Ll_transcript_304605

• Id Trinity: TRINITY_DN52232_c0_g1_i6
• Name Transcript: Ll_transcript_304605
• Sequence: CTGTTTTCTTCTGTGTGTAATCTTGGTCTTTTTCATTTCATGCAACCCTCAATATTTGTAACAATCATTAGAAAAAACTTGGAGTTGTAAAAGTTTCAAG GAAAACTCAGTTCAACAACTAAAACAATGGAGTTAACTCCAAAGTTAACTCCAAGAGGAAGAACTCAAGGCCATGTATTAACCTTTGATAGAGATGCAGA TTCATATGTGGAGGAAGATAAGGAGCTTCAATCAAAATGGGCTGCAATTGAGAAATTACCAACTTTCAAAAAGATTCAAACTTCTTTTGTTGATGTTAGT CAAGATGAGGAAGGTGGAAGCACTAGCAAAGAAGTAGATGGAAAAAGGGTTGTTGATGTTACTAAGCTTGGTGCTGTGGAAAAGCGTTTGTTTATTGATA AGCTCATCAAGCACATTCAAAATGATAATCTTCAGTTGCTGCAGAAACTTAGGGAAAGGATGGAAAGAGTGAATGTGAAGTTACCTACTGTGGAAGTTAA GTACAAGAACTTGCATGTAGAAGCAGAATGTGAGGTTGTTCAAGGGAAGCCACTGCCTACTCTATGGAACTCTTTTACTAGCTCATTTTCAGGTTTTGTG AAGACTGTATCATGTAATACACAAGAAGCCAATGTAAGCATTCTGAATGATGTTAGTGGCATCATAAAACCATCAAGGCTTACTCTTCTTCTTGGTCCAC CTGGCTGTGGGAAAACAACCTTCTTAATGGCACTGGCTGGAAAACTAGACCAATCTCTGAAGGTTTCTGGAGAAATTTCTTACAATGGTTACAAGCTAGA TGAATTTGTTCCTCAAAAATCATCAGCTTATATAAGCCAGTATGACCTGCATGTTCCCGAGATGACAGTGAGAGAAACAATTGACTTTTCGGCACGCTGT CAGGGGGTTGGAAGTAGAGCTGATATAGTGGCTGAAATCACCAGGAAAGAAAAAGAAGCAGGAATCATCCCAGACCCAGATATTGACACCTATATGAAGG CAATTTCAGTTGAAGGACAAAGCGAAAATCTTCAAACAGAATATGTTTTAAAGATTCTCGGACTCGATATGTGTGCTGACACACTGGTTGGTGATGCATT AGAAATAGGCATTTCAGGTGGACAAAAGAAAAGATTGACTACAGGAGAGATGATTGTTGGTCCCATTAAAGCTCTTTTCATGGATGAAATATCCACTGGC TTGGACAGCTCCACAACCTTTCAAATAGTTACCTGTCTCCAGCAATTGGCGCATATAACAGATGCAACTGCAGTGCTTTCACTCCTTCAACCGGCTCCAG AAACCTTCGAATTATTTGATGATCTTATATTGATGGCAGAGGGGAAGATAGTATACCATGGCCCCTGCAGTCAAGCACTCCAATTTTTTAATGATTGTGG TTTCTGGTGCCCAGAAAGAAAAGGAGTAGCAGATTTTCTTCAAGAGGTAATCTCTAAGAAGGATCAAAGCCAATACTGGTACCGGATGGATGTTCCTTAC AACTATGTTTCAGTGGATCAGTTCTCAGAGATCTTCAAAGAAAGTTATTGGGGTAGAATGTTAGATGATGAGGTCTCACAGCCATCTGATAAATCTCAAT CCCATAAAAATGCTTTATCATTTAGCAAGTATTCCTTGGGAAAATGGGATTTGTTTAATGCTTGTATGAGGAGGGAGATTCTTCTCATGAAGCGAAACTC GTTTATATATGTTTTCAAAACTGTACAGCTCACAATCACTGCAATCATAACAATGACGGTCTTCATACGCACTCAACTGGCTGTGGACATGATAAGTGCA AACTATTTGTTAGGTTCATTGTATTATACGCTTGTTCGCCTCATGACTAATGGAATTGCTGAGCTGATCATGACTATTACAAGACTTCCGGTTGTTGATA AGCAGAAAACATTCTATCTTTATCCAGCATGGGCTTATTGTCTTCCAGCTTCCATTCTAAAGATTCCATTCTCAGTTCTTGATAGTATTGTGTGGACATC AGTAACATATTATGTTATAGGCTACAGCCCTGAAGCATCAAGGTTCTTCCGCCAGTTCCTTTTGCTTGTTGTTTTGCATATGTCATCAACCTCCATGTGT CGTTGTCTTGCCTCCGTTTTCAAAACTGATCTTATGGCTTCAAATGTTGGTTCGTTGGTGTTAGTACTGATGTTCTTGTTTGGAGGCTTTATTCTTCCTC GACCATCACTACCATCATGGTTGAGGTGGGGTTTTTGGCTTTCTCCTATGTCATATGGGGAAATAGGAATAACACTAAATGAATTTCTTGCTCCTCGTTG GCAAAAGATCCAAGAGGGAGGCATCACTGTTGGAAGGAAGGTTTTAATTAGTCATGGTTTAGACTTCCATGCCAACTTCTACTGGATATCTGTTGGAGCC TTACTTGGTTTCACAGTACTTTTTGATTTTGGATTTATCTTAGCATTAACTTACATAAATCAGCCGAAGATGTCTCGAGCTTTAGTTTCAAAAAAGAGGC TCTCTCGGCTGAAGGGAGGAGAAAAAGACAACAATGTGGAACTAAAATCAATTACAGTTGATATCAAGAGCACACCAAGGGGAACTCAAAGTACAGGGAA AATGGTCCTGCCCTTTGAGCCACTGACAGTAGCGTTCAAGGATGTCCAGTACTTTGTTGACACCCCTCCGGAGATGAGAAAACACGGTTCAAATGAGAAA AAACTACAATTGCTCCGAGATGTCACAGGAGCCTTTAGGCCAGGAATTCTTACTGCACTGATGGGAGTGAGTGGAGCAGGGAAGACAACTCTCATGGATG TCCTTTCAGGAAGAAAAACTGGAGGTATCATCGAAGGGGATATAAGAATTGCAGGATACCCGAAAGTGCAGAAGACATTTGAAAGAGTTTCTGGTTACTG TGAGCAGAATGACATACATTCTCCATATATAACAGTTGAAGAATCTGTCACATACTCAGCTTGGCTGCGGTTGCCAAGGGAGATTGATTCGGTCACAAAA GGGAAATTTGTGGAGGAAGTCCTTGAAACAATTGAGCTTGATGATATAAAGGATTGCCTAGTTGGGATCCCTGGCCAAAGTGGCTTATCTACCGAACAAC GTAAAAGACTTACCATTGCAGTAGAGCTTGTTTCCAATCCATCAATAATCTTTATGGATGAACCAACATCAGGCTTGGATGCACGAGCAGCTGCAGTTGT TATGCGTGCAGTGAAGAATGTTGTTGGCACTGGCAGGACCACAGTTTGCACTATACATCAACCAAGCATTGACATATTTGAGACTTTTGATGAGTTGATT CTAATGAAATCTGGAGGACAGATAATTTACAGTGGTACACTAGGCTATCAATCAAGCAAACTGATAGAATATTTTCAGAGTATACCTGGAGTGCCAAAGA TCAAAGACAATTATAATCCTGCAACATGGATGTTGGAAGCTACCTCTGCATCTATAGAAGAAGAACTTAAAGTAGATTTTGCAAAAATCTATCAGGAGTC AAATCTTTACCAGGAAACCCTTGAATTGGTGAAAGAATTAAGCCAACCATGGCCAGGTTCAAGCGACTTACACTTTTCAACCCGATTCTCACAGAATATC GTGGGGCAGTTTATGGCATGCCTATGGAAGCAACACTTGTCCTATTGGAGAAGTCCTGAATATAACTTATCACGTTTCATATACATGGTTGCTGCAGCAG TAATATTTAGTGCGGTATTTTGGCAGAAAGGGGATAAAATAAACAACCAACAGGATTTGTTCAATGTACTTGGATCATTGTACATTGCTGTAATATTCCT GGGTATAAATTACTGTTCAACAATTCTACCATACGTGTCAACCGAACGCAGTGTCTTGTACCGAGAAAAATTTGCTGGAATGTATTCTTCCATGGCCTAT TCATTTGCACAGGTGGCTATTGAAATACCATATATCTTATTGCAATCAATTCTGTATGTGGCTATCACATATCCAATGATAGGTTTCCATTGGTCAGTTG AGAAAGTGTTTTGGTACTTCTACTCCACATTCTGTACATTTTTGTACTTCGTATATCTTGGAATGCTGATAATGTCATTGAGCATAAATCTGGATATAGC TGCTGTATTGTCAACTGCAGTCTACACAATATTCAATCTCTTTTCTGGATTCCTCATGCCAGGACCGAAAATTCCTAAATGGTGGGTTTGGTGCTACTGG ATAACCCCCACAGCTTGGTCACTGAATGGACTCCTAACTTCACAATATGGAGACCTGGATAAGGAAATACTCATATTTGGGGAGAAAAAACAAGTTGGTT CTTTCCTAAGAGATTACTATGGTTTCAGACATGACAGATTAAGCATTGTGGCTGTGGTGCTCATTGCTTACCCCATTGTTTATGCATCTCTCTTTGCCTA TTGCATAGGAAAAATGAATTTCCAAAAGAGATAGAGACTTACAGATTCCTTCTTCTTCTGCAGTATGGCTGCTACAGTTTTCATGTATATAGAAATACAT TGCTATATCAATGAGCAAGATCTCTCTTATAAGATTTATATATTTTTGTTTTAAAAGTTGTTTTCTTCCTTCTATTGATTTATTTTTACATATAAGCTAG TTATATAATGATGAAGAATATATCCAATCTGTACAAGTTGAGAACAATAAAAATGAGACTATTTTTG
• Tissue: pods
• Gene name: LI_gene_191125;
• Additional information: details;

Expression of Ll_transcript_304605

FPKM

• PAB: 0.6
• PNAB: 0.3
• PS1: 0.1
• PS2: 0.5
• PS3: 0.8
• PW1: 0.7
• PW2: 1.6
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_304605

• Blastp: Pleiotropic drug resistance protein 3 from Nicotiana with 64.21% of identity
• Blastx: Pleiotropic drug resistance protein 3 from Nicotiana with 64.21% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (107764055)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463336.1)
• Pfam: ABC-transporter extracellular N-terminal (PF14510.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;