| Id Trinity | TRINITY_DN52227_c3_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_304681 |
| Sequence | CTTTCTCCCAAATACGTCCCACACATCGCACATGTGATTTGCACTGGATCTATGTCCCTCCTTTTCTGCGTCAAGATCTACGACCACTGCACTTCAATTC TTCACCACCTTCTCTGTATTCAAACCTCACAATACTCTTCTCACTAACCATTCACCCTTCTGAGATTCATCTCTTCTCAAGAGAGAGCTTCCGAGATGGC TTTCATGGCGGTCTTGGAATCCGATCTTCGCGCTCTCTCTGCTGAAGCTCGACGTCGCTATCCTGCTGTTAAAGACGGTGCCGAACACGCAATTCTCAAG CTTCGTACATTGTCTAGTCCTAGTGAAATTGCGCACAATGAGGACATACTACGAATCTTTTTGATGGCGTGTGAGGTCCGAACAGTCAAGCTTAGCATTA TTGGACTTTCGTGTTTGCAAAAATTAATATCTCATGATGCTGTTTCTCCATCTGCTCTGAGAGAGATTCTAATGACACTGAAAGACCATGCAGAAATGGT GGATGAGGGTGTTCAGCTCAAGACCCTTCAAACAATATCAATAATATTCCAGTCGCGTTTACACCCTGAAAACGAGGATACCATGTCTCAAGCTCTTGGC ATCTGTCTCAGGCTTCTTGAAAACACCCGATCTTATGATAGTGTGCGGAATACTGCTGGAGCTACCTTCAGGCAAGCAGTGGCCTTGATTTTTGACCGTG TAGTTTTGGCTGAGTCTCTTCCTCCCGGAAAGTATTATTTTGGAGGCCAGCTTTCTCGGTCAAGTACAGTTACTGGTGATGTTAACCATAGCATCAATTT GTCTGACTCACTTGGTAATGAATTTGTTTCTGGAGTGTCTTCATTTACGAGGGAGACTTTAACTGAAACTGGAAAACTTGGGTTGCGCTTGCTTGAAGAC CTGACATCTCTTGCCGCAGGTGGATCTGCGATTTGGTTACACGCTAATATTAATCAGAGGGCATTTGCACTTGATATTCTTGAGTTCATCTTGTCCAATT ATGTGGGTGTTTTCCGAACCTTGTTACCATATGAACAGGTCTTACGACGGCAGATATGTTCACTTCTGATGACTTCACTTCGCACCAATGCTGAGCTTGA AGGAGAAGCTGGTGAGCCTAGCTTTCGCCGTTTGGTCTTGCGCTCAGTTGCTCATATTATAAGGCTTTACAGTTCTTCCCTTGTCACTGAATGCGAGGTT TTTCTCAGTATGTTATTGAAGGTTACCTTTCTTGACTTGCCACTATGGCATCGCATTCTTGTTCTTGAGATTTTGAGGGGATTTTGCATCGAGGCACGCA CGTTGCGTATACTTTTTCAAAATTTTGATATGCACCCTAAGAATACAAATGTTGTGGAGGGAATGGTCAAAGCTCTGGCAAGAGTTGTTTCAAATGTACA GGTTCAAGAATCAAGTGAGGAGAGCCTGGCTGCTGTTGCAGGGATGTTTAGCAGCAAAGCCAATGGTATTGAATGGAGTCTAGATAATGATGTATCCAAT GCCGCAGTGTTAGTTGCCAGTGAAGGACATGCCATAACTTTGGCAATTGAAGGCTTGTTAGGGGTTGTCTTCACTGTTGCAACTTTAACAGATGAAGCCA TAGATGTTGGAGAGCTTGAGTCCCCGAGAGGTGATAATGATCCACCAGTAAAATGGACTGGTAAAATTGCAGTTCTCTGCATTTCAATGGTTGACTCGCT ATGGTTGACAATACTCGATTCATTATCCCTTATTCTATTGAGGTCACAAGGAGAGGCCATTGTATTGGAAATATTAAAGGGATATCAGGCATTCACTCAG GCTTGTGGGATTCTCCGAGCAGTAGAACCTTTAAACTCGTTTCTTGCATCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_191081; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_304681
| Blastp | Protein MON2 homolog from Sophophora with 24.66% of identity |
|---|---|
| Blastx | Protein MON2 homolog from Homo with 28.95% of identity |
| Eggnog | MON2 homolog (S. cerevisiae)(ENOG410XQA8) |
| Kegg | Link to kegg annotations (Dmel_CG8683) |
| CantataDB | - |
| Mirbase | lja-MIR7529 (MI0024411) |
| Ncbi protein | Link to NCBI protein (XP_019439975.1) |
| Pfam | Dimerisation and cyclophilin-binding domain of Mon2 (PF16213.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |