Ll_transcript_304790

• Id Trinity: TRINITY_DN52226_c9_g6_i2
• Name Transcript: Ll_transcript_304790
• Sequence: AATCAATCTAGTTTATTATATTTTATTGTATTTTGTGTGAACCTTGGAACATTATCTCTTGAACACAAGATTTTTGTTAGTTTTCAGTCTTTGCCACATT CTTTATAAGGCCACAGAAATTACAGATAAACTATGATACTTCACATTTTCAATTATCTCTTCTAAAAAAATCTGACTTTTAGAGTTTACTTTCACTTCAA GAAACACTCTTTTATTGCTTTTCCTTTTGATATTGTGAAAAAATGATTCTTTCACTTTATGCAGGATTTGATGAATTTTGGCTAGTCTGGTTGCTCTTTT TATGAATCATTACATGGTGTTATCTGTAGGCAGTAGAAAACTCGAATGGAGAATCTGAAAATACCTGCTAATTCTGATCCTGATGCCAGCAGCGACCCGT CAGATTCATTTCGTGTATTTGAACCACCGACGAGTCAAGCTGTTGGACAGCCGAGTAGTAGAAGAGAGCAAAATGTTACAGAAGCTGTAAGACTCGATGG ACGTTCGGTAAATGCTTCGTCTAATTCTGCAGGCAGCAGGGGGGAATCTGTCAGCAAGTGGATGGCATTCGCTACGGAGTCCGAATTCGATGATAGCAAC TCTAAATTGTTTATTTCCGGGGATAAAAATATAATGAAAGACAAAAACTTGAGGACTAATCAGAATGGGAATTCATCTTCTGATCATAAACAAGTTTTAA CTGAAGCAAGCATAGCCGAGAGAACTGCCGAGTGGGGTCTTGTCGCAAACTTGGATAGTTTTAAGACCTCTTTCGATGGTGACAGGATCAAAAAGCTATC CGATAGATTCGTTGAATCAACTAGGACATCCGGGGAATCGAGTTATGGGTCCGAGTCATCATCAGGGTTGATCCCGAGGGTCTCACAAGAGTTGAAAGAA GCATTGGAGACACTACAACAGACATTTGTTGTCTCGGATGCAACAAAGCCAGATTGTCCAATCATGTATGCCAGCACCGGCTTTTTTAGCATGACCGGTT ACTCTTCAAAGGAGATTATTGGAAGGAACTGCCGATTTCTTCAGGGGCCTGATACCGACAAGAATGAAGTGGCGAAAATTCGGGATGCAACTAGAAATGG GAAAACATATTGTGGCAGGCTTTTAAACTACAAGAAAAATGGAACTCCCTTCTGGAATCTTCTCACTGTCACCCCCATCAAAGATGACAATGGCAATACA ATCAAATTCATTGGAATGCAGGTTGAAGTGAGCAAGTACACAGAAGGTTTGAATGAAAATGCGTTACGACCAAATGGATTGCCGAAGTCATTAATTCGTT ACGATGCTCGTCAAAAGGAGACAGCTCTGTGTTCCATGACCGAGGTAGTCCAAACTGTTAAGGATCCAAAATCCATTATCCGGGCTAGGACTGATGATAC TGCTACCAAGAACGACGAGCAAGAGAAGCCTAATTTTGATCTTGTTTCGCCGAAGTCTGTTGAAACCGGGCATACAAGTTTACCAGGTAGACAACCTTCT CCACTTAACATCCAAAGTGATATATCTCGTGCGAGTTCTACTCAGGATAGGAAGAGCAAGTCATCAAGAATATCAGGCCGAACTCCTTCGCTGAGTTTCA AAGGGAAATCTATGAGTTCTGTTAGGGGAGAGGAGGAAAAGCCAATTGTCGAACCGGAGGTTTTGATGACTAAGGAAATAGAGCGGTCCGACAGTTGGGA GCGTTCTCAAAGAGAAAGGGATATAAGGCAGGGAATCGATTTAGCAACCACGTTGGAGCGCATAGAGAAGAATTTTGTGATTTCTGATCCTAGACTTCCG GATAACCCAATTATATTTGCATCTGATAGCTTTCTTGAACTCACAGAGTATACGCGAGAAGAAATTTTGGGCCGAAACTGTCGGTTTCTTCAAGGACCGG AAACCGATATGTCGACTGTGGATAAGATTAGAGATGCTATCAAAGAGCAAAGGGAGATCACTGTTCAGTTGATCAACTATACTAAGAGTGGAAAGAAGTT TTGGAATATGTTTCACTTGCAACCTATGCGTGACCAAAAGGGTGAACTTCAATACTTCATTGGTGTTCAATTAGACGGAAGTGATCACGTAGAACCCTTA CAAAATCGTCTGTCCGAGAGAGCCGAGCTACAAAGTTCTAAGTTGGTTAAAGCCACTGCAGTAAATGTTGATGAAGCTGTTAGAGAACTTCCTGATGCCA ACTTGAGACCAGAAGATTTGTGGGCAATTCATTCCAAACCTGTATTCCCACTACCTCACAAAAGGGACAATCCTTCTTGGGTAGCAATACAAAAGATAGC TGCAAGAGACAAAAAGATTGAGTTGCATAATTTTGTGCCCATAAGGCCATTGGGTTGTGGAGATACTGGAAGTGTTCATCTGGTGGAACTCCAAGGTACT GGTGAACTATATGCAATGAAGGCAATGGAAAAATCTGTAATGCTAAATCGTAATAAGGTTCACCGTGCATGCATTGAGAGAGG
• Tissue: pods
• Gene name: LI_gene_191075;
• Additional information: details;

Expression of Ll_transcript_304790

FPKM

• PAB: 5.3
• PNAB: 8.3
• PS1: 3.2
• PS2: 4.3
• PS3: 6.1
• PW1: 6.8
• PW2: 15.3
• PW3: 15.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_304790

• Blastp: Phototropin-2 from Arabidopsis with 69.04% of identity
• Blastx: Phototropin-2 from Arabidopsis with 68.88% of identity
• Eggnog: Histidine kinase(COG2202)
• Kegg: Link to kegg annotations (AT5G58140)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446967.1)
• Pfam: PAS fold (PF00989.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;