Id Trinity | TRINITY_DN52239_c0_g4_i25 |
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Name Transcript | Ll_transcript_306711 |
Sequence | GAGGAGTTTAGTTTAGTTTAGTTTAATTAAGCTTAAATAATAACACCCCTCTATCCCTGTGCTATAGCCAAAAGTTTTTTTGCCTCAACTATCTATCATT CTTTACTTTTCTGTTTTCTCTCATTCCCTTTATTTTCATACAAGCTCAGGTTACTTTCTCTTTTTCTTTTTTTTACATATGAATTTCACTGCATCCAATT TCAGCTGTTTGTATGCTCAATTCAATTTCTATTTTTACCTGTTTAATTTATTTTATTTATAATCAGAACAATCAAAGTTTCTTTCTTTTTTGGGGTGTTT GGATGGTGGTTGTTGGGGTACTACTACTTACTATGATCTGCTTTAATTCAATTGAAATATTCTTTTTCTCTATTTGGGTTGTGTTTCATTCAATTGGTGC ATGATTTTATCTGGCTCTGTTTTTTCAGCAACAGTAACAGACAAAGCAGAAAGAACATGAAACAAAACATACTGATGCATCTTTTGAAGAATTGTAGTGT AAAATGGGATAGTATTTTTTCTTGAGCAAAAAAGGATGAACTTATTTTCTGCACACTTAAGCTTCTTTGTTGTGTGAAAGCTGTTACTGATTTTCTGTTT ATATCTTTGGATCAGAAACATGGGGAAATGGGAAATGAGTGTTATTTGTTCAATATTCAGTGACTGTGTTTATTTACTAATGCTAGTGAGAAAATGGATT GTTAATAGCACTTCAAATCAGTTTAATACCAGGTTTTTAATGATAGATTGATATGAAAAACAAGCATATTAGAAGTTCTACCGTAAAATGGCATTGGCAA ATTATAATTACTGCTTGAGAGTTTCAAATTTTGTTTGCTTATCAGTATACTTGTCTGTGGCCGTAATTATGCTCCATGTTTCATTATTCACAATTATTAA GAAAGGATATGAGATTTAATGTAGTTTTATTTCTGTCTGTTCTTTTATTTGAATAATTGTTACATATATGAAATTGTTATTTATCCGAGTCGTAATTTAC AATGTTTAGGTAAGAACAAATGGCTGAAGATGATAAGGAGAAAGGTTCAGGTAGTCCAAGTTGGGGTGCTTTATTATTTAAGCAGACAACCGAGGATGTA GCTAGAGCAGTTGCTGCTAATTCTCCAAACCCATCTGTGATAAATTCATCCAAAGATGATAATGGTGGTAGCCAATTTCAAAGACTGCAGAATCAAGTTA CGAAAATGATAAAAGGTCTTTCACGCCCTACAGATGTTAATACAAATTACAATCCTGAAATTTTGACCAGTTTGAAGCGTCAATGGGCTGCAAACTTTCA GTTGCAGCACACGGACCATAAGTCCTGGAAGGAGCCCTCGCGGTTGTTTGAGAGCATGGTGGTTGTTGGACTTCATCCTAATTGTGATGTTCATGCACTG CAAAGGCAACATGTTGACAGAAAGTTTGAAGGCTCGGGCAAATTTAGAAGTGCACTTGGCTATCAGAATCAATCCCGTATAGAACCCAATATCAATATTG AACCTCAGGTCTTATTTGTTTACCCTCCAGAAAAACGGTTGCCTCTCAAATACAAGGATCTTCTTTCTTTCTGCTTCCCAGGAGGCTTGGAGGTTCGTGC TGTGGAGAGAACCCCTTCCATGAGCGAGTTGAATGAAATTGTTTTTGGGCAGGAACACCTTAAACAAAGAGATATGTCATTTGTATTCAGGTTACAGGGT GCTGACAATTCTGTACTTTATGGATGTTGTGTCTTAGCTGAAGAACTAGTGCACAGACCCTCTGGGTTGCTCTCTCTGATTTCTGATAAGCAGCCATCTT ACTCTTCTTTGAGGCGCCAAATATTTACCACACTGAGATGTTACTGCATTCTTTCGAGGCTTCCATTTTTTGAATTGCACTTTAGTGTACTAAATAGCAT CTTCACACAAGAAAGGCTAGAGCGGTTGACAAAAGGTGCTGGAGATTTAAATTTAGAATTTTTTGAAGGTAACTATGAGGGAGAAAATTCAGAAGACAAT TTCGAGAGTAAGTTGTTTAGTGATAGACCAGTAGAAGACAGGTTGGATAAAAATCCAAGAGTTTCTCAATCAATCTTAGGAAGTTCCACCACGGAAAACG TTGTGGATGATGCTCACCAAGAGCACCAAATGGTTAATGGGGAGCTTCAGACATATAAAGAGAAAATTATTTATGACATTGTTGTTCCTACCGATCCTGA AACTGATAAGGCAATGGCCGAAGAAGAATCTGGCCCTACAAATTCTGAGGATATTGATCAGTATGGAGGTGCTTTTGCAACCTATAAAATATCAGAAGAT AGACATTTACCCAATGCTATTTTCCCCCTCCTGCGCTATTGCCAGTATGAAAGCTCCGATTCTTCCTGCAGTTTCCAAGGCTCTCCTTGTGAAGATGGAA ATTTTAGGAGTGATGTTGATGATAATGAGACAGAAGATGCATCTTTCTCTGGCCAAGAGGATTTAAATGACTTACATGATATTCTTAACTGGGCTAAGGA AAATAACCATGGACAACTACAGATTATAAGCGAGTATTACCATTTAAATTGCCCTGCTAGAGGCTCAACCCTTACATTTCATCCTTTGGACCACCTGCAT CCCTTGGAATATCATAGATTAGCCGAGACAGTACTATGTCTTGGGGGTTCAACAGTTGATTTGAAATCTTTCAGTACCAGTCTGGAAATAGCCAATGCAC ATAACGCTCTTCTGGCAGAAGAGGCAACTGCGTTATCTATATGGGCTGTGGCATGCATATGTGGCACCTTGAGACTTGAAAATGTGTTAACATTCTTTGC AGGAGTTTTGTTAGAGAGGCAGATCGTTGTTGTATGTTCTAATTTGGGAATCCTATCTGCTTTAGTTTTATCAGTTATTCCGCTAATCAGGCCTTACCAA TGGCAAAGCCTGCTGATGCCGGTTTTACCAAATGACATGCTCGAGTTTTTGGATGCACCTGTCCCTTTCGTAGTTGGTATCAAGAACAAGAACAGTGAAG TTCAGTTGAAGTTAGCCAATGTTATTCTGGTTGATGCCAATAGAAACCAGGTGAAGTCACCAACAATACCACAACTTCCAAGACAAAAAGAACTAGTCTC CTCTTTACGTTCTTATCATGCAACACTTGTAGGGGAAAATTACTTGGGTAGAACAAGGCCAGTGTATGAATGCACTGAAGTGCAGATTGAAGCTGCAAAG GGGTTCCTTTCAGTGTTAAGATCATACTTGGATTCTCTTTGCTGTAATATCCGTTCTCACACAATTACCAATGTACAATCCAACGATGACAAGGTATCCT TGCTTTTAAAGGAGAGTTTCATCGACTCGTTCCCTTACCGTGATCGATCTTTTATGAAGGTTTGTTTCTTAAGCTTACTTCATTCTTTATGCTTACTATG GGATCAAAATTTTCTCCTATTTGCTTGTAAGTTTTAAATGATCATAATCTA BLAST |
Tissue | pods |
Gene name | LI_gene_191178; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_306711
Blastp | DENN domain-containing protein 5B from Danio with 34.45% of identity |
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Blastx | DENN domain-containing protein 5B from Danio with 34.45% of identity |
Eggnog | DENN MADD domain containing(ENOG410XNYP) |
Kegg | Link to kegg annotations (323528) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463897.1) |
Pfam | uDENN domain (PF03456.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |