Ll_transcript_306358

• Id Trinity: TRINITY_DN52230_c1_g2_i1
• Name Transcript: Ll_transcript_306358
• Sequence: AAAATATGGTTTGGAAATTGGAAGGATGAGGTGAGATGGTAAATCCATTGTTCATAATTGTACTAAAAAACACCATTGTTCAAAGACACTGGATCCAGCT TTTGACACTGAAAACTCTTCTCCAAGCCTTCTACGTTCCTCACTCCCACGAATCTATAATACTCTATGCATTCATTTCATTGATCTAATCTCAAATCACA AATCTTAAACCCACCTTAATCTCCCACAACATCAAAAATCCCAATTCTGCATCAAAGTTTCAATCTTTACCTTTTTTCCCCACAACTCAATTTCACTCAA TTCCTTCATTCATCAATGTCACACGTTCTACACCAAAGACCTCTCCAAAACCCATTTTCTAACCCCTTCTCTTTCTCACCACCTTCTTCCACAAATCCCA AAAGACCCATTTCCCTTTTTACCCCTACAACCCTCCTTGCCCTTTTACTCTTCATCATTGTAGTGGGTTTCTTATGCCCTTGGGTAGGACTTATGCCCCA AAACATGATATTTTCCTCTGTTTCAAAACCTTATTCTGTTGTTTCTTCCAAATGGGGTCACTATACATTGGACAAAGCATTGAACTTTGTGGCCAAAAAT GGGACTGTGATTGTTTGTATTGTGAGCCAGCCTTACTTGCCCTTTTTGAATAACTGGTTGATTAGTGTTACTAGACAGAAGAGACAGGATATGGTTCTTG TTATAGCTGAGGATTATGCTTCTTTGGATAAGGTTAATGAGCATTGGCCTGGCCATGCTGTACTTATTCCTCCTGTGCTTGATGCTGAAAATGCTCATAA GTTTGGTTCTAAGGGTTTCTTCAACTTTACTGCCAGGAGGCCAAGCCATCTGCTGAAGATTTTGGAGCTTGGATATAATGTAATGTACAACGACGTTGAT ATGGTTTGGTTGGCTGATCCACTTGCTAAATTGGAAGGGAACCATGATGTGTACTTTTCAGATGATATGACTGCTATCAAACCATTGAACCATTCTCATG ATTTACCACCACCAGGAAAAAAGGGCCGCCCTTACATATGTAGTTGCATGATTTTCCTTCGCCATACTGGTGGAGCAAAGCTAGTGTTGAAAAAGTGGCT TGAGGAACTTCAGCTTCAGCCATGGTCTAGGGCCAAGAAATCGAATGATCAGCCTGCTTTTAACTGGGCTCTAATGAAGACTGCAAAAGAGGTGGATATG TACCTTCTGCCACAGGCTGCATTCCCTACAGGCGGATTATATTTCAAGAACAAGACATGGGTTAAGGAAACTAAAGGATTACATGTTATAATCCATAATA ACTACATCGTAGGTTTTGAGAAGAAGATAAAGCGATTTCGTGATTATGGCCTCTGGTTGGTAGATGATCATGCAGATGAGTCTCCTCTAGGCAGACTATG ATCTAGATTAAACAAGTTTATCATCATCAACTTAGGTCCAAGCATTTAGATTCAGAACATACATTCTGCTAATCTGTTCGTCCTGCTTGCTCGTGGACGT TGTCTGAAGACATTTGGTGATTGCCAATCACCAAATGATGGGTTGACAAACTTGATCTTCGGTTTTCCAATATGTGAAGAAAAATGTGCTTACAAATGGC TGATTTTGTTTCAAGGTCCTAAGAAGAAAAGGGTGGTTGTTAGGATCCAAAATAAGAATCCTATTTGATAGTATTAGTTCTAGAATAAAATAAATAAGAT CCTATTTGATAGTATTAGTTTTAGAATAATATAAATAAGATCATATTTGATAGTATTAGTTTTAGACCTATTTGGGTCAGACTTATTTAGTTAGTAGGAT TAGAATAATATAAATAAGATGATTCT
• Tissue: pods
• Gene name: LI_gene_191104;
• Additional information: details;

Expression of Ll_transcript_306358

FPKM

• PAB: 2
• PNAB: 9.6
• PS1: 10
• PS2: 5.4
• PS3: 7.6
• PW1: 5.6
• PW2: 4.1
• PW3: 2.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_306358

• Blastp: UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 from Arabidopsis with 74.58% of identity
• Blastx: UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 from Arabidopsis with 82.27% of identity
• Eggnog: BEST Arabidopsis thaliana protein match is RGXT1 (rhamnogalacturonan xylosyltransferase 1)(ENOG4111Z77)
• Kegg: Link to kegg annotations (AT4G01220)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460054.1)
• Pfam: Nucleotide-diphospho-sugar transferase (PF03407.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;