Id Trinity | TRINITY_DN52242_c0_g3_i14 |
---|---|
Name Transcript | Ll_transcript_306145 |
Sequence | CATAAGTGAAAATCATGACATGTTTCATTTTTTATAAAAAAAAACATTTCTAAAACAAAAAAATAATACACATATCATACATTACCGGTAGATACATCAA CCAATAAAATGTGTTACATGGAGAAACTTTGGAAAATAGATGTTTTCCCCAAAGCCATAGTCACTCATACTTTCTCTTTTTATCATCTTTCACTCACACT TTGTCTCCCTTCATTTTCAGTATTATTCAATATGATACATTGCATTTGTATCAAAAGTCACAACTTTTATTTCTTTTATTGTTAGCTTTTCTGGGCTTCT TTTCTTTCAAATCCTTTTCACTACTCCCATTTTTTTCCTCCTTTCATTTTTAGTACTAGATTTCAATTTTCTACAAGTTTGTTTCTTTACTATGGCAAAG GACATTTCTTTGAGCCCTTTTGAGTTTTGAGTTTGACTCTCATTATCCTCTTTCAACCTTTCCTTTTGACCTCACAGTGTGAAAGTTCCTATTTTTCTGC TTAATTATCTCACCCTTTTTCATTTTGATGATTTTGTTTTGTGTACTCCAAGAGGGTTTTAAAGCTTGGTCTTCAACTACTTGTGACCTATTATAAGCTT ATCTTACTTCATTTTAACTAGATGAGGGTAACAAAGTTGCCATTTTGGTTTTATAGATTAGAAGTAGAAGGGCTTTTTATTTGCATAAATTGTCTTATAA ATCAAATTTATGTGTAATGGCTTGCTGGTTTTACCATGAATGTGTGTAGTTATAGCACTTCTTATCATTAGCACATGGTTTGGTAACAGCCAAGATTAAT TGATTAAGCATAGTTATATTTTTGCTAATTTTAGTTGTTTGTGAAGTTGAAGCATCATTAGTCCTGGTTAAGAAACTATGGAAGAGACATTTGTTCCATT TCGCGGAATAAAAAATGATGTTCAACAAAGATTGATGTATTACAAGCAAGATTGGATTGGTGGTCTCACAGCAGGCTTCAGGATATTAGCCCCAACCACA TATATATTTTTTGCATCAGCAATTCCAGTTATTTCATTTGGGGAACAATTGGAGAGAGATACAGATGGAGTACTCACTGCAGTTCAAACATTAGCATCTA CTGCATTGTGTGGAATTATACACTCTATTATAGGAGGCCAGCCTTTGTTGATTCTCGGAGTAGCAGAACCAACTGTTATTATGTATACATTCATGTTCAA CTTTGCTAAAAGTAGACCAGAGTTGGGTTCAAAGCTCTTTCTAGCGTGGTCCGGATGGGTATGCATGTGGACAGCTATCTTGTTGTTCCTGCTGGCTATC TTAGGAGCTTGCTCCATCATCAACAGGTTCACTCGCCTAGTAGGGGAACTATTCGGCCTTCTTATTGCAATGCTCTTCATGCAAGAGGCTATTAAAGGAT TGGTTAATGAGTTTCATATACCCGAGAGAGCAGACCCAACATCAACTGAGTTTCAATCTTCATGGAGATTCGGAAATGGCATGTTTGCTTTGATTCTATC CTTTGGGCTTCTACTTACAGCACTGAAAAGCCGAAAAGCAAGGTCTTGGCGATATGGTTCAGGTTGGTTACGGGGCTTCATAGCAGATTATGGTGTCCCA TTGATGATTATAGTATGGACTTCTTTTTCTTATATACCAGCTGGAAGTATTCCAAAAGGAATTCCTAGGCGACTCTTCAGTCCAAATCCATGGTCTCCTG GTGCATATGAAAGCTGGACTGTCATAAAGGACATGCTGGATGTGCCAATCCACTACATTTTCGGTGCATTTATTCCGGCGACAATGATTGCCGTGCTCTA TTATTTTGACCATAGTGTGGCATCTCAGCTTGCTCAGCAGAAAGAGTTCAATTTAAGAAAGCCACCTTCTTTCCACTATGATTTACTTCTTTTGGGATTC ATGGTTATATTATGTGGTCTAATTGGAGTTCCTCCGTCAAATGGTGTCATTCCGCAATCTCCAATGCACACCAAAAGTTTAGCTACATTAAAGCACCTGT TACTTAGAAACCGGCTTGTTGCAACAGCTCGACGTTGTATGAAAAACCAAGCAAGCTTGGGACAAGTATATGGAAGCATGAAAGAAGCTTACTGGCAAAT GCAAAGCCCTTTAGTTCACCAAGAACCTTCCTCCCAGGGACTGAATGAGTTGAAAGAGTCAACTATTCAATTGGCATCAAGCATGGGGACTATAAATGCT CCGGTTGATGAGTCAATATTTGATGTCGAGAAGGAAATTGATGACCTATTGCCTGTCGAGGTTAAAGAACAAAGAGTGAGCAACTTGCTCCAATCTTTGA TGGTCGGAGGATGTGTAGCAGCAATGCCTTTCCTGAAAATGATTCCTACTTCTGTACTCTGGGGCTATTTCGCTTTCATGGCCATTGAAAACTTACCCGG CAACCAATTCTGGGAACGGATTTTATTAATGTTCACGTCTCCAAGCAGAAGATACAAAGTTTTGGAGGAGTGCCATGCAAGTTATGTGGAATCTGTACCT TTCAAGACAATTGCAGTATTTACACTCTTCCAGACTGCTTACTTGCTTGTTTGTTTCGGTATCACTTGGGTTCCAATTGCTGGGGTTCTATTCCCATTGA TGATCATGCTTCTGGTTCCCGTAAGACAATACATTCTGCCCAAGTTTTTCAAAGGGGTACACCTTCAGGATTTAGATGCTGCAGAATATGAAGTACCTGC ATTACCATTCGATCTAGCTACCGTAAGTCTCAAATACTAGTGAGTAGTGACATTTTCACCTTTTTATCTAGTTACATGCTAGGTGTTTTGTCCGTTGAAA AAAAATCGATGAACACGCGCGAGTGCTACTACCTATAAGGGTGTACCTCTATGTCCTGGAATTGCATGAAAACGATACCTGTACGAGTAGTTTGCAAGTA GTTGCATAGATTAATTCGTGCAATTCCATGACTTGCTTCCTATCCATTTGTTTAATGATTAATGTTGCTTATGAATGTGCATGCAAAGTTTTTTTCTTCT TTCTTTTGGCGTAACTATTTTGAGGTCAATCAACTCGATCCACAGCTTACTTAAGCTTTTGTTTTTCGTCCC BLAST |
Tissue | pods |
Gene name | LI_gene_191204; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_306145
Blastp | Boron transporter 1 from Arabidopsis with 81.79% of identity |
---|---|
Blastx | Boron transporter 1 from Arabidopsis with 81.79% of identity |
Eggnog | solute carrier family 4(ENOG410XPHD) |
Kegg | Link to kegg annotations (AT2G47160) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019418827.1) |
Pfam | HCO3- transporter family (PF00955.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |