| Id Trinity | TRINITY_DN52230_c1_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_306363 |
| Sequence | GTTTTGTTGTGGTATTTTTATGTGATATGTAACCACAACACAATTGTGGGGTGATGCAGTTGGGGCATAAGCACAAGTGTAATATTGCAGCTCTGCAATA TAGAATCTTGCTTGGTACACTCATTTACGTCTTGTTAAGATGCCCCAATAATTACATAGACGATAGGATCTTATTGCATCTGTAATACCTATTGCCGACT TTGTGTATCTTATAGCCATGTCGTGTCCTTATGATGTTTAGGACTTCCCATATTTGTGTATCAATGTTGTGTAGTATCCATGTTCAATCATATTTTACCT ATTTTCTGTCTTAAAAATGTGCTTTTGTGATCTGTTGATTTGAATAAATGTTACTATCTTGGATGCCTCATGGAAATGTAAAGGTATATTTGTCATCTGA GGTGGTAGTTTTCACGGTTATGCCTGTGGTGGTATTAATTGTTTGATCCATTCTTTCCGAGTGGGTGCTGATTTTCATGCTTATGTGTGCGGTGGTATTA ATTACTGAATCCTTTGTTTGTTTCACCACATAGGGTTTCTTCAACTTTACAGCCAGGAGGCCAAGCCATCTGCTTAAGATTTTGGAGCATGGATATAATG TAATGTACAATGATGTTGATATGGTTTGGTTAGCTGATCCACTTGCTAAATTGGAAGGGAATCATGATGTGTACTTTACAGATGACATGACAGCTGTAAG TTTCCTATTTGATTTGATTTCTTTTTTATGCTTTCTGTCGATTTTTTATCGTAATGACTCCGAGTTACTTCAATGCTGGGAACTTTTTGGCCAGGATGAT ACTTTTACTGTGTGCTCACTTCTCAATAGCCATGGTTAATATTGCCTCTATTGGTGTGACACTTTTATTAAAACTTGAATGAGATTTGAGTTTGTAGTTT AATGATCTTTAAGCAGCTTATTTATTTTATTATGTTATGATTTTGTCAGAGGAAGATTCAGTGCAATCTTATTGAAATGTAAAGGTATATTTGTTTTATT ATGTTATGCACGATCAATAGTTCCATATTGTTGGGCCTAAAGAATATACCAGTAAAACGGATGTCTTGTGTAATAAATTCTGAAGAGACTTTGGACTGCT CTTGTTTTATCCTCCTTTCATTCATGTACATTGACTTATGACTAGCACATGAATGTAGTGTTAATGTTTGTGGCGGGTAGAATCCAAACATCAGTAGCCT GTATCCTGATTCAACTCCTTTTTGTGAATTTTATGGTGCACGAGCTCCCACCTAGTAATGCCGGGTAGGGTAGATATACACAGCTTTACCATCGGAAGGA TTTTGTGAATCCTGTGAATCAAATATATGCAGAGGAAACATGTTAAGATCCAGGATAAAACATTACTTGAAATAGACATGTCGAAGTTCAATTGATATAG ATCTTCTACAAGATTCTTGTGAATCGGACTGATACTTTTTTATTCTTCCCTTCTGAATATATGCTGCAGTCTTAGTGTGCTTCTGTTTTTGTTATTGTAT TATTAACTATGATTTATTTTATTTCTTTGTGAGATCAGATCAAACCATTGAATCATTCTCATGATTTACCACCACCAGGAAAAAAGGGCCGCCCTTACAT ATGTAGTTGCATGATTTTCCTCCGCCCTACTGATGGAGCAAAGCTAGTTTTGAAAAAGTGGCTTGAGGAACTTCAGCTTCAGCCCTGGTCTAGAGCCAAG AAATCCAACGATCAACCGGCTTTTAACTGGGCTCTAATGAAGACTGCAAAAGAGGTTTTTACATTGTTTTTAATTTCCTTCCAGTTTGTATAACTTTCAT AAACTACAACAACAACCAAACCTTTATCGGTCGGCAACATGGATCGAACAATGTGTCGACGCCATAATGCTCTATAGTAAATCATGTTTATGGGCAAAGC AGAGAACAATGTCAATGCAGGAAGGGGTTTTTTGTGATGCATAATGAATACATAGCCCAAAATCCTTTTATAAATGAAATGCTAAAAATAAACTGACAAG TTTATTGACACTGGAAAATGTGCATTGCACTTTTCTTCTGTCATCCTAGCCCCCAAATGTTCTCGCGCTTCAATGGTTCCAAGATTTGTAATTATGTGCT AAAAGCTTGATCTCAAAACTGATATATAACCAGTTTTAAATGATTGAGTACATTTTCCCCAAGAGTGCGTGGATTTGTTTTTAATTCTTTAGAGCATCTG AAATTAGATTTATTCCCCCTTTTCTATGATATTTTTCCGGTGACTTCATGCAGGTGGATTTGTACCTTCTGCCACAGGCTGCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_191104; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_306363
| Blastp | - |
|---|---|
| Blastx | UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 from Arabidopsis with 72.73% of identity |
| Eggnog | BEST Arabidopsis thaliana protein match is RGXT1 (rhamnogalacturonan xylosyltransferase 1)(ENOG4111Z77) |
| Kegg | Link to kegg annotations (AT4G01220) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462553.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |