Ll_transcript_307187

• Id Trinity: TRINITY_DN52238_c7_g1_i1
• Name Transcript: Ll_transcript_307187
• Sequence: TCTCTCTCTCAGCGGACCAAAACACAGACACGTTTCTCTCCTCTCACTCACATGCACACAGCACACTCATCATCGAATTCAAAATCCCTAAATCCATTTC TCTGAATACTCATTTCAATTTCAACCTAATCATCATTATAATTCATTCAATTTCACACGATGCGAATTTTCAGAAAACTCACTACTCCCTCCAATTATCA TCACCATCATCAACTCCGATCCTACGTCTCAACCTGTCGCGCCGTCGTTCTCCCCTCATTCGGCGGCGCCGACAAGCTCCAGCTCCGTTCCGATGTTCCA GTCCCTCCTCTCAAACCTAACCACGTCCTCGTTCGAACACGCGCCGTTTCCATCAACCCCTTAGATACCCGAATGCGGTCGGGGTATGGGCGTTCGATTT TTGAGCCGTTGTTGCCGCTGATTTTAGGGCGGGATGTGAGCGGCGAGGTTGCGGCGGTTGGAGAATCGGTGCGATCGGTGAGTGTGGGTCAAGAAGTTTT TGGTGCATTGCATCCAACTGCAGTGAGGGGAACTTACACTGACTATGCTATTCTATCTGATGAGGAGGTTACTCCAAAACCAACTTCACTTTCACATGTG GTATGTGTCTATCTTTATGTCTTTTTTAGTTTTGTTATTTTTGGTAAATTGCACTGGCTTCATTGGGGTGTGAGTTAATTATAGCTGCTATAAGTGAATT TAGTTTCAATATCATCCTTTTGGGACCTATGTGCGTGATTCAATTGGAAAGGGCTTGAGTCTTTTTTTGGGTACAATCATTTCTTTTTCATTTGTGCATA GTATGAGACTAAATGTTGAAAGCTCAATTTTGGTAAGAGAATAAACTCGAAGTGGCATATTTGAGAGTGTTACGTTGGATGAGTGGACAGAGTAGACATT ATCGTAATATGAATGAATGCCTCACGGAGAAAGTTGGGGTAACTACTAGTGTAGAATAAATAGTAGAATTGCATCTGAGGCGGTTTGTGCATGTGTAGAG GAGATCATTAGAAGTCTTGGTAACGAGTAAATCAACTGGAGGTTAGTCCAATTTCTAGAGGCGGAGGGAGGTAAAGAAAAATCATAGGCGGAACAATTAG GAAATGTTCAGAGATCAATGCTTTGTGAATAGACATGATTTATAATAGATCATTACGATGTTGTTCCATTCATGTAGCCACCCCACTAGAGCTTGGTTGT TGCAGTTGTTATAAAGCATCACTGGTAGAGGTATCTGCTTGAAATATGAAACAGAGCTGTATATTAATTTATCTGTGCACAGGTTCAGCAATGATTTATT TTCTGTTATCAATCCATAACATTAATTGTAGTTTCATTATGTATCTGCCATTATTTGGAAAAACGTCCTTATTTTGTGATCTGGAGCAAGAAGACAACAT ACAAATTTGTGGTGTGCCCAAGGTGGGATTAACTATACTATAGGTTATATACAATACTTTGAAATTTAATTACTCCATATACTCATTACGTTGGATCAAT TCTTTTTCTTTCTTTCCCCAATCAAATTATGTGAGAGATCATTAGAATGAGATAAGCAACTTCTTATAGGTTATGTTTATTGGGAAAATTAGATGTCTGA TGCAAATGTTTCTAACATGTCCCTCAACTATATATTGTTCGAAAGTGTGCTTATATCTTGTATACCTATTTGACTCTGATAGAAATATGAAACAGACTGG GACCCAGTAGGCCTGATTTTTTTTGTATGTGTAGTTATTTTTTGGCATAGTTATATGTTTGTATGATAGTTATTGGTAGTATTTCTGTGTCTAGGGATGT GTGGGGTAGATATTCATTCTGGTATTTTGTCATGTGTTGATTGCAGGAGGGGAACTCCTTGTTCGGGGGAAACCCTGTATCTGTTGACTGTTTGAAGGAG GGAACTCCTTGTTAGGTGGAAACCCTGTGAAGTTGATTTGTTTTTTTTTTGTAATGTGAAATATGAACCAGATCATTCTAATAATATAAATATTTCTCTT GTCCAATTGGAGTCTAACACTCACCAAAGTGTGTGATATAACAATAATGTTTGTCTAGATATTTCCAATTCATTGGTATTACCATCACAATCATAAGTAC ATGCTAAAATACTGCAACTTTACAAGTGCTTTCAAGTTTCAAACATTTAACAAATGGTCACTATTTTCTCATTTACTTTCTACTATTGAAGCCATGTTTT TTTTTATATAATTTTATTTCTACTGTTATCTTGTAGGAAGCCAGTGCCATTCCTTTTGCTGCACTGACAGCTTGGCGTGCTCTAAAAAGCACTGCCAGAA TAAGTGAGGGTTTATCATCCAGTAAATATTCAGTGTGCTGAAAACTCTTTTCTTTCTCTCACTTATATCCTTTAGCTTATCTCAACAGACAAAGGATATT AATAGTGGGTGGTGGAGGAGCAGTAGGGTTTGCTGCAATTCAGCTTGCAGTTGCTGCTGGTTGCAATGTTGCAACTACTTGTGGGAGTCAAAGTATTGAT CGAATCCTAGCAGTTGGTGCTGAACAGGCTGTTGATTATGTTGCCGAGG
• Tissue: pods
• Gene name: LI_gene_191165;
• Additional information: details;

Expression of Ll_transcript_307187

FPKM

• PAB: 0.3
• PNAB: 0
• PS1: 0.3
• PS2: 0.4
• PS3: 0.5
• PW1: 0.2
• PW2: 0
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_307187

• Blastp: Reticulon-4-interacting protein 1 homolog, mitochondrial from Dictyostelium with 36.59% of identity
• Blastx: Reticulon-4-interacting protein 1 homolog, mitochondrial from Dictyostelium with 36.59% of identity
• Eggnog: alcohol dehydrogenase(COG0604)
• Kegg: Link to kegg annotations (DDB_G0288729)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443914.1)
• Pfam: Alcohol dehydrogenase GroES-like domain (PF08240.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;