Ll_transcript_307006

Id TrinityTRINITY_DN52248_c0_g1_i2
Name TranscriptLl_transcript_307006
SequenceTATGTACTAAATGCTAAACTGATCGTGCACATCCCTCTGCTGAGTCTGCTCTGTCTCTATTTCCTTGTCCTTATCTCTGAAAGAACCTGGGACCCAAACA CAAAATCCCGAATTTGCCCCTACCCAATTTGTCTTATAATATATATGGAAAAAATCCAACGTTACTGGCTTGAAAATATTATCATCATATATAAATAAAT AAACGAAAAACATGTTGCTTAGTTTTTGAATTGCGAACTGTTACGGCGGCGATGGAGGTCACCGGCGGAAGGAACAGACGGTGGGAGGTGGCGGCGGTGG ATCTCACAAAGGCGGCGCAGGAGAAAGGGAGTGATCCTCTGTTATGGGCGATTCAGATGTATTCGAATTTGAATTCGGCGGGAGAGTCGTTACCATCTAT TGAACTCGCTGAGTTTTTGGTTTCTTACATTTGTTGGGATAATAATGTTCCTATTCTGTGGAAGTTTCTCGATAAAGCTCTCATGCTTCAAATTGTTCCA CCTTTGCATATTCTTGCTCTTCTCTCTGTTAGGGTTCTTCCATGCAGGCATGTCCAACCTGCAGCATATAGGCTATATTTGGAATTCATCAAAAGACATG CTTTTGGTCTTAAATCTCAGACAAACAGGCCAGATTATCCGAGGGTCATGAAATCTATAGATGATGTTCTTCATCTTTCCCACATATTTGGCATGTCACA AAGTGAGCCTGGCATTCTGGTGGTTGAATTTATTTTTTCACTTGTCTGGCAACTGCTTGATGCATCGTTGGATGACGAAGGGCTGCTGGAACTTTCACTC GAGAAGAAGTCTAAGTGGGCAACACTATATCAAGAAATGGATCTGGACATGCATGATAATTATAATGATAAGAAGTCTGGACATCATGAGAAATTGAGAA ATGCAAATACCCTTATGGCTATCGAGATGATTGGGCAGTTTTTGCAGGATAAAATATCTTCAAGGATTCTTTACTTGGCTCGCCGAAATTTGCCTGCACA TTGGCTATGTTTTGTTCAGAGGTTGCAGCTGCTTGGAACAAATTCATTAACATTGAAAAAGTCAAGAGATTTAAGTCCTGAGGCACTTCTGCAACTGACT TCAGATACTTCTGTGGTCTTGTCTCGAGAATGCAAAACAAGGTCACAACAGAAGTTCCATACAGTTATGGATTTTGAATATCTTTCTTCTTCAGCATCAC TCTGCCATGGTGCAACTCACTCTGCTCTTTGGATTCCTCTTGATCTCGTGCTGGAGGATGCCATGGATGGATATGAAGCTAGTGCAACAAGTGCTATTGA AATAATAAGTGGTTTGATAAAGACTCTCCAAGCCATAAACAGAGCCTCTTGGCATGACACCTTTTTAGGCCTTTGGTTAGCAACTCTTCGTCTTGTTCAG AGGGAAAGAGATCCTATTGAGGGCCCAATGCCTCATCTTGATACTCGCTTATGCATGCTCTTGTGCATAATGCCTCTTGTTGTTGCTGATCTTATTGAGG AGGAGGAGGAAAGGACACCAATTGATGAAATAGAAACAGACAGTGGTCCTACAAATAACTGGAAAGAGAAGGTTCCAGGAAAGCGTCGCAGTAATTTAGT CACAAGTCTGCAGGTATTGGGCGATTATCAGAGCTTGCTCACTCCACCTCAATCTGTTGTGTCTGCTGCGAACCAGGCTGCTGCAAAAGCAACGCTCTTT GTTTCTGGCTTCTCAATAGGGAGTGCATATGTTGACTGCCTCAGCGTGAAAGAGATTCCAATTAACTGTTCTGGAAACATGCGCCATCTACTAGTTGAGG CTTGTATTGCTCGAAATCTACTCGACACATCAGCATATTTATGGCCAGGTTATATCAAGGGACATATCAATCAAATACCTCAGTGTATGCCAGCTCAAGT ACCTGGTTGGTCATCATTTATGAATGGAGCACCACTTACTTCAGAGATGGTAAATGCTCTGGCTTCAAGTCCTGCTACATGGTATGTCAGATGCTCTTTT TTGTAAATTTACCCAAAGGTAAAGCAACTGAACTTACGCTCCTGGATTTAATGGAAGCTTAGCAGAACTGGAGAAAATGTTTGAAATTGCAATTGGGGGA TCAGAAGACGAGAAGATATCTGCTGCTGCTATTCTTTGCGGGGAATCCCTAATTAGAGGATGGAACATACAGGAGCACACTGCTCATTTCATTCTTAGGC TATTATCTCCACCGGTTCCTCTAGAGAACACTGAAGGAAACAACCATTTGATTGATTATGCTCCAATACTTAACGTACTCTTTGTTGGAATTGCATCTGT TGATTGTGTTCAAATATTTTCGCTTCATGGTTTGGTAAGTTCAATTCAAACCCTAATTATAAGTCTTGTCAAACAATGTTATAATTTTTTCTCTTCATAC TGAAAATTTCTATAAAATTGAAGATACTTAAAGTGATGGATGAAATAAAAACATTTGGCCTGTCATTTGAGTTTTAATGGATGTTGAATTCAGGTTCTTA GCTTTAATTGCTGTAGGAGAAGAATAACTGTCCAATATAAATGACGTTACTCAAGTTGAGATTGTTTTGCATACATTAGAATATAGTGTCTGTGTTGATT GGTTTGGTAATGTCCTGAATGTGGATTAGAAAATTTGTTCCACGGTTTGTTTGTGTTCAGTTTTTTCATGAATGTCGATGTAGAAGAGAAAGTGCATGAC AATTACCTATCCTGCTTATGACCTGCACAGTTGTATATAACATATCATATTTTTTTATATGTAGCACATTAGTTATTATATATGCAGTTAATAGATTATT CTGAATAAAAAAATATTAGGTTTAGGGAGATAAAGCAGGTAAAACAAGGGAGGAGTGCTAGGATCAGACTCTAACACACTCCTATCAACACACTCCAAGC TATTGATCCACATTCCCACTTTTTAAAACATGTCACCTGATAACCTGCCTTCCCAGTTTACACATACTTCAAACTGTAACCCCCTCACTCGTTCGAAGAG CAACAATTACAGTTTGTTAGATTCACTCTAGGAACTTTATGGGCAAATAATCAATTCAACTGAACCTTCTCCAGGAGCAATAGGCGTAATTTGACTAATT TCCTCTTTAATTGCCATCCTGGCCATCACTAATAGAAAGACCAATTTTTTTTTCCAGAGCCTGGGTGTAATTCCAAATCCTGATCATATCTTACCCAGAT AAGATAACAGGAAGGCCTTGCACCTAAATCGGTGTCAATTGCACAATCCCCCTGCCTTTCAACTTGTTCAAAACCAGCTTCGAAGCCTCATATCCTTAAC ACAGTTGAGGGCAATTTATATTCCTAAGGGTTTTTCTTAGCTAATTCATCAAAATACTTAAGGGTTTTTCTATCACACAATTTCCCAATCAGCTCTTTCT CCTGTTGAACAATCTTTTCTGTCACAATGATCTCATGTTGCTCTTCGTATGAGTTTGTAGAAGATTAAGGTTTTAAGAGTGGGTGATGTGGACCAATAGC TTGGAGTGTGTTAGAGAGTATGGTCCTAGCACTCCTCAAAACAAGAAAGGAATTATGCATTCTCACTTAAATGCATCCTTTCTATTTTCATCTCTTTTTT GTTCTATTTTACTTTTATGATAGTTTGAATTAGTGCATTTCCCAAATCTACCAACAGGTTCCGCAGCTTGCATGTTCATTGATGCCAATTTGTGAAGTTT TTGGGTCTTGTGTGCCTAATATTTCATGGACACTGACCTCAGGGGAGGAAATATCTGCCCATGCCGTGTTTTCAAATGCATTTATTCTTCTTTTAAAGCT ATGGAAATTTAATTGTCCTCCTATTGAACATGGAATTGGAGATGTACCTACTGTTGGTTCTCAATTAACTCCTGAATACCTACTATTGGTTCGAAACTCC CACTTAATGTCAGCCGGTAACATCCACAGAGATCGGAACAGGAAGAGGTTATCTGAGATTGCGAGTTTATCATCGCCAAATTCTGTATTTGTTGACTCCT TTCCAAAATTAAAAGTCTGGTACCGGCAGCATCAAGCATGTATAGCTTCAACATTGTCTGGTCTTGTTCATGGAACCCCTATTCATCAAATTGTTGATGG GCTTCTTAACAGGATGTTTAGAAAGATTAATAAAGGAGACCATATTACTATTACATCTGGAAGCAGTAGTTCTTCTGGACCTGGAAATGAAGATACATCT ATAGGACCAAAGTTGCCTGCTTGGGATATTTTGGAAGCCATTCCCTTTGTTGTTGATGCTGCTGTCACAGCCTGTGCTCATGGAAGACTGTCTCCTCGTG AGTTGGCAACAGGTATGTGTGTTTAGGTCAGATAAATCCAAGGGGACACACCAAGTAACTTGAAGAAGTAGTGATGTCTAAAGTACTATAGAGCTCTAAC ATGTTGGCAAACTATATAAATATTCGCTCAGTAGCTTAACCTTTCAAAATTATCCTTGATGTCTTCACAGCAACCAAATAAGTTCACTTAGATGTTCCTT CATGAATGCATTATCAACAATGTCATAGTATCAGATTTTTTTTCTTATTTTGTTAATATCAGGGCTGAAAGAATTAGCTGATTTTCTTCCTGCATCATTG GCAACTATAATAAGTTACTTCTCTGCTGAAGTAACTCGAGGTGTTTGGAAACCTGTATTTATGAATGGAACGGATTGGCCAAGCCCTGCTGCAAATCTAT TGAACGTTGAGGAACAGATCAAGAAGATTTTGGCTGCGACTGGTGTTGATGTGCCTAGCCTTGCTCCAGGAGGCAGCTCACCTGCCACACTTCCATTGCC ATTGGCTGCTTTCACAAGTCTCACCATAACCTACAAAGTTGACAGAGCATCTGAGCGTTTTCTGAATTTGGCTGGCCAAACACTGGAGTCCCTTGCTGCA GGTTGTCCATGGCCTAGCATGCCAATTGTGGCTTCCTTGTGGACCCAAAAGGCAAAACGTTGGAGTGACTTCCTTATCTTCTCAGCTTCTAGAACAGTCT TCCTCCATAATAGGGATGCAGTTGTTCAACTTCTTAAAAGCTGTTTCACAGCTACCCTTGGCATGAATAGCTCTCCTATCTCAAGCAATGGTGGTGTTGG AGCCCTCCTTGGCCATGGATTTAAGTCCCATTTTTGTGGAGGGATGTGCCCTGTTGCTCCAGGAATTCTCTACTTACGTGTTTATCGGTCAATCAGAGAT GTTGTTTTCTTGACAGAAGAAATTGTTTCCATCTTGATGCAATCTGTGCGAGAAATTGTATGTAGTGGTCCGTCAAGGGAGCAATTACAGAAGTCGAAAG CAACCAAAGATGGCATAAAATACGGACAGGTTTCACTTGCCGCAGCAATGACTCAGGTGAAACTTGCAGCTGCTCTTGGGGCTTCTTTAGTATGGCTATC TGGAGGGTTGGTGCTGGTTCAATTATTAATAAAAGAGACTTTGCCCTCATGGTTTATATCTGTTCACAGATCAGGCCAGGAAGAAAAGTCAGACGGAATG GTTGCAATGCTTGCTGGATATGCACTTGCTTACTTTGCAGTGCTTAGTGGGGCTTTTGCTTGGGGAGTTGACTCATCATCATCGGCTTCAAAACGACGTC GAAAAGTCTTAGGTGTCCACATGGAGTTTCTGGCAAGTGCACTCGATGGAAAAATATCACTTGGCTGTGATTCAGCTACTTGGCGAGCCTATGTGTCAGG GTTTGTGAGCCTGATGGTTAGTTGCACGCCAAACTGGGTGCTAGAAGTAGATGTCGATGTGTTGAAGAGACTGAGCAATGGCTTGAGGCACTTGAATGAA GAGAAGCTTGCACTTGCTTTGTTGGGTAATGGTGGGGTTGGTACTATGGGTGCTGCAGCTGAACTCATAATTGAAAGTGGAAGGTAAGCTTATTCTCCAG CACCTGTGCCTTTTAGTATGCTTATGTACAGTAGTTTCATGTTTAAAAACTTGTGCAGTGCTAAATCTCCTCTTTTGTTTCAAAAGCATCACTTATGAGA ATGGAAAATTTTGTATCTGAACTATGCTCAATCTAAGGTAACTTTCTTTCATGTTTGAAGTGATGAAACATTGCATAGGTAAAGATATGTTAAGTTTTTT ATTCATTATTCTGGGGGGAAATAAAACTACCAACTATTTATGAATCTATTAGTATTTTATTATTATATCACTCCATTGCTAAGGTATATAAGTGATTTGA AATACTGTGTATAAAGTATAATCAATGAACATAGTATTAGACTTGGGTACTATTGTGTCTGAAATGTGAATGGTATTAATATATTTCTCCAATTGTTTCT AGCACAACTTTGCTAATTAGCAAAAGCAAAATTATTTTCTATTTCCACTTTTCTTTCATTAGTTTTTATTAAAAAACTTACTATTTTGAAGTTATCAAC BLAST
Tissuepods
Gene nameLI_gene_191231; 
Additional informationdetails; 

Expression of Ll_transcript_307006

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_307006
BlastpMediator of RNA polymerase II transcription subunit 33A from Arabidopsis with 55.57% of identity
BlastxMediator of RNA polymerase II transcription subunit 33A from Arabidopsis with 55.57% of identity
EggnogComponent of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Involved in the repression of phenylpropanoid biosynthesis. May compete with MED33B for common binding partners or for occupancy in Mediator(ENOG410XPER)
KeggLink to kegg annotations (AT3G23590)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019419371.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;