| Id Trinity | TRINITY_DN52239_c0_g4_i24 |
|---|---|
| Name Transcript | Ll_transcript_306710 |
| Sequence | GAATAGAAGAAGGTCGAGAATCCAAAGTCAAACAAAAACAAAGGATTGCAAAATAACTGAATGTTTCTTTTTTGGCAGGACTAAACCGACGTCGTTTTAT CATTCCTTCTGTTGAATCTTCGTTTCTACGCAAATTCAATTCATTATTTTACCCTAATTTACTATTTTTATTGCAACCCTTTTTCCCATTTCAAAGTAAT TAACACTTTTTCATAGAAGAATGTTGAAGTTTGATTAATTAATGAAGCTTCAATAATACTTCTCTTTTACTCTTCCTTAAACCCTTTTACCTTTCTCTTC ATTTTTCTGTGCCCCTTTATAACACGCTCTCTCTCTTTTCTATTGTTATTTCCTTAATTCTGTTATTTTGAGGTGATTATACTCTCTTTTTTCTTTCTCT TGTAATTTTCATGCTTCTGTTTTTTTATTTATATGTTCAAATTTCATATGCCCATCTGTTTAATTTAATTTTTTTGTCTAGATTCTTGTCAATTTATAAT AAAAGTTTCATCTTTTACTAATTTTGTATTATTTTAATTCATTGTTTTTTTGTGTGTTTTTTTGTGCTTGCATGATGGTTGGGTATTTGCTTATTGTTTT GGACTTGTATGGATTCAAGTAAAGTTTCTCTTTTTGACATGTTATCTGGTTTTCATCATCTTTGTGGTTTCAGACTGTGTAACAGTCAAATTTAAAAATA TGAAATAAATGATAGTTGCTGATGTAGCTTTGAAGAAACTATAACTTTTTTTGTTGTTCTCCAGCTTCTTTGTTTATATGAGTTATATGGAATGGGATCA TGGAACCAGTAAATTCTAGGTTCTGTTTTTAGTAATTTTTTATTTGCTTATTCAGCTATTATCAGAATTTGTTTGCTATTGGTAATTTTCATGACTTCAA TCAATATCAAGTCTTTTTTTATGAATATGATTGCTATGAATAACGAATAAAATCGAAGTTGTTAATTTTAAATTCTAAATGAGTTTTGTTAGTTAGTGAC TTGGTTGTATACTTGACTACTTGTTTATAGCTGTGACTGGACTTTCGTTTACTCCATTTATATTGGCTTCCTTTTTATTCCGGCTTTCAGAATGGATTTA AGATTTTCTGTAGCTTTAATTCGATACGATACTTTGTTTGAATTGTTGTTGCTTTGTTGTTGGTAGAGAAGTTTACCTGTGTCATTGTTTATCATGTTAA GGAAGGAACAAATGACTGGAATAGGAAAGGAGGAAGAGTCAGGTAGTCCTAGTTGGGGTGCGTCGTTTTTTACGCAGACAACCGAGGATGTGGCTAGAGC TGTGGCCGCTGCTATGAATTCTCCAAGGCCATCAGTGATATATTCATCAAAAGATGATCAGAGTAGTAGCCAACTTAAAAGATTGCAAAGCCAAGTTACG AAAATGATTAAAGGCTTTTCACGCACTCCTGAAGTAAAATATACAAATTACAATCCAGAAATACTCACAAGTCAGAAGCGTCAATGGGCTGCTAATTTTC AGTTGCAGAACATGGACCATAAATCTTGGAAGGAACCAAAACAGCTGTTTGAGAGCATAGTGGTCGTTGGTCTTCATCCTTGCTGTGATATTCAGGCACT GCAAAGGCAATATATTATCCGAAAGTCTGAAGGATCTGGTAAATTGAGAAGTGCGCTTGGGTATCAGAATCCATCTCGTATTGAATCCAATATTGAACCT CAGGTCTTATTTGTTTACCCTCCAGAAAAACGTCTACCTATTAAAGACAAGGATCTTATGTCTTTCTGCTTCCCAGGAGGCTTGGAGGTTCGTGCTGTGG AGAGAACCCCTTCCATGAGCGAGTTGAATGAAATTGTTTTTGGGCAGGAACACCTTAAACAAAGAGATATGTCATTTGTATTCAGGTTACAGGGTGCTGA CAATTCTGTACTTTATGGATGTTGTGTCTTAGCTGAAGAACTAGTGCACAGACCCTCTGGGTTGCTCTCTCTGATTTCTGATAAGCAGCCATCTTACTCT TCTTTGAGGCGCCAAATATTTACCACACTGAGATGTTACTGCATTCTTTCGAGGCTTCCATTTTTTGAATTGCACTTTAGTGTACTAAATAGGTAGGTAT TTATTATCCAGAGTCATCTGATGGGAAGTGAGATATAGAAGCATCTTCACACAAGAAAGGCTAGAGCGGTTGACAAAAGGTGCTGGAGATTTAAATTTAG AATTTTTTGAAGGTAACTATGAGGGAGAAAATTCAGAAGACAATTTCGAGAGTAAGTTGTTTAGTGATAGACCAGTAGAAGACAGGTTGGATAAAAATCC AAGAGTTTCTCAATCAATCTTAGGAAGTTCCACCACGGAAAACGTTGTGGATGATGCTCACCAAGAGCACCAAATGGTTAATGGGGAGCTTCAGACATAT AAAGAGAAAATTATTTATGACATTGTTGTTCCTACCGATCCTGAAACTGATAAGGCAATGGCCGAAGAAGAATCTGGCCCTACAAATTCTGAGGATATTG ATCAGTATGGAGGTGCTTTTGCAACCTATAAAATATCAGAAGATAGACATTTACCCAATGCTATTTTCCCCCTCCTGCGCTATTGCCAGTATGAAAGCTC CGATTCTTCCTGCAGTTTCCAAGGCTCTCCTTGTGAAGATGGAAATTTTAGGAGTGATGTTGATGATAATGAGACAGAAGATGCATCTTTCTCTGGCCAA GAGGATTTAAATGACTTACATGATATTCTTAACTGGGCTAAGGAAAATAACCATGGACAACTACAGATTATAAGCGAGTATTACCATTTAAATTGCCCTG CTAGAGGCTCAACCCTTACATTTCATCCTTTGGACCACCTGCATCCCTTGGAATATCATAGATTAGCCGAGACAGTACTATGTCTTGGGGGTTCAACAGT TGATTTGAAATCTTTCAGTACCAGTCTGGAAATAGCCAATGCACATAACGCTCTTCTGGCAGAAGAGGCAACTGCGTTATCTATATGGGCTGTGGCATGC ATATGTGGCACCTTGAGACTTGAAAATGTGTTAACATTCTTTGCAGGAGTTTTGTTAGAGAGGCAGATCGTTGTTGTATGTTCTAATTTGGGAATCCTAT CTGCTTTAGTTTTATCAGTTATTCCGCTAATCAGGCCTTACCAATGGCAAAGCCTGCTGATGCCGGTTTTACCAAATGACATGCTTGAGTTTTTGGATGC ACCTGTCCCATACATAGTTGGTATCAGGAACAAGACAAATGAGGTTCAATCAAAGTTAACTAATGCTGTTCTGGTTGATCTCAATAGAAACCAGGTGAAG TCACCAACAATACCACCACTACCGAGACACAAAGAGCTAATCTCTTCTTTGCGTCCTTATCATACAACTCTCGTTGGAGAAAGTTACCTGGGTAGGAGAA GACCAGTGTATGATTGCACAGAAGTGCAGGTCAAAGCTGCCAAAGGGTTCTTATCGGTATTAAGATCTTACTTGGACTCCCTTTGCTGTAACTTCCGTTC TCATACAATAACCAATGTAGAATCCAATGACGACAAGGTTTCCTTGCTTTTGAAGGAGAGTTTCATCGATTCATTTCCTTATCGCGATCGGCATTTCATG AAGCATTTGGTGGATACACAGTTATTCACTGTGCATACTGATATTGTGCTCTCTTTTTTCCAAAAGGAATGAGTTTCAAATTTTAAATAATTTTTTTTGG GAATATTGCAATCTAGCAAAGCTGGAACAAAAGTTCGATATTGTATAAAAAAGGTCGGTCCAATGCGCAATGTTCCCACTTAGTGGAGTCTGGAGAGAGC AGATGTATACAACTCTACTTTGTAAGTGGGTAGGCTATTTCCGGGATTCGGACATGTGATTTCATGTCAGTATTGTATAATTTCCTTAAATTATTTATGT GCAAAACTTTTGTCCCTTTGGCATGTAACTTGTTCCATGAACCCACCATTTTTGTTTAACCTTTCTGCTGAAGGACCACAAGTAAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_191178; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_306710
| Blastp | DENN domain-containing protein 5B from Danio with 35.29% of identity |
|---|---|
| Blastx | DENN domain-containing protein 5B from Danio with 35.29% of identity |
| Eggnog | DENN MADD domain containing(ENOG410XNYP) |
| Kegg | Link to kegg annotations (323528) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463897.1) |
| Pfam | DENN (AEX-3) domain (PF02141.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |