| Id Trinity | TRINITY_DN52231_c3_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_306488 |
| Sequence | AATTTATGTATCTATTTCCTCTCACATTTCCCGCGCACTTTCCCCAAATATCTTCTCAATTTCCCGCTTCTACTCTCTTTTCTTCTTCTTCTTTTTTCGA ATTTTAAATATTTAATTTGATATGATATTACACCCTCAAACTACAACTTGGTGCGTGTGTTAACTCTCAAGTCTTAAATTTCATAGCAATTTCACTATTA CTTGGAAAAACTCCATGAACTGTCGCGAGGCTACTGTAGCTGCCACTGCTACAATTATCGGTGCGTTGGCCTCCGCAATCGCATTCCGTTTCTTTTACCG TTCCCATTCATCCAAATCCATTCCCTTTCAAAACCACACCGTCTCCAATAACCGCTCTTCAATCGACCCTTTTGACCCTTCCAAGCGCAAAGGATACTTG TCGTGGGATGATTATTTCATGGCAATTGCATTTTTGTCAGCTGAAAGATCCAAAGACCCTAACAGACAGGTTGGGGCGTGTTTGGTGAGCCAAGATGGTA TTATCCTTGGTATTGGATATAATGGATTTCCAAGAGGTTGTGCTGATGACAAGCTACCATGGGCAAAGAAATCCAGGACTGGGGATCCTCTGGAGACGAA GTACCCGTAAGTGTTTGGTTTCACATGTTCACTCTGCTTGAAACGTTAGTTAGTATGTTTAATTCCAAACATTTGCATTTTGTTCTGCCTTCAATCTTGT GTGTGGTTTAGCTATGTTGTTGTCATTGTATTTTTTTCATTTAACAAGATTTCGTTGAGAATGTTGTGTCTATTTTAGATATGTTTGTCACGCAGAAGTA AATGCTATTCTTAACACAAATCATGCCTCTGCTGCTGGACAACGGCTATATGTAACCATGTTTCCTTGCAATGAATGTGCTAAAATCATAATCCAGTCAG GAGTTTCTGAAGTCATTTATTTTGTAGAGAAGAGGTTAGAAAATTCAGATATTGCATATATAGCCTCTCATAAGCTACTTTCATTGGCTGGTGTAAAGGT GAGGAAACACCAACCACTGATGAATGAAATTCGCTTGAAGTTTGAAGAGCGCTAGATTTTGAAGCTTAGCATAAACTTAGCCTATGTTCTCGGAGTCACT ATTTTCAGAGTTACTGAAATAGCTTTATCGATTCTGAAATTCTTCTATTGCAGAAGAGAACCTATATTCAAATGGCTCCACAAACCAAATAAGAACGAAC AGTGATAGCATCTTTTGATCCTTCATTGTTACTCTGTACTTTAGCAAATAACCTTGTACCAAGTAAAGTGATAATTAAACATGCTATATGCAAAATCATC TTTAGACAACTCTGAAGGGAGGATCAAGGCTAAGTAAGAAATGTTTATTGTCATTCCATTGTGTTTACTACCTACCACTTCTATTGCATTATTGTATTCT ACTTTTTTTGATCTGATAGTTCAAAATAACTAACTTGATAAGAAGTTTATGTAACAGGAGTTGCAATAGACAAACCCAGTTTAGTAAAATGTGTGCAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_191116; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_306488
| Blastp | Deoxycytidylate deaminase from Pongo with 61.33% of identity |
|---|---|
| Blastx | Deoxycytidylate deaminase from Pongo with 61.04% of identity |
| Eggnog | dCMP deaminase activity(COG2131) |
| Kegg | Link to kegg annotations (100457791) |
| CantataDB | Link to cantataDB annotations (CNT0000426) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463479.1) |
| Pfam | Cytidine and deoxycytidylate deaminase zinc-binding region (PF00383.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |