Ll_transcript_307040

Id TrinityTRINITY_DN52248_c0_g1_i34
Name TranscriptLl_transcript_307040
SequenceTATGTACTAAATGCTAAACTGATCGTGCACATCCCTCTGCTGAGTCTGCTCTGTCTCTATTTCCTTGTCCTTATCTCTGAAAGAACCTGGGACCCAAACA CAAAATCCCGAATTTGCCCCTACCCAATTTGTCTTATAATATATATGGAAAAAATCCAACGTTACTGGCTTGAAAATATTATCATCATATATAAATAAAT AAACGAAAAACATGTTGCTTAGTTTTTGAATTGCGAACTGTTACGGCGGCGATGGAGGTCACCGGCGGAAGGAACAGACGGTGGGAGGTGGCGGCGGTGG ATCTCACAAAGGCGGCGCAGGAGAAAGGGAGTGATCCTCTGTTATGGGCGATTCAGATGTATTCGAATTTGAATTCGGCGGGAGAGTCGTTACCATCTAT TGAACTCGCTGAGTTTTTGGTTTCTTACATTTGTTGGGATAATAATGTTCCTATTCTGTGGAAGTTTCTCGATAAAGCTCTCATGCTTCAAATTGTTCCA CCTTTGCATATTCTTGCTCTTCTCTCTGTTAGGGTTCTTCCATGCAGGCATGTCCAACCTGCAGCATATAGGCTATATTTGGAATTCATCAAAAGACATG CTTTTGGTCTTAAATCTCAGACAAACAGGCCAGATTATCCGAGGGTCATGAAATCTATAGATGATGTTCTTCATCTTTCCCACATATTTGGCATGTCACA AAGTGAGCCTGGCATTCTGGTGGTTGAATTTATTTTTTCACTTGTCTGGCAACTGCTTGATGCATCGTTGGATGACGAAGGGCTGCTGGAACTTTCACTC GAGAAGAAGTCTAAGTGGGCAACACTATATCAAGAAATGGATCTGGACATGCATGATAATTATAATGATAAGAAGTCTGGACATCATGAGAAATTGAGAA ATGCAAATACCCTTATGGCTATCGAGATGATTGGGCAGTTTTTGCAGGATAAAATATCTTCAAGGATTCTTTACTTGGCTCGCCGAAATTTGCCTGCACA TTGGCTATGTTTTGTTCAGAGGTTGCAGCTGCTTGGAACAAATTCATTAACATTGAAAAAGTCAAGAGATTTAAGTCCTGAGGCACTTCTGCAACTGACT TCAGATACTTCTGTGGTCTTGTCTCGAGAATGCAAAACAAGGTCACAACAGAAGTTCCATACAGTTATGGATTTTGAATATCTTTCTTCTTCAGCATCAC TCTGCCATGGTGCAACTCACTCTGCTCTTTGGATTCCTCTTGATCTCGTGCTGGAGGATGCCATGGATGGATATGAAGCTAGTGCAACAAGTGCTATTGA AATAATAAGTGGTTTGATAAAGACTCTCCAAGCCATAAACAGAGCCTCTTGGCATGACACCTTTTTAGGCCTTTGGTTAGCAACTCTTCGTCTTGTTCAG AGGGAAAGAGATCCTATTGAGGGCCCAATGCCTCATCTTGATACTCGCTTATGCATGCTCTTGTGCATAATGCCTCTTGTTGTTGCTGATCTTATTGAGG AGGAGGAGGAAAGGACACCAATTGATGAAATAGAAACAGACAGTGGTCCTACAAATAACTGGAAAGAGAAGGTTCCAGGAAAGCGTCGCAGTAATTTAGT CACAAGTCTGCAGGTATTGGGCGATTATCAGAGCTTGCTCACTCCACCTCAATCTGTTGTGTCTGCTGCGAACCAGGCTGCTGCAAAAGCAACGCTCTTT GTTTCTGGCTTCTCAATAGGGAGTGCATATGTTGACTGCCTCAGCGTGAAAGAGATTCCAATTAACTGTTCTGGAAACATGCGCCATCTACTAGTTGAGG CTTGTATTGCTCGAAATCTACTCGACACATCAGCATATTTATGGCCAGGTTATATCAAGGGACATATCAATCAAATACCTCAGTGTATGCCAGCTCAAGT ACCTGGTTGGTCATCATTTATGAATGGAGCACCACTTACTTCAGAGATGGTAAATGCTCTGGCTTCAAGTCCTGCTACATGGTATGATCTAATGTTTCTT TACTTCATTCTCAAGTTTAAAGCATAAGTCACTGTAAGAGTGAATGCTGAAACATGATATCATTTGCTTTCAATAAGAATCTATTCTACACTAAAATTAT AACTCAACAACTGTGAATTAAGTTGATAAAGTTTAACTTATTTTTAAAATTCCATGGCCTGGTCTTCAGTTATTTTTCTTTCCTGAAGCCAGGTATGTCA GATGCTCTTTTTTGTAAATTTACCCAAAGGTAAAGCAACTGAACTTACGCTCCTGGATTTAATGGAAGCTTAGCAGAACTGGAGAAAATGTTTGAAATTG CAATTGGGGGATCAGAAGACGAGAAGATATCTGCTGCTGCTATTCTTTGCGGGGAATCCCTAATTAGAGGATGGAACATACAGGAGCACACTGCTCATTT CATTCTTAGGCTATTATCTCCACCGGTTCCTCTAGAGAACACTGAAGGAAACAACCATTTGATTGATTATGCTCCAATACTTAACGTACTCTTTGTTGGA ATTGCATCTGTTGATTGTGTTCAAATATTTTCGCTTCATGGTTTGGTAAGTTCAATTCAAACCCTAATTATAAGTCTTGTCAAACAATGTTATAATTTTT TCTCTTCATACTGAAAATTTCTATAAAATTGAAGATACTTAAAGTGATGGATGAAATAAAAACATTTGGCCTGTCATTTGAGTTTTAATGGATGTTGAAT TCAGGTTCTTAGCTTTAATTGCTGTAGGAGAAGAATAACTGTCCAATATAAATGACGTTACTCAAGTTGAGATTGTTTTGCATACATTAGAATATAGTGT CTGTGTTGATTGGTTTGGTAATGTCCTGAATGTGGATTAGAAAATTTGTTCCACGGTTTGTTTGTGTTCAGTTTTTTCATGAATGTCGATGTAGAAGAGA AAGTGCATGACAATTACCTATCCTGCTTATGACCTGCACAGTTGTATATAACATATCATATTTTTTTATATGTAGCACATTAGTTATTATATATGCAGTT AATAGATTATTCTGAATAAAAAAATATTAGGTTTAGGGAGATAAAGCAGGTAAAACAAGGGAGGAGTGCTAGGATCAGACTCTAACACACTCCTATCAAC ACACTCCAAGCTATTGATCCACATTCCCACTTTTTAAAACATGTCACCTGATAACCTGCCTTCCCAGTTTACACATACTTCAAACTGTAACCCCCTCACT CGTTCGAAGAGCAACAATTACAGTTTGTTAGATTCACTCTAGGAACTTTATGGGCAAATAATCAATTCAACTGAACCTTCTCCAGGAGCAATAGGCGTAA TTTGACTAATTTCCTCTTTAATTGCCATCCTGGCCATCACTAATAGAAAGACCAATTTTTTTTTCCAGAGCCTGGGTGTAATTCCAAATCCTGATCATAT CTTACCCAGATAAGATAACAGGAAGGCCTTGCACCTAAATCGGTGTCAATTGCACAATCCCCCTGCCTTTCAACTTGTTCAAAACCAGCTTCGAAGCCTC ATATCCTTAACACAGTTGAGGGCAATTTATATTCCTAAGGGTTTTTCTTAGCTAATTCATCAAAATACTTAAGGGTTTTTCTATCACACAATTTCCCAAT CAGCTCTTTCTCCTGTTGAACAATCTTTTCTGTCACAATGATCTCATGTTGCTCTTCGTATGAGTTTGTAGAAGATTAAGGTTTTAAGAGTGGGTGATGT GGACCAATAGCTTGGAGTGTGTTAGAGAGTATGGTCCTAGCACTCCTCAAAACAAGAAAGGAATTATGCATTCTCACTTAAATGCATCCTTTCTATTTTC ATCTCTTTTTTGTTCTATTTTACTTTTATGATAGTTTGAATTAGTGCATTTCCCAAATCTACCAACAGGTTCCGCAGCTTGCATGTTCATTGATGCCAAT TTGTGAAGTTTTTGGGTCTTGTGTGCCTAATATTTCATGGACACTGACCTCAGGGGAGGAAATATCTGCCCATGCCGTGTTTTCAAATGCATTTATTCTT CTTTTAAAGCTATGGAAATTTAATTGTCCTCCTATTGAACATGGAATTGGAGATGTACCTACTGTTGGTTCTCAATTAACTCCTGAATACCTACTATTGG TTCGAAACTCCCACTTAATGTCAGCCGGTAACATCCACAGAGATCGGAACAGGAAGAGGTTATCTGAGATTGCGAGTTTATCATCGCCAAATTCTGTATT TGTTGACTCCTTTCCAAAATTAAAAGTCTGGTACCGGCAGCATCAAGCATGTATAGCTTCAACATTGTCTGGTCTTGTTCATGGAACCCCTATTCATCAA ATTGTTGATGGGCTTCTTAACAGGATGTTTAGAAAGATTAATAAAGGAGACCATATTACTATTACATCTGGAAGCAGTAGTTCTTCTGGACCTGGAAATG AAGATACATCTATAGGACCAAAGTTGCCTGCTTGGGATATTTTGGAAGCCATTCCCTTTGTTGTTGATGCTGCTGTCACAGCCTGTGCTCATGGAAGACT GTCTCCACGTGAATTGGCAACTGGTATGTGTTTAGGTCAAATAAATCCAAGGGAACATGTCAAGTAACTTGTAGAAGTAGTGATTTCTAAAATCTAAAGT AGTGTATAGATCTAATATGTTGGCAAACATTAACCTTTCAAAATTATCCTTGATGTCTTCAGACCAACCAGATAAGTTCATGTAGATGTGCCTTGATGTA CGAATTATGCAACCATGCCATAATATCAGAAATTTTCTTATTTTTGTTAATATCAGGGATTAAAGATTTAGCTGATTTTCTTCCTGCATCTCTGGCAAGT ATAATAAGTTACTTCTCCGCTGAAGTAACTCGGGGTGTTTGGAAACCTGTATTTATGAATGGAACGGATTGGCCAAGCCCTGCCGCAAATCTACTGAACG TTGAGGAACAGATCAAGAAACTTTTGGCCGCAACTGGTGTTGATGTGCCTAGCCTTGCTCCAGGTTTTTTTGTCTGGACACTGAATTGTAGTTTTTTAAT AAAAATCTTGAATTATAAATATAATGCATTTTCAGGAGTTTAAAAGTCGTGTTTCAGCACTACAACTTACTTTATCAATATATTATTAAAATATCGTGCC CTTCAAAATAACCTTCTACATTGGTTGAACTGAGCATTAATTTCCAATTGCTTTTCAGGAAATGTCTTTTTCCTTGATTGTCCTTTTCTCTTTCACATTA ATATTACATTATTGTTTGGCATTGTGAGCAATTGTCGTTTCTACAGGAGGCAGCTCACCCGCCACACTTTCATTGCCCTTGGCTGCTTTCACAAGCCTCA CCATAACCTACAAAGTTGACCGAGCATCAGAGCGTTTTCTTAATTTGGCTGGCCAAACATTGGAGTCTCTTGCTGCAGGTTGTCCATGGCCTAGCATGCC AATTGTGGCTTCCTTGTGGACCCAAAAGGCAAAACGTTGGAGTGACTTTCTTATCTTCTCAGCTTCTAGAACTGTCTTCCTCCATAACAGGGATGCAGTT GTTCAACTTCTGAAAAGCTGTTTCACATCTACCCTTGGCATGAATAGCTCTCCTATCACAAGCAGTGGTGGTGTTGGAGCCCTACTTGGCCATGGATTTA AGCCCCATTTTTGTGGAGGGATGTGCCCTGTTGCTCCAGGGATTCTCTATTTACGTGCTTATCGATCAATCAGAGATGTTGTTTTCTTGATAGAAGAAGT TGTTTCCATCTTGATGCAATCTGTGCGAGAAATTGTATGTGGTGGAAAGTCAAGGGTGCAATTACAGAAGTCGAATGCAACCAAAGGGGGCATAAAATAT GGACAGTTTTCACTTTCCGCAGCAATGACTCGGGTGAAGCTTGCAGCTGCTCTCGGGGCTTCATTAGTATGCCTATCTGGAGGCTTGACGCTAGTTCAAT TATTAATAAAAGAGACTTTGCCATCCTGGTTTATATCTGTTCACAGATCAGGCCAGGAAGAAAACTCAAATGGAATGGTTGCAATGCTTGGTGGATATGC ACTTGCCTACTTTGCAGTGCTTTGTGGGGCTTTTGCTTGGGGAGTTGACTCATCATCATCGGCTTCAAAACGACGTCCGAAAGTCTTAGGTGTTCACATG GAGTTTCTCGCAAGTGCACTTGATGGAAATATATCACTTGGCTGTGATCCGGCTACTTGGCGAGCCTACGTGTCGGGGTTCGTAAGCCTGATGGTTGGTT GCGCGCCAAACTGGGTGCTGGAAGTAGATGTAGATGTGTTGAAGAGACTGAGCAATGGGTTGAGGCAGTTGAATGAAGAAGAGCTTGCACTTGCTTTGTT GGGTGATGGTGGGGTAGGTACTATGGGTGCTGCAGCTGAACTCATAATTGAAAGTGGAATGTAAACTTATCCTCTCTATTATGACAGCACCTGTGCCTTT TAGTATCCTTTGTACATCCATTCTTGTTTCAAATGCTGTGCAGTGCTAAATCACCTTTTTTTGTTTGGAAAGCATAACTTACGAGAATGGAAAATTTTGT ATCTAAACAATGCTCAACCCAAGGCATGTTTGAATCCATCAAATTGCATCTGTGTAAGTTCAGTTTCTAAACTCAGCTAAAGATGTGTTAAGTTTCTCAA ATGGGGTAAGGATTAAACCAAAGTGAAATTCAGTTTATTGGAATTTGGAAACCGTTG BLAST
Tissuepods
Gene nameLI_gene_191231; 
Additional informationdetails; 

Expression of Ll_transcript_307040

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_307040
BlastpMediator of RNA polymerase II transcription subunit 33A from Arabidopsis with 55.57% of identity
BlastxMediator of RNA polymerase II transcription subunit 33A from Arabidopsis with 55.57% of identity
EggnogComponent of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Involved in the repression of phenylpropanoid biosynthesis. May compete with MED33B for common binding partners or for occupancy in Mediator(ENOG410XPER)
KeggLink to kegg annotations (AT3G23590)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019419371.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;