Ll_transcript_304784

• Id Trinity: TRINITY_DN52226_c9_g2_i2
• Name Transcript: Ll_transcript_304784
• Sequence: ACTCATGTTAGTTTTGAGGCTTTGTCACTTTCTTTATAAGGCCAAGCAGAACAGATAAACCATTAGAGTGTTCAACTTTGAATTATCTTTTCTTGAAAAC TTTTATTGCTTTCCCTCTTGATTTTGTGAATAAAAGGGAATCTTTCACTTTCTGCATGATTTGATTTGATGAACTCTGTGTAGTTTAATTGCTCTTATTT CATGAATCATTACATGGTATGTTATTCCATTTTCCTCTACCTTTTCTGATTCTTCAATATGTAATTTACTGTATGGATTATGAGAATGCATTCATCATAA AAATATCAGCATTCATCTTTTTTTTGTTAATTTCTTCAGAATTGGTAAGAAATGTTATTGTTTTTTTGGTAGGTGCTACCCTTTAGTCTGTAGGAAGTGG AAAATCAAATGGAGAAACTGAACTTATCTGCTAATTATGATCTTGATGCCAGTATCGACCGGTCGGGTTCATTTCGTGTATTTGAACCGACGGAGAGTCG AGATGTTGGACAGGCAAGTAGTAGAAGGGAGCAGAATGATACAGAAGATGTGAGACTTGATGGACAATTGATAAGTGATTCCTCTAATTCTGCAAGTAGG AGAGGGGAATCTGTGAACAAGTGGATGGCATTTGCTACGGAGCCCGGAATCGATGACGGAAACTCTTCAATGAAGTTTGTTTCTGGGGATAACAACTTGA AGACTAATCAAAATGGGAAGTCAACTTCCGGTCATCATCAAATTTTAACTGAAGCAAGCATAGATGAGAGAATTGATGAATGGGGTCTTGTGGTGAACTC GGAGAGTTTTAAGACAACAGCTTCCTCTTTTGATGGTGATAGGATCAAAAAATTATCCAATAGATTTGTTGAATCGGCAAGGACGTCCGGGGAATCGAAT TATGAGTCCGAGTCATCATCAGGGGTGATCCCAAGGGTCTCGCGGGAGTTGAAGGAAGCATTGGCGACGCTACAACAGACATTTGTTGTCTCAGATGCAA CGAAGCCAGACTGTCCAATCATGTATGCCAGCAGTGGCTTTTTTAGTATGACCGGTTATTCTTCGAAGGAGATTATCGGAAGGAACTGCCGATTTCTTCA GGGGGCTGATACAGATAAGAATGAAGTGGCGAAAATTCGGGATGCAACTAGAAATGGGAAAAGTTATTGTGGCAGGCTTTTAAATTACAAGAAAGATGGA ACTCCGTTCTGGAATCTTCTAACTATCACTCCCATCAAAGATGATAATGGCAATACAATCAAATTCATAGGAATGCAGGTTGAGGTGAGCAAGTACACAG AAGGTCTGAATGAAAAGGCGTTACGACCAAATGGATTGCCGAAGTCGTTAATTCGTTACGATGCTCGTCAGAAGGAGACAGCACTGTGTTCCATGACCGA GGTGGTCCAAACTGTTAAGGATCCAAAATCCGTTGTTCGGGCTAGGAATGATGATACTGCCAACAGCCTTGTAGAGCAAGACAAGGTCGATGATGATTTT GTTTTGCCGAAGTCTGTTGAAACCAGGAATACAAGTACACCTGGTAGAAAACCTTCTTCAACTAACATCCAAAGTGATGCATCACGCCTGAGTTCTACTC AGGATAGGAAGAGCAAGTTATCAAGAAAATCAGGACGGAGTTCCTCCACGAGTTTCAAAGGGAAATCTCTGAGTTCTGCCAGGGGAGAGGAAGAGACACC CATTGTCGAACTAGAGGTTTTGATGACGAAGGAAATAGAGCGGCCTGACAGCTGGGAGCGCTCGCAAAGAGAAAGAGATATAAGGCAGGGAATTGATTTA GCAACGACATTGGAGCGTATAGAAAAGAATTTTGTGATTTCTGATCCTAGACTTCCCGATAACCCGATTATATTTGCATCCGATAGCTTTCTTGAACTTA CAGAATATACACGAGAAGAAATTTTGGGACGAAATTGTCGGTTTCTTCAAGGACCGGAAACAGATATGTCGACCGTTGATAAGATTAGAGATGCTATCAA AGAGCAGAAGGAGATTACTGTTCAGTTGATCAACTATACCAAGAGTGGAAAGAAGTTCTGGAATTTGTTTCACTTGCAACCTATGCGTGACCAAAAGGGT GAACTTCAATACTTCATTGGTGTTCAATTAGATGGAAGCGATCATGTAGAACCCTTACAAAACCGCTTGTCCGAAAGAGCTGAGCTACAAAGTACTAAGT TGGTTAAAGCCACTGCAGAAAACGTTGATGGAGCTGTCCGAGAACTTCCTGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATTCATTCTCAACCAGT ATTTCCACTACCTCACAAAAGGGACAATCCTTCTTGGGTAGCAATACAAAAGATAGCTGCAAGAGACGGAAAGATTGGATTGCACAATTTTGCGCCGATA AGGC
• Tissue: pods
• Gene name: LI_gene_191071;
• Additional information: details;

Expression of Ll_transcript_304784

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.1
• PS2: 0
• PS3: 0.2
• PW1: 0.2
• PW2: 1.4
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_304784

• Blastp: Phototropin-2 from Arabidopsis with 65.91% of identity
• Blastx: Phototropin-2 from Arabidopsis with 65.67% of identity
• Eggnog: Histidine kinase(COG2202)
• Kegg: Link to kegg annotations (AT5G58140)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424315.1)
• Pfam: PAS domain (PF13426.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;