativa with 65.87% of identity |
|---|---|
| Blastx | Laccase-2 from Arabidopsis with 68.9% of identity |
| Eggnog | Multicopper oxidase(COG2132) |
| Kegg | Link to kegg annotations (4327500) |
| CantataDB | Link to cantataDB annotations (CNT0001549) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019465204.1) |
| Pfam | Multicopper oxidase (PF07731.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |