Ll_transcript_304958

• Id Trinity: TRINITY_DN52249_c2_g1_i15
• Name Transcript: Ll_transcript_304958
• Sequence: TTTCATGCCTATCCATCTAAGATAATTAATTTGAATTTGACTGTTAGAGATAAATATTTGAAAATAATATAGAGTTCATCATTTGCTTCAAAACGTTCTC TCTCTCTCTCTCTCATTTTTTTGCAGCTTCCTTCAAAGCCACTCTTTCTCTTTCTCTCTCTCGCGATCAGAGCGAGGGAATCCAAACTTCGGCGCCGTTC TCCGCCGCATCGGTTCCTGTCTCCGTCCAACTTTCCGGCTTCCACTGGAATCGATCAATTAAATTGTGATCAAGCTCTTCTAGTGGGGCAGGGGGTGTAA ATCATGATGAATTTGCAACAAGCTGGGCAGCCTAAATCGTCTAATGGATATGGTCGTAGAAAATCTGAAAGAGAAGGGGTAACAAAATCAGAGAATAGGG CCCCATCTGGAAAATTAAATTTCAATAGATTGGCCAGTACAGGTGCAGTGATTGGCAGTAAAGGTGGTAGTTATGAGAGCCCTTCACATGATCGATTAGT ATATATAACAACATGTCTTATTGGGCACCAGGTGGAAGTCCAGGTGAAAAATGGATCTATATACTCCGGAATATTTCATGCAACAAATGCTGACAAAGAG TTTGGAATCATTTTGAAAATGGCCCGCATAGTCAAGGATGGTTCTTTGAGAGGCCAGAAGTCTGGTGTAGAATTTTTTGGCAAGGCCCCTTCAAAGATTT TAATTATACCTGCAAAGGAACTTGTACAAGTCATAGCAAAGGGTGTTGCTGTTACTAGAGATGACCAATCTAGTGAATCGCACCATGATATGCATCAGGA ACTCATGGTTGATTCATTGATATCTCAATCTCGTCATGTTGACCTAGGGAGAGAATTAAAACCCTGGGTACCTGATGAAGATGATCCTCAATGCCCTGAA CTGGAAAATATCTTTGATGGCCATTGGAATAGGGGATGGGATCAGTTTGAAATAAATGAGACATTGTTTGGTGTAAAAAGCACATTCAATGAGGAAATCT ACACAACAAAACTTGACAAAGGGCCTCAGACAAGAGAATTAGAAAGGCAAGCTTTAAGAATAGCTAGAGAGATTGAGGGAGAGGATACCCGAGATCTTCA TCTTGCAGAGGAAAGAGGCCTTAGCATACATGGAAACCTTGATATTGATGAAGAAACTATGTTCTCTTCAGTCTATAGGGGTAAAGGTGTTGATGATAGT GGATATGATGAAAATGAGGACATGTTTGATTCACACAATTCTGATACGTTTGGTGGCATTAAGTGGCCCAATGAAATAAGTGGTGGAAAAGGCAATGTTG GAGCTCCAACAGTGGGAAACTCATCCTATGTGTTAGCACCTGAACTGCCTGCCAAAAGCTACACATCTTTGGATGGAGAAAGCAGGATTCAGGAGAACTT GGTTAGTGATCTACCCAGAGGCAATGCTAATACAAAGGAAGAAAGTCAGGTGCAAGCTGAGGATGTTCAACTGTCAAAATCTGAGGATTCAAAGGCTTCA CTCTATCTGAAGAAAGATGGCTCAGATAAAGGGATATTATCTCCTAATGCCACCTCATATGCTCCTTCATCTCTTACTTTATCTAAGACTCATGAGAAGA CAGGATCACCTGGTGATCTGACTGAGGGTTCAGCATATGGCAAAGCGACTGGGGAAGCAAAATCTGCAAACTCACATCGGCCTTCTGCTCGTCCTGGTTT ATCTCCAAGTTCATCAGTGGGTTCATTGTCTTCTGAGAAATCAAGTCTCAATCCCAATGCAAAGGAATTCAAACTCAACCCTAATGCAAAGCTTTTTATT CCATCTCAAGCACCTATTCGGCCTCCCTCCCCTGCGTCTGAGGCTTCCTTCTATTTTCCAACTACTGTGCAAAATGTGCCAGGCATGCCCATGGGTATTG GAATTGGACCTAATTTTGCTGGGCCGCAACCTATCATATACAATCCACAAGTAGCACAAATGCAATCTCAAGCTTATTTTTATCCAAATGGGCCACAGTA CGGACAGCTTCTTGGTCCTAGACAAGCTGTATACATGCCAGGCTACCTACCTGAAATGCAATACAAGGGACGCGAGTATTGATGACTTGGCCGATTGTGC ATTCTTGGCAAGTCC
• Tissue: pods
• Gene name: LI_gene_191235;
• Additional information: details;

Expression of Ll_transcript_304958

FPKM

• PAB: 6.8
• PNAB: 6.2
• PS1: 10.5
• PS2: 8.1
• PS3: 9.1
• PW1: 6.3
• PW2: 7.8
• PW3: 10.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_304958

• Blastp: Polyadenylate-binding protein-interacting protein 4 from Arabidopsis with 42.63% of identity
• Blastx: Polyadenylate-binding protein-interacting protein 4 from Arabidopsis with 42.37% of identity
• Eggnog: stress granule assembly(COG5180)
• Kegg: Link to kegg annotations (AT3G14010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436523.1)
• Pfam: Ataxin 2 SM domain (PF14438.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;