| Id Trinity | TRINITY_DN52232_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_304607 |
| Sequence | ATTTTATCTTACATAAGTAATGAATTAATTTTTTTCTAGAGTATATGGTTGTTCTCCGACAAATTTTGCTAATAAAATCTTTCACTTTTTTTGTCTCTAG TGAAGTCTTATACTACTATGTCAATGTTGATCGTACAAAACATTATTAAAAGAACCTTTGATAATCATTGACCATAGTGGATTGTTTCCACATAAAGGGG TCACTGCCATTCTAGTTAAGTGCTGGCTGCATTAGCAATCTCATTAGAAGTAGAAAAATATACACAACAGTTGTGTTTAGTAGTCTTTGTCTTTTTCATT TCATGCATCCCCCCAAAATCTGTAACAATCATTGGCAAAGCTTAAGCTCTTTTCATCAATCACAATAATGGAGTTAACACCAAAGTTAACTCCAAGAGGA AGAACTCAAGGCCATGTTTTGACCTTTGATAGAGATGCAGATTCATTTGTGGATGAAGATAAGGAGCTTCAGTCAAAGTGGGCTGCAATTGAGAAATTAC CAACTTTCAAAAGGATTAAGACTTCTTTTGTTGATGTTAGGCAAGATGGTGAAGAGGGTGGAAGCACTAGCAAAGAAGCAGATGGAAAAAGGGTTGTTGA TGTTACCAAACTTGGAGCTGTGGAAAAGCGTTTGTTTATTGATAAGCTCATCAAACACATTCAGAATGATAACCTTCAGTTGCTGCAAAAACTCAGGGAA AGGATGGAAAGAGTCAATGTGAAGTTACCTACTGTGGAGGTTAAGTACAAGAACCTGCATGTAGAAGCAGAATGTGAGGTTGTTCAAGGGAAGCCACTGC CTACTCTATGGAACTCTTTTACTACCTCGTTTTCGGGTTTTGTGAAGACTATATCATGTAATACACAAGAAGCCAATGCAAGCATTCTGAAAGATGTCAG TGGCATCATAAAACCATCAAGGCTTACTCTTCTTCTTGGTCCACCTGGCTGTGGGAAAACAACCTTCTTAATGGCACTGGCTGGAAAACTAGATCAACCT CTCAAGGTTTCTGGAGAAATATCTTACAATGGTTACAAACTAGATGAATTTGTTCCTCAAAAATCATCAGCTTATATAAGCCAGTATGACCTGCATGTTC CTGAGATGACAGTAAGAGAAACAATTGACTTTTCGGCACGCTGTCAGGGGGTTGGAAGTAGAGCCGATATAATGGCTGAAATCACCAGGAAAGAAAAAGA AGCAGGAATCATCCCAGACCCAGATATTGACACCTATATGAAGGCAATTTCAGTTGAAGGACAAAGCGAAAATCTTCAAACAGAATATGTTTTAAAGATT CTCGGACTCGATATGTGTGCTGACACACTGGTTGGTGATGCATTAGAAATAGGCATTTCAGGTGGACAAAAGAAAAGATTGACTACAGGAGAGATGATTG TTGGTCCCATTAAAGCTCTTTTCATGGATGAAATATCCACTGGCTTGGACAGCTCCACAACCTTTCAAATAGTTACCTGTCTCCAGCAATTGGCGCATAT AACAGATGCAACTGCAGTGCTTTCACTCCTTCAACCGGCTCCAGAAACCTTCGAATTATTTGATGATCTTATATTGATGGCAGAGGGGAAGATAGTATAC CATGGCCCCTGCAGTCAAGCACTCCAATTTTTTAATGATTGTGGTTTCTGGTGCCCAGAAAGAAAAGGAGTAGCAGATTTTCTTCAAGAGGTAATCTCTA AGAAGGATCAAAGCCAATACTGGTACCGGATGGATGTTCCTTACAACTATGTTTCAGTGGATCAGTTCTCAGAGATCTTCAAAGAAAGTTATTGGGGTAG AATGTTAGATGATGAGGTCTCACAGCCATCTGATAAATCTCAATCCCATAAAAATGCTTTATCATTTAGCAAGTATTCCTTGGGAAAATGGGATTTGTTT AATGCTTGTATGAGGAGGGAGATTCTTCTCATGAAGCGAAACTCGTTTATATATGTTTTCAAAACTGTACAGCTCACAATCACTGCAATCATAACAATGA CGGTCTTCATACGCACTCAACTGGCTGTGGACATGATAAGTGCAAACTATTTGTTAGGTTCATTGTATTATACGCTTGTTCGCCTCATGACTAATGGAAT TGCTGAGCTGATCATGACTATTACAAGACTTCCGGTTGTTGATAAGCAGAAAACATTCTATCTTTATCCAGCATGGGCTTATTGTCTTCCAGCTTCCATT CTAAAGATTCCATTCTCAGTTCTTGATAGTATTGTGTGGACATCAGTAACATATTATGTTATAGGCTACAGCCCTGAAGCATCAAGGTTCTTCCGCCAGT TCCTTTTGCTTGTTGTTTTGCATATGTCATCAACCTCCATGTGTCGTTGTCTTGCCTCCGTTTTCAAAACTGATCTTATGGCTTCAAATGTTGGTTCGTT GGTGTTAGTACTGATGTTCTTGTTTGGAGGCTTTATTCTTCCTCGACCATCACTACCATCATGGTTGAGGTGGGGTTTTTGGCTTTCTCCTATGTCATAT GGGGAAATAGGAATAACACTAAATGAATTTCTTGCTCCTCGTTGGCAAAAGATCCAAGAGGGAGGCATCACTGTTGGAAGGAAGGTTTTAATTAGTCATG GTTTAGACTTCCATGCCAACTTCTACTGGATATCTGTTGGAGCCTTACTTGGTTTCACAGTACTTTTTGATTTTGGATTTATCTTAGCATTAACTTACAT AAATCGTAAGTCTTATCTAAGTCATTCGCAGGGAAAAAATATCAGACATTTTATTTTGCTCAATTACTGATTTGATGCTAAATGTATTCAGAGCCGAAGA TGTCTCGAGCTTTAGTTTCAAAAAAGAGGCTCTCTCGGCTGAAGGGAGGAGAAAAAGACAACAATGTGGAACTAAAATCAATTACAGTTGATATCAAGAG CACACCAAGGGGAACTCAAAGTACAGGGAAAATGGTCCTGCCCTTTGAGCCACTGACAGTAGCGTTCAAGGATGTCCAGTACTTTGTTGACACCCCTCCG GAGATGAGAAAACACGGTTCAAATGAGAAAAAACTACAATTGCTCCGAGATGTCACAGGAGCCTTTAGGCCAGGAATTCTTACTGCACTGATGGGAGTGA GTGGAGCAGGGAAGACAACTCTCATGGATGTCCTTTCAGGAAGAAAAACTGGAGGTATCATCGAAGGGGATATAAGAATTGCAGGATACCCGAAAGTGCA GAAGACATTTGAAAGAGTTTCTGGTTACTGTGAGCAGAATGACATACATTCTCCATATATAACAGTTGAAGAATCTGTCACATACTCAGCTTGGCTGCGG TTGCCAAGGGAGATTGATTCGGTCACAAAAGGGAAATTTGTGGAGGAAGTCCTTGAAACAATTGAGCTTGATGATATAAAGGATTGCCTAGTTGGGATCC CTGGCCAAAGTGGCTTATCTACCGAACAACGTAAAAGACTTACCATTGCAGTAGAGCTTGTTTCCAATCCATCAATAATCTTTATGGATGAACCAACATC AGGCTTGGATGCACGAGCAGCTGCAGTTGTTATGCGTGCAGTGAAGAATGTTGTTGGCACTGGCAGGACCACAGTTTGCACTATACATCAACCAAGCATT GACATATTTGAGACTTTTGATGAGTTGATTCTAATGAAATCTGGAGGACAGATAATTTACAGTGGTACACTAGGCTATCAATCAAGCAAACTGATAGAAT ATTTTCAGAGTATACCTGGAGTGCCAAAGATCAAAGACAATTATAATCCTGCAACATGGATGTTGGAAGCTACCTCTGCATCTATAGAAGAAGAACTTAA AGTAGATTTTGCAAAAATCTATCAGGAGTCAAATCTTTACCAGGAAACCCTTGAATTGGTGAAAGAATTAAGCCAACCATGGCCAGGTTCAAGCGACTTA CACTTTTCAACCCGATTCTCACAGAATATCGTGGGGCAGTTTATGGCATGCCTATGGAAGCAACACTTGTCCTATTGGAGAAGTCCTGAATATAACTTAT CACGTTTCATATACATGGTTGCTGCAGCAGTAATATTTAGTGCGGTATTTTGGCAGAAAGGGGATAAAATAAACAACCAACAGGATTTGTTCAATGTACT TGGATCATTGTACATTGCTGTAATATTCCTGGGTATAAATTACTGTTCAACAATTCTACCATACGTGTCAACCGAACGCAGTGTCTTGTACCGAGAAAAA TTTGCTGGAATGTATTCTTCCATGGCCTATTCATTTGCACAGGTGGCTATTGAAATACCATATATCTTATTGCAATCAATTCTGTATGTGGCTATCACAT ATCCAATGATAGGTTTCCATTGGTCAGTTGAGAAAGTGTTTTGGTACTTCTACTCCACATTCTGTACATTTTTGTACTTCGTATATCTTGGAATGCTGAT AATGTCATTGAGCATAAATCTGGATATAGCTGCTGTATTGTCAACTGCAGTCTACACAATATTCAATCTCTTTTCTGGATTCCTCATGCCAGGACCGAAA ATTCCTAAATGGTGGGTTTGGTGCTACTGGATAACCCCCACAGCTTGGTCACTGAATGGACTCCTAACTTCACAATATGGAGACCTGGATAAGGAAATAC TCATATTTGGGGAGAAAAAACAAGTTGGTTCTTTCCTAAGAGATTACTATGGTTTCAGACATGACAGATTAAGCATTGTGGCTGTGGTGCTCATTGCTTA CCCCATTGTTTATGCATCTCTCTTTGCCTATTGCATAGGAAAAATGAATTTCCAAAAGAGATAGAGACTTACAGATTCCTTCTTCTTCTGCAGTATGGCT GCTACAGTTTTCATGTATATAGAAATACATTGCTATATCAATGAGCAAGATCTCTCTTATAAGATTTATATATTTTTGTTTTAAAAGTTGTTTTCTTCCT TCTATTGATTTATTTTTACATATAAGCTAGTTATATAATGATGAAGAATATATCCAATCTGTACAAGTTGAGAACAATAAAAATGAGACTATTTTTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_191125; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_304607
| Blastp | Pleiotropic drug resistance protein 3 from Nicotiana with 64.24% of identity |
|---|---|
| Blastx | Pleiotropic drug resistance protein 3 from Nicotiana with 64.32% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (107764055) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463336.1) |
| Pfam | ABC-transporter extracellular N-terminal (PF14510.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |