Ll_transcript_306369

Id TrinityTRINITY_DN52230_c1_g2_i7
Name TranscriptLl_transcript_306369
SequenceCTCATCTCCAGGCTTTCTAGTTACTCGCACCACTATCACTCCCACAAACCCACGCTCTATAAATTCATTTCATTGATCTGATCTCAAAACCCAAATCTCA AACATTACACACAAAAAATAATCCTAATTTCACATCAAAGTTTCAATCTTGACCTCTTCCCACAAATTTCATTCCATATTTTTTCATTCATCAATGTCAC ACATTCTTCACCAAAGACCTCTTCAAACCCCATTATCTCACTCCTCTTTCTCACCACCTTCTTCCACAAATCCCAAAAGACCCATTTCCCTTTCTACCCC CACAACCCTCCTTGCCCTCTTACTCCTCATTTTGTTCATGGGTCTCTTATGCCCTTGGCTAGGTCTTATGCCCCAAAATATCATCTTTTCAGTTTCAAAC TCTTATTCTTATTCTTCTTCCAAATGGGGTCACTACACATTGGACCAAGCACTGAACTTTGTGGCAAAAAATGGGACCGTGATTGTTTGCATTGTGAGCC AGCCTTACTTGCCCTTTTTGAATAACTGGTTGATTAGTGTTACTAGGGAAAAGAGACAGGACATGGTTCTTGTTATAGCTGAGGATTATGCTTCATTGGA TAAGGTTAATGAGCGTTGGCCTGGTCATGCTGTGCTCATTCCACCTGTGCTTGATGCTGAAAATGCTCATAAGTTTGGTTCTAAGGGTTTCTTCAACTTT ACAGCCAGGAGGCCAAGCCATCTGCTTAAGATTTTGGAGCATGGATATAATGTAATGTACAATGATGTTGATATGGTTTGGTTAGCTGATCCACTTGCTA AATTGGAAGGGAATCATGATGTGTACTTTACAGATGACATGACAGCTGTAAGTTTCCTATTTGATTTGATTTCTTTTTTATGCTTTCTGTCGATTTTTTA TCGTAATGACTCCGAGTTACTTCAATGCTGGGAACTTTTTGGCCAGGATGATACTTTTACTGTGTGCTCACTTCTCAATAGCCATGGTTAATATTGCCTC TATTGGTGTGACACTTTTATTAAAACTTGAATGAGATTTGAGTTTGTAGTTTAATGATCTTTAAGCAGCTTATTTATTTTATTATGTTATGATTTTGTCA GAGGAAGATTCAGTGCAATCTTATTGAAATGTAAAGGTATATTTGTTTTATTATGTTATGCACGATCAATAGTTCCATATTGTTGGGCCTAAAGAATATA CCAGTAAAACGGATGTCTTGTGTAATAAATTCTGAAGAGACTTTGGACTGCTCTTGTTTTATCCTCCTTTCATTCATGTACATTGACTTATGACTAGCAC ATGAATGTAGTGTTAATGTTTGTGGCGGGTAGAATCCAAACATCAGTAGCCTGTATCCTGATTCAACTCCTTTTTGTGAATTTTATGGTGCACGAGCTCC CACCTAGTAATGCCGGGTAGGGTAGATATACACAGCTTTACCATCGGAAGGATTTTGTGAATCCTGTGAATCAAATATATGCAGAGGAAACATGTTAAGA TCCAGGATAAAACATTACTTGAAATAGACATGTCGAAGTTCAATTGATATAGATCTTCTACAAGATTCTTGTGAATCGGACTGATACTTTTTTATTCTTC CCTTCTGAATATATGCTGCAGTCTTAGTGTGCTTCTGTTTTTGTTATTGTATTATTAACTATGATTTATTTTATTTCTTTGTGAGATCAGATCAAACCAT TGAATCATTCTCATGATTTACCACCACCAGGAAAAAAGGGCCGCCCTTACATATGTAGTTGCATGATTTTCCTCCGCCCTACTGATGGAGCAAAGCTAGT TTTGAAAAAGTGGCTTGAGGAACTTCAGCTTCAGCCCTGGTCTAGAGCCAAGAAATCCAACGATCAACCGGCTTTTAACTGGGCTCTAATGAAGACTGCA AAAGAGGTTTTTACATTGTTTTTAATTTCCTTCCAGTTTGTATAACTTTCATAAACTACAACAACAACCAAACCTTTATCGGTCGGCAACATGGATCGAA CAATGTGTCGACGCCATAATGCTCTATAGTAAATCATGTTTATGGGCAAAGCAGAGAACAATGTCAATGCAGGAAGGGGTTTTTTGTGATGCATAATGAA TACATAGCCCAAAATCCTTTTATAAATGAAATGCTAAAAATAAACTGACAAGTTTATTGACACTGGAAAATGTGCATTGCACTTTTCTTCTGTCATCCTA GCCCCCAAATGTTCTCGCGCTTCAATGGTTCCAAGATTTGTAATTATGTGCTAAAAGCTTGATCTCAAAACTGATATATAACCAGTTTTAAATGATTGAG TACATTTTCCCCAAGAGTGCGTGGATTTGTTTTTAATTCTTTAGAGCATCTGAAATTAGATTTATTCCCCCTTTTCTATGATATTTTTCCGGTGACTTCA TGCAGGTGGATTTGTACCTTCTGCCACAGGCTGCATTCCCTACAGGCGGATTATATTTCAAGAACAAGACATGGGTTAAGGAAACTAAAGGAAAGCATGT TATAATTCATAATAACTACATCGTAGGTTTCGAGAAGAAGATAAAGCGATTTCGTGATTATGGCCTCTGGTTGGTGGATGATCATGCAGAAGAGTCTCCT CTAGGCAGATTATGATCCTTGGTAGATTAGACAAGTTTATCATCATCAACTTTGGTCCAAGCATTTAGATTCAGAACATGCTTCCTGCTAATTGTTCATC CTTCTTGCTCGATGGACGTAGTTGGAAGAATTATAACTCTTGCTGTCGACACATCCCATTCGTGGGATGCAGGATTGGCAAATATGATCTTTTGTTATCA TTTTTGTGAAGAAAAATGTATTTACAAATGACAGATTTTGTTTCAAGGTCCCTACAAGAAAAGGGTGGTAGATTTCCTTTGTTTCTTGATGTACAATGGT CTTCTAGAGAGGAAAAATGTGGTTCTAATGTAAGCAATACTGAATTAACATATATGAAATATATTTTGTTCAGTTCCCC BLAST
Tissuepods
Gene nameLI_gene_191104; 
Additional informationdetails; 

Expression of Ll_transcript_306369

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_306369
BlastpUDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 from Arabidopsis with 59.68% of identity
BlastxUDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 from Arabidopsis with 59.68% of identity
EggnogBEST Arabidopsis thaliana protein match is RGXT1 (rhamnogalacturonan xylosyltransferase 1)(ENOG4111Z77)
KeggLink to kegg annotations (AT4G01220)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019462553.1)
PfamNucleotide-diphospho-sugar transferase (PF03407.15)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;