Id Trinity | TRINITY_DN52239_c0_g4_i26 |
---|---|
Name Transcript | Ll_transcript_306712 |
Sequence | GAATAGAAGAAGGTCGAGAATCCAAAGTCAAACAAAAACAAAGGATTGCAAAATAACTGAATGTTTCTTTTTTGGCAGGACTAAACCGACGTCGTTTTAT CATTCCTTCTGTTGAATCTTCGTTTCTACGCAAATTCAATTCATTATTTTACCCTAATTTACTATTTTTATTGCAACCCTTTTTCCCATTTCAAAGTAAT TAACACTTTTTCATAGAAGAATGTTGAAGTTTGATTAATTAATGAAGCTTCAATAATACTTCTCTTTTACTCTTCCTTAAACCCTTTTACCTTTCTCTTC ATTTTTCTGTGCCCCTTTATAACACGCTCTCTCTCTTTTCTATTGTTATTTCCTTAATTCTGTTATTTTGAGGTGATTATACTCTCTTTTTTCTTTCTCT TGTAATTTTCATGCTTCTGTTTTTTTATTTATATGTTCAAATTTCATATGCCCATCTGTTTAATTTAATTTTTTTGTCTAGATTCTTGTCAATTTATAAT AAAAGTTTCATCTTTTACTAATTTTGTATTATTTTAATTCATTGTTTTTTTGTGTGTTTTTTTGTGCTTGCATGATGGTTGGGTATTTGCTTATTGTTTT GGACTTGTATGGATTCAAGTAAAGTTTCTCTTTTTGACATGTTATCTGGTTTTCATCATCTTTGTGGTTTCAGACTGTGTAACAGTCAAATTTAAAAATA TGAAATAAATGATAGTTGCTGATGTAGCTTTGAAGAAACTATAACTTTTTTTGTTGTTCTCCAGCTTCTTTGTTTATATGAGTTATATGGAATGGGATCA TGGAACCAGTAAATTCTAGGTTCTGTTTTTAGTAATTTTTTATTTGCTTATTCAGCTATTATCAGAATTTGTTTGCTATTGGTAATTTTCATGACTTCAA TCAATATCAAGTCTTTTTTTATGAATATGATTGCTATGAATAACGAATAAAATCGAAGTTGTTAATTTTAAATTCTAAATGAGTTTTGTTAGTTAGTGAC TTGGTTGTATACTTGACTACTTGTTTATAGCTGTGACTGGACTTTCGTTTACTCCATTTATATTGGCTTCCTTTTTATTCCGGCTTTCAGAATGGATTTA AGATTTTCTGTAGCTTTAATTCGATACGATACTTTGTTTGAATTGTTGTTGCTTTGTTGTTGGTAGAGAAGTTTACCTGTGTCATTGTTTATCATGTTAA GGAAGGAACAAATGACTGGAATAGGAAAGGAGGAAGAGTCAGGTAGTCCTAGTTGGGGTGCGTCGTTTTTTACGCAGACAACCGAGGATGTGGCTAGAGC TGTGGCCGCTGCTATGAATTCTCCAAGGCCATCAGTGATATATTCATCAAAAGATGATCAGAGTAGTAGCCAACTTAAAAGATTGCAAAGCCAAGTTACG AAAATGATTAAAGGCTTTTCACGCACTCCTGAAGTAAAATATACAAATTACAATCCAGAAATACTCACAAGTCAGAAGCGTCAATGGGCTGCTAATTTTC AGTTGCAGAACATGGACCATAAATCTTGGAAGGAACCAAAACAGCTGTTTGAGAGCATAGTGGTCGTTGGTCTTCATCCTTGCTGTGATATTCAGGCACT GCAAAGGCAATATATTATCCGAAAGTCTGAAGGATCTGGTAAATTGAGAAGTGCGCTTGGGTATCAGAATCCATCTCGTATTGAATCCAATATTGAACCT CAGGTCTTATTTGTTTACCCTCCAGAAAAACGTCTACCTATTAAAGACAAGGATCTTATGTCTTTCTGCTTCCCAGGAGGCTTGGAGGTTCGTGCTGTGG AGAGAACCCCTTCCATGAGCGAGTTGAATGAAATTGTTTTTGGGCAGGAACACCTTAAACAAAGAGATATGTCATTTGTATTCAGGTTACAGGGTGCTGA CAATTCTGTACTTTATGGATGTTGTGTCTTAGCTGAAGAACTAGTGCACAGACCCTCTGGGTTGCTCTCTCTGATTTCTGATAAGCAGCCATCTTACTCT TCTTTGAGGCGCCAAATATTTACCACACTGAGATGTTACTGCATTCTTTCGAGGCTTCCATTTTTTGAATTGCACTTTAGTGTACTAAATAGCATCTTCA CACAAGAAAGGCTAGAGCGGTTGACAAAAGGTGCTGGAGATTTAAATTTAGAATTTTTTGAAGGTAACTATGAGGGAGAAAATTCAGAAGACAATTTCGA GAGTAAGTTGTTTAGTGATAGACCAGTAGAAGACAGGTTGGATAAAAATCCAAGAGTTTCTCAATCAATCTTAGGAAGTTCCACCACGGAAAACGTTGTG GATGATGCTCACCAAGAGCACCAAATGGTTAATGGGGAGCTTCAGACATATAAAGAGAAAATTATTTATGACATTGTTGTTCCTACCGATCCTGAAACTG ATAAGGCAATGGCCGAAGAAGAATCTGGCCCTACAAATTCTGAGGATATTGATCAGTATGGAGGTGCTTTTGCAACCTATAAAATATCAGAAGATAGACA TTTACCCAATGCTATTTTCCCCCTCCTGCGCTATTGCCAGTATGAAAGCTCCGATTCTTCCTGCAGTTTCCAAGGCTCTCCTTGTGAAGATGGAAATTTT AGGAGTGATGTTGATGATAATGAGACAGAAGATGCATCTTTCTCTGGCCAAGAGGATTTAAATGACTTACATGATATTCTTAACTGGGCTAAGGAAAATA ACCATGGACAACTACAGATTATAAGCGAGTATTACCATTTAAATTGCCCTGCTAGAGGCTCAACCCTTACATTTCATCCTTTGGACCACCTGCATCCCTT GGAATATCATAGATTAGCCGAGACAGTACTATGTCTTGGGGGTTCAACAGTTGATTTGAAATCTTTCAGTACCAGTCTGGAAATAGCCAATGCACATAAC GCTCTTCTGGCAGAAGAGGCAACTGCGTTATCTATATGGGCTGTGGCATGCATATGTGGCACCTTGAGACTTGAAAATGTGTTAACATTCTTTGCAGGAG TTTTGTTAGAGAGGCAGATCGTTGTTGTATGTTCTAATTTGGGAATCCTATCTGCTTTAGTTTTATCAGTTATTCCGCTAATCAGGCCTTACCAATGGCA AAGCCTGCTGATGCCGGTTTTACCAAATGACATGCTCGAGTTTTTGGATGCACCTGTCCCTTTCGTAGTTGGTATCAAGAACAAGAACAGTGAAGTTCAG TTGAAGTTAGCCAATGTTATTCTGGTTGATGCCAATAGAAACCAGGTGAAGTCACCAACAATACCACAACTTCCAAGACAAAAAGAACTAGTCTCCTCTT TACGTTCTTATCATGCAACACTTGTAGGGGAAAATTACTTGGGTAGAACAAGGCCAGTGTATGAATGCACTGAAGTGCAGATTGAAGCTGCAAAGGGGTT CCTTTCAGTGTTAAGATCATACTTGGATTCTCTTTGCTGTAATATCCGTTCTCACACAATTACCAATGTACAATCCAACGATGACAAGGTATCCTTGCTT TTAAAGGAGAGTTTCATCGACTCGTTCCCTTACCGTGATCGATCTTTTATGAAGCTTTTCGTGGATACACAGCTCTTTTCTGTACACACCGATCTTATTC TCTCTTTCTTCCAAAAGGAATAGTGCTGCCATGCAACACTTTCTGGGAATATTGTGGCCCTGTTTCAACTTGAACTCTAGTTCAGTGTTGTATAATTTTC CCATACCGGGAAGAAATTTTTTCCTCGACATGTTTATCCGAGTTGCGCCCGGCCCTTCTTCTCCTTGAGGCTTTCTGCAGCACCTGTAAACAATAAGTTC AATGATATATAGCTTAGTATAGGGTTTCATATAAAATGTAAATATTGCAAACCTTATTTATGCTCTTAAGATTGTATTAGAAAAATGCTACCTATTATTA TTATTGGAAGCAGGATTTGGATCAATGGCATCATGGTCCTGATTCGATGATCAATAGTTTGTTCAAATGATTTAATTGAATGCAGCTTGCTTATGTAAGT TGATTCCAGATAAATCTTGTGTTTGTGGGTTGAAACTGATCAAAAAATCATAGCAAGCATGAATCTATGTATGTTTTTTAAGGGATTCAATAGCTTGTGT TGATGTTTGTATCATTATTGTATACATACATGATGTGTAAAGAGTCATCAGCTGGTTTAAGGAATGAA BLAST |
Tissue | pods |
Gene name | LI_gene_191178; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_306712
Blastp | DENN domain-containing protein 5B from Danio with 34.45% of identity |
---|---|
Blastx | DENN domain-containing protein 5B from Danio with 34.45% of identity |
Eggnog | DENN MADD domain containing(ENOG410XNYP) |
Kegg | Link to kegg annotations (323528) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463897.1) |
Pfam | uDENN domain (PF03456.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |