Ll_transcript_304791

• Id Trinity: TRINITY_DN52226_c9_g6_i3
• Name Transcript: Ll_transcript_304791
• Sequence: AATCAATCTAGTTTATTATATTTTATTGTATTTTGTGTGAACCTTGGAACATTATCTCTTGAACACAAGATTTTTGATTTGATGAATTTTGGCTAGTCTG GTTGCTCTTTTTATGAATCATTACATGGTGTTATCTGTAGGCAGTAGAAAACTCGAATGGAGAATCTGAAAATACCTGCTAATTCTGATCCTGATGCCAG CAGCGACCCGTCAGATTCATTTCGTGTATTTGAACCACCGACGAGTCAAGCTGTTGGACAGCCGAGTAGTAGAAGAGAGCAAAATGTTACAGAAGCTGTA AGACTCGATGGACGTTCGGTAAATGCTTCGTCTAATTCTGCAGGCAGCAGGGGGGAATCTGTCAGCAAGTGGATGGCATTCGCTACGGAGTCCGAATTCG ATGATAGCAACTCTAAATTGTTTATTTCCGGGGATAAAAATATAATGAAAGACAAAAACTTGAGGACTAATCAGAATGGGAATTCATCTTCTGATCATAA ACAAGTTTTAACTGAAGCAAGCATAGCCGAGAGAACTGCCGAGTGGGGTCTTGTCGCAAACTTGGATAGTTTTAAGACCTCTTTCGATGGTGACAGGATC AAAAAGCTATCCGATAGATTCGTTGAATCAACTAGGACATCCGGGGAATCGAGTTATGGGTCCGAGTCATCATCAGGGTTGATCCCGAGGGTCTCACAAG AGTTGAAAGAAGCATTGGAGACACTACAACAGACATTTGTTGTCTCGGATGCAACAAAGCCAGATTGTCCAATCATGTATGCCAGCACCGGCTTTTTTAG CATGACCGGTTACTCTTCAAAGGAGATTATTGGAAGGAACTGCCGATTTCTTCAGGGGCCTGATACCGACAAGAATGAAGTGGCGAAAATTCGGGATGCA ACTAGAAATGGGAAAACATATTGTGGCAGGCTTTTAAACTACAAGAAAAATGGAACTCCCTTCTGGAATCTTCTCACTGTCACCCCCATCAAAGATGACA ATGGCAATACAATCAAATTCATTGGAATGCAGGTTGAAGTGAGCAAGTACACAGAAGGTTTGAATGAAAATGCGTTACGACCAAATGGATTGCCGAAGTC ATTAATTCGTTACGATGCTCGTCAAAAGGAGACAGCTCTGTGTTCCATGACCGAGGTAGTCCAAACTGTTAAGGATCCAAAATCCATTATCCGGGCTAGG ACTGATGATACTGCTACCAAGAACGACGAGCAAGAGAAGCCTAATTTTGATCTTGTTTCGCCGAAGTCTGTTGAAACCGGGCATACAAGTTTACCAGGTA GACAACCTTCTCCACTTAACATCCAAAGTGATATATCTCGTGCGAGTTCTACTCAGGATAGGAAGAGCAAGTCATCAAGAATATCAGGCCGAACTCCTTC GCTGAGTTTCAAAGGGAAATCTATGAGTTCTGTTAGGGGAGAGGAGGAAAAGCCAATTGTCGAACCGGAGGTTTTGATGACTAAGGAAATAGAGCGGTCC GACAGTTGGGAGCGTTCTCAAAGAGAAAGGGATATAAGGCAGGGAATCGATTTAGCAACCACGTTGGAGCGCATAGAGAAGAATTTTGTGATTTCTGATC CTAGACTTCCGGATAACCCAATTATATTTGCATCTGATAGCTTTCTTGAACTCACAGAGTATACGCGAGAAGAAATTTTGGGCCGAAACTGTCGGTTTCT TCAAGGACCGGAAACCGATATGTCGACTGTGGATAAGATTAGAGATGCTATCAAAGAGCAAAGGGAGATCACTGTTCAGTTGATCAACTATACTAAGAGT GGAAAGAAGTTTTGGAATATGTTTCACTTGCAACCTATGCGTGACCAAAAGGGTGAACTTCAATACTTCATTGGTGTTCAATTAGACGGAAGTGATCACG TAGAACCCTTACAAAATCGTCTGTCCGAGAGAGCCGAGCTACAAAGTTCTAAGTTGGTTAAAGCCACTGCAGTAAATGTTGATGAAGCTGTTAGAGAACT TCCTGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATTCATTCCAAACCTGTATTCCCACTACCTCACAAAAGGGACAATCCTTCTTGGGTAGCAATA CAAAAGATAGCTGCAAGAGACAAAAAGATTGAGTTGCATAATTTTGTGCCCATAAGGCCATTGGGTTGTGGAGATACTGGAAGTGTTCATCTGGTGGAAC TCCAAGGTACTGGTGAACTATATGCAATGAAGGCAATGGAAAAATCTGTAATGCTAAATCGTAATAAGGTTCACCGTGCATGCATTGAGAGAGG
• Tissue: pods
• Gene name: LI_gene_191075;
• Additional information: details;

Expression of Ll_transcript_304791

FPKM

• PAB: 0.8
• PNAB: 4.5
• PS1: 2.4
• PS2: 2.9
• PS3: 5
• PW1: 8.6
• PW2: 6.2
• PW3: 9.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_304791

• Blastp: Phototropin-2 from Arabidopsis with 69.04% of identity
• Blastx: Phototropin-2 from Arabidopsis with 68.88% of identity
• Eggnog: Histidine kinase(COG2202)
• Kegg: Link to kegg annotations (AT5G58140)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446967.1)
• Pfam: PAS fold (PF00989.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;