Id Trinity | TRINITY_DN52238_c7_g1_i5 |
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Name Transcript | Ll_transcript_307191 |
Sequence | TCTCTCTCTCAGCGGACCAAAACACAGACACGTTTCTCTCCTCTCACTCACATGCACACAGCACACTCATCATCGAATTCAAAATCCCTAAATCCATTTC TCTGAATACTCATTTCAATTTCAACCTAATCATCATTATAATTCATTCAATTTCACACGATGCGAATTTTCAGAAAACTCACTACTCCCTCCAATTATCA TCACCATCATCAACTCCGATCCTACGTCTCAACCTGTCGCGCCGTCGTTCTCCCCTCATTCGGCGGCGCCGACAAGCTCCAGCTCCGTTCCGATGTTCCA GTCCCTCCTCTCAAACCTAACCACGTCCTCGTTCGAACACGCGCCGTTTCCATCAACCCCTTAGATACCCGAATGCGGTCGGGGTATGGGCGTTCGATTT TTGAGCCGTTGTTGCCGCTGATTTTAGGGCGGGATGTGAGCGGCGAGGTTGCGGCGGTTGGAGAATCGGTGCGATCGGTGAGTGTGGGTCAAGAAGTTTT TGGTGCATTGCATCCAACTGCAGTGAGGGGAACTTACACTGACTATGCTATTCTATCTGATGAGGAGGTTACTCCAAAACCAACTTCACTTTCACATGTG GAGGGGAACTCCTTGTTCGGGGGAAACCCTGTATCTGTTGACTGTTTGAAGGAGGGAACTCCTTGTTAGGAAGCCAGTGCCATTCCTTTTGCTGCACTGA CAGCTTGGCGTGCTCTAAAAAGCACTGCCAGAATAAGTGAGGGACAAAGGATATTAATAGTGGGTGGTGGAGGAGCAGTAGGGTTTGCTGCAATTCAGCT TGCAGTTGCTGCTGGTTGCAATGTTGCAACTACTTGTGGGAGTCAAAGTATTGATCGAATCCTAGCAGTTGGTGCTGAACAGGCTGTTGATTATGTTGCC GAGGTGGTGATGAATCTTTTTGTATCATATCTGAATTATGAAAGACAATGCTGTTATTGCTTATTGTGTTGATATCAAATTTCATGAAAGGGAAAATGAA CAAAAAATAGCGTACAGGTTTATAGAAAAATAGGAAAACTTAGCATATTGGTTTAAGAAGAGACGATAGCTATCTTTTGATGAATATGGCAAATGACTGT CTGATACTAGGGAAAGCAAATTGTTAGTGGGAAAATAATTAAAATAACTATGTGAATAAGTTAGAAGTGAGGACATGAGGGAGACTAAGTTGATTTATTT CTTTTTAAATGTTTAATTGCATTTATAAAACAGCAAAAACAGATCCCTTATCCTAATTGACTTTCTTGCTAAACCCATAAGGGGAATATGGAGATTAAAA TATGAACCAATAAGGCCTAAATAACTTAAACCCCAACCTCAAATACAATTTAAGACCGAGACATTTGAACTAGTGGAATACCTCTAGGACGACAATAACA ATAAAAACAAAAGCCTTTCCCTACTTAGTATAGTTAGCTACGAGGATTAAACATCTCTCATAAAGCAAGTCTTGAAAAGGCCATTTATATCCAACTCTAG GTCAAAGTCTTTCTTAATGGTTGCACCTAGAGGATTGTCGGTATTAAAATAGTTTAGCAACTTACTGAAACTTACAATCCTATGTTATAATCACTATATG TAGTACAATTAGCTCTAAAATAATAAATAAATAAAAATTCTAAGATAATATGTTCTTTAATCTTATGCTTCATTGATGCTAGTGCATCTTGTATAAGACT TGCTCTGTCTCTAACTTCATTCTTGAGACAGGATGTTGAGTTGGCTATAAGGGGAAAGTTTGATGCTGTTTTGGACACTATTGGTGTGCCAGAGACAGAA CGGATGGGCATTAATTTTCTAAAGCGAGGAGGACACTACATGACCCTTCAGGGTGAGGCAGCATCATTGACTGATAGGTTTGGACTGGCTATTGGACTTC CTACAGCAACAGCGTTTTTATTGAAAAAACAGATTCAATACCGATACTCTCATGGAATAGAATACTCATGGACATTCATGAGGGCTGACATTGAAGGCTT AATTGAGATTCGAAAGCTATGTGAAGCAGGGAAGTTGAAGATACCTGTCGACAAAACATTTCCCATAGCACAAGTAAAAGAGGCTCATGAGGCAAAAGAC AATAAGCTCATTCCTGGTAAAGTAGTGCTGGAACTTGATTGACCAGTTTACTTAAAGTAGAAAATGTTTTTGTTTTGAGATTGTTCCACATTTAAATGAC AAATGGACAGTTTTCCCCCTATGTTTTCACTGTATGATAGAAATGGAACTTTTTGTAAATTGATTCATAATATGCCATCATAAAAATCTATAAATTGGCT TAGAAGTTTGATAACACTGACTTTTATCTTTTTACCCATGCCCACTTGTGAAAGCTGCTTTTATGATAAACCTTTATAACTCCCATGTGTCAATGGCACT GACATTCAGTAGCCAAACCCATCTTCTGTCTAATTGTGACATGTAGCTGAATGCTTTCAAATTGTATTAACTTTTAGTGATACAATTAGAAAGGTAGGCA TCAATTATTCAAATâBLAST |
Tissue | pods |
Gene name | LI_gene_191165; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_307191
Blastp | Reticulon-4-interacting protein 1, mitochondrial from Mus with 31.25% of identity |
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Blastx | Reticulon-4-interacting protein 1, mitochondrial from Mus with 32.34% of identity |
Eggnog | alcohol dehydrogenase(COG0604) |
Kegg | Link to kegg annotations (170728) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443914.1) |
Pfam | Zinc-binding dehydrogenase (PF13602.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |