Ll_transcript_304787

• Id Trinity: TRINITY_DN52226_c9_g6_i1
• Name Transcript: Ll_transcript_304787
• Sequence: AATCAATCTAGTTTATTATATTTTATTGTATTTTGTGTGAACCTTGGAACATTATCTCTTGAACACAAGATTTTTGTTAGTTTTCAGTCTTTGCCACATT CTTTATAAGGCCACAGAAATTACAGATAAACTATGATACTTCACATTTTCAATTATCTCTTCTAAAAAAATCTGACTTTTAGAGTTTACTTTCACTTCAA GAAACACTCTTTTATTGCTTTTCCTTTTGATATTGTGAAAAAATGATTCTTTCACTTTATGCAGGATTTGATGAATTTTGGCTAGTCTGGTTGCTCTTTT TATGAATCATTACATGGTATGTGTCGGGAAGTGTTATCTGTAGGCAGTAGAAAACTCGAATGGAGAATCTGAAAATACCTGCTAATTCTGATCCTGATGC CAGCAGCGACCCGTCAGATTCATTTCGTGTATTTGAACCACCGACGAGTCAAGCTGTTGGACAGCCGAGTAGTAGAAGAGAGCAAAATGTTACAGAAGCT GTAAGACTCGATGGACGTTCGGTAAATGCTTCGTCTAATTCTGCAGGCAGCAGGGGGGAATCTGTCAGCAAGTGGATGGCATTCGCTACGGAGTCCGAAT TCGATGATAGCAACTCTAAATTGTTTATTTCCGGGGATAAAAATATAATGAAAGACAAAAACTTGAGGACTAATCAGAATGGGAATTCATCTTCTGATCA TAAACAAGTTTTAACTGAAGCAAGCATAGCCGAGAGAACTGCCGAGTGGGGTCTTGTCGCAAACTTGGATAGTTTTAAGACCTCTTTCGATGGTGACAGG ATCAAAAAGCTATCCGATAGATTCGTTGAATCAACTAGGACATCCGGGGAATCGAGTTATGGGTCCGAGTCATCATCAGGGTTGATCCCGAGGGTCTCAC AAGAGTTGAAAGAAGCATTGGAGACACTACAACAGACATTTGTTGTCTCGGATGCAACAAAGCCAGATTGTCCAATCATGTATGCCAGCACCGGCTTTTT TAGCATGACCGGTTACTCTTCAAAGGAGATTATTGGAAGGAACTGCCGATTTCTTCAGGGGCCTGATACCGACAAGAATGAAGTGGCGAAAATTCGGGAT GCAACTAGAAATGGGAAAACATATTGTGGCAGGCTTTTAAACTACAAGAAAAATGGAACTCCCTTCTGGAATCTTCTCACTGTCACCCCCATCAAAGATG ACAATGGCAATACAATCAAATTCATTGGAATGCAGGTTGAAGTGAGCAAGTACACAGAAGGTTTGAATGAAAATGCGTTACGACCAAATGGATTGCCGAA GTCATTAATTCGTTACGATGCTCGTCAAAAGGAGACAGCTCTGTGTTCCATGACCGAGGTAGTCCAAACTGTTAAGGATCCAAAATCCATTATCCGGGCT AGGACTGATGATACTGCTACCAAGAACGACGAGCAAGAGAAGCCTAATTTTGATCTTGTTTCGCCGAAGTCTGTTGAAACCGGGCATACAAGTTTACCAG GTAGACAACCTTCTCCACTTAACATCCAAAGTGATATATCTCGTGCGAGTTCTACTCAGGATAGGAAGAGCAAGTCATCAAGAATATCAGGCCGAACTCC TTCGCTGAGTTTCAAAGGGAAATCTATGAGTTCTGTTAGGGGAGAGGAGGAAAAGCCAATTGTCGAACCGGAGGTTTTGATGACTAAGGAAATAGAGCGG TCCGACAGTTGGGAGCGTTCTCAAAGAGAAAGGGATATAAGGCAGGGAATCGATTTAGCAACCACGTTGGAGCGCATAGAGAAGAATTTTGTGATTTCTG ATCCTAGACTTCCGGATAACCCAATTATATTTGCATCTGATAGCTTTCTTGAACTCACAGAGTATACGCGAGAAGAAATTTTGGGCCGAAACTGTCGGTT TCTTCAAGGACCGGAAACCGATATGTCGACTGTGGATAAGATTAGAGATGCTATCAAAGAGCAAAGGGAGATCACTGTTCAGTTGATCAACTATACTAAG AGTGGAAAGAAGTTTTGGAATATGTTTCACTTGCAACCTATGCGTGACCAAAAGGGTGAACTTCAATACTTCATTGGTGTTCAATTAGACGGAAGTGATC ACGTAGAACCCTTACAAAATCGTCTGTCCGAGAGAGCCGAGCTACAAAGTTCTAAGTTGGTTAAAGCCACTGCAGTAAATGTTGATGAAGCTGTTAGAGA ACTTCCTGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATTCATTCCAAACCTGTATTCCCACTACCTCACAAAAGGGACAATCCTTCTTGGGTAGCA ATACAAAAGATAGCTGCAAGAGACAAAAAGATTGAGTTGCATAATTTTGTGCCCATAAGGCCATTGGGTTGTGGAGATACTGGAAGTGTTCATCTGGTGG AACTCCAAGGTACTGGTGAACTATATGCAATGAAGGCAATGGAAAAATCTGTAATGCTAAATCGTAATAAGGTTCACCGTGCATGCATTGAGAGAGG
• Tissue: pods
• Gene name: LI_gene_191075;
• Additional information: details;

Expression of Ll_transcript_304787

FPKM

• PAB: 0.9
• PNAB: 1.9
• PS1: 0.4
• PS2: 0.2
• PS3: 0.7
• PW1: 1.1
• PW2: 2.8
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_304787

• Blastp: Phototropin-2 from Arabidopsis with 69.04% of identity
• Blastx: Phototropin-2 from Arabidopsis with 68.88% of identity
• Eggnog: Histidine kinase(COG2202)
• Kegg: Link to kegg annotations (AT5G58140)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446967.1)
• Pfam: PAS fold (PF00989.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;