| Id Trinity | TRINITY_DN52242_c0_g3_i7 |
|---|---|
| Name Transcript | Ll_transcript_306135 |
| Sequence | CATAAGTGAAAATCATGACATGTTTCATTTTTTATAAAAAAAAACATTTCTAAAACAAAAAAATAATACACATATCATACATTACCGGTAGATACATCAA CCAATAAAATGTGTTACATGGAGAAACTTTGGAAAATAGATGTTTTCCCCAAAGCCATAGTCACTCATACTTTCTCTTTTTATCATCTTTCACTCACACT TTGTCTCCCTTCATTTTCAGTATTATTCAATATGATACATTGCATTTGTATCAAAAGTCACAACTTTTATTTCTTTTATTGTTAGCTTTTCTGGGCTTCT TTTCTTTCAAATCCTTTTCACTACTCCCATTTTTTTCCTCCTTTCATTTTTAGTACTAGATTTCAATTTTCTACAAGTTTGTTTCTTTACTATGGCAAAG GACATTTCTTTGAGCCCTTTTGAGTTTTGAGTTTGACTCTCATTATCCTCTTTCAACCTTTCCTTTTGACCTCACAGTGTGAAAGTTCCTATTTTTCTGC TTAATTATCTCACCCTTTTTCATTTTGATGATTTTGTTTTGTGTACTCCAAGAGGGTTTTAAAGCTTGGTCTTCAACTACTTGTGACCTATTATAAGCTT ATCTTACTTCATTTTAACTAGATGAGGGTAACAAAGTTGCCATTTTGGTTTTATAGATTAGAAGTAGAAGGGCTTTTTATTTGCATAAATTGTCTTATAA ATCAAATTTATGTGTAATGGCTTGCTGGTTTTACCATGAATGTGTGTAGTTATAGCACTTCTTATCATTAGCACATGGTTTGGTAACAGCCAAGATTAAT TGATTAAGCATAGTTATATTTTTGCTAATTTTAGTTGTTTGTGAAGTTGAAGCATCATTAGTCCTGGTTAAGAAACTATGGAAGAGACATTTGTTCCATT TCGCGGAATAAAAAATGATGTTCAACAAAGATTGATGTATTACAAGCAAGATTGGATTGGTGGTCTCACAGCAGGCTTCAGGATATTAGCCCCAACCACA TATATATTTTTTGCATCAGCAATTCCAGTTATTTCATTTGGGGAACAATTGGAGAGAGATACAGATGGAGTACTCACTGCAGTTCAAACATTAGCATCTA CTGCATTGTGTGGAATTATACACTCTATTATAGGAGGCCAGCCTTTGTTGATTCTCGGAGTAGCAGAACCAACTGTTATTATGTATACATTCATGTTCAA CTTTGCTAAAAGTAGACCAGAGTTGGGTTCAAAGCTCTTTCTAGCGTGGTCCGGATGGGTATGCATGTGGACAGCTATCTTGTTGTTCCTGCTGGCTATC TTAGGAGCTTGCTCCATCATCAACAGGTTCACTCGCCTAGTAGGGGAACTATTCGGCCTTCTTATTGCAATGCTCTTCATGCAAGAGGCTGTTAAAGTAG GATGCATCTTTTTTTGTTCGCACTGTAATATTGACTTAATGATTGTGGTTCTTGTATGAAGTAATAAAAGAAATAAGGTAATTTATGTTTTAACCTTGAA TGGTGATTAAAGATGCTCTATAAATGGCTTTAACAGGGATTGGTTAATGAGTTTCATATACCCGAGAGAGCAGACCCAACATCAACTGAGTTTCAATCTT CATGGAGATTCGGAAATGGCATGTTTGCTTTGATTCTATCCTTTGGGCTTCTACTTACAGCACTGAAAAGCCGAAAAGCAAGGTCTTGGCGATATGGTTC AGGTTGGTTACGGGGCTTCATAGCAGATTATGGTGTCCCATTGATGATTATAGTATGGACTTCTTTTTCTTATATACCAGCTGGAAGTATTCCAAAAGGA ATTCCTAGGCGACTCTTCAGTCCAAATCCATGGTCTCCTGGTGCATATGAAAGCTGGACTGTCATAAAGGACATGCTGGATGTGCCAATCCACTACATTT TCGGTGCATTTATTCCGGCGACAATGATTGCCGTGCTCTATTATTTTGACCATAGTGTGGCATCTCAGCTTGCTCAGCAGAAAGAGTTCAATTTAAGAAA GCCACCTTCTTTCCACTATGATTTACTTCTTTTGGGATTCATGGTTATATTATGTGGTCTAATTGGAGTTCCTCCGTCAAATGGTGTCATTCCGCAATCT CCAATGCACACCAAAAGTTTAGCTACATTAAAGCACCTGTTACTTAGAAACCGGCTTGTTGCAACAGCTCGACGTTGTATGAAAAACCAAGCAAGCTTGG GACAAGTATATGGAAGCATGAAAGAAGCTTACTGGCAAATGCAAAGCCCTTTAGTTCACCAAGAACCTTCCTCCCAGGGACTGAATGAGTTGAAAGAGTC AACTATTCAATTGGCATCAAGCATGGGGACTATAAATGCTCCGGTTGATGAGTCAATATTTGATGTCGAGAAGGAAATTGATGACCTATTGCCTGTCGAG GTTAAAGAACAAAGAGTGAGCAACTTGCTCCAATCTTTGATGGTCGGAGGATGTGTAGCAGCAATGCCTTTCCTGAAAATGATTCCTACTTCTGTACTCT GGGGCTATTTCGCTTTCATGGCCATTGAAAACTTACCCGGCAACCAATTCTGGGAACGGATTTTATTAATGTTCACGTCTCCAAGCAGAAGATACAAAGT TTTGGAGGAGTGCCATGCAAGTTATGTGGAATCTGTACCTTTCAAGACAATTGCAGTATTTACACTCTTCCAGACTGCTTACTTGCTTGTTTGTTTCGGT ATCACTTGGGTTCCAATTGCTGGGGTTCTATTCCCATTGATGATCATGCTTCTGGTTCCCGTAAGACAATACATTCTGCCCAAGTTTTTCAAAGGGGTAC ACCTTCAGGATTTAGATGCTGCAGAATATGAAGTACCTGCATTACCATTCGATCTAGCTACCGAGAGGAACTTGGGTAAGACAGCTTCCTTTACAGATGG AGAGATTCTAGATGGAATGATTACAAGAAGCCGAGGCGAGGTCAGACATGTTTGCAGTCCAAAGGTGGTGAACTCCACTGAAACACCATCCATCGAGCTC GCTATTCTTCAAAGTCCAAGGCTCCCGGATAAATTACACAGCCCCCGGCTAAGGCAAACTCAGAAGAAATCACAGCCCTCAAGCTGATGGGAGAGGACCA TTTATCTTGGAGAGGCAAGATCATCCAATTTGAGAAAAGGTGGTTGAACACTGATATTAATACATATGTATTTTCTATTGGTATTGTTAGGCTTATTTAC AAGAATTGCCAGCAAGGGTGGTTTGCTCCTACTTATTTTAACATCTCATTGTTGAAGGGAAAATGCTACAATAGATTATTTAGTGCTAGGAAGTTGTAAC AAGAGTTCACTCTGGTATTTTCCTTTTTTTGTTGTTTTTAATTGTGAGATGAGAATGATCAAAGTCTATGATTGGTTAGTTTGATGCAATTGTGGAACCA TTAACTTGTTACTTTATCAACTTTTTCTTGGACAAATGTCTCAAGAAATCTTATATGTTCAAATGTGAATGGTGCTCTGAAAACAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_191204; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_306135
| Blastp | Probable boron transporter 2 from Arabidopsis with 75% of identity |
|---|---|
| Blastx | Probable boron transporter 2 from Arabidopsis with 73.88% of identity |
| Eggnog | solute carrier family 4(ENOG410XPHD) |
| Kegg | Link to kegg annotations (AT3G62270) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418827.1) |
| Pfam | HCO3- transporter family (PF00955.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |