Ll_transcript_304959

• Id Trinity: TRINITY_DN52249_c2_g1_i16
• Name Transcript: Ll_transcript_304959
• Sequence: ATTTTGTTTAAGAAATTGCATTTATCTCTCCTATAGGGGTGGTCAATGTAATATATGTATATAATTAGGGGTGGTTTGTGTAATAGTTAAGGGTGGTTTG TGTAAGTGTAAACAAGGGAGGAGTGGTTTGTGTATTTTCAATAAAACTCAGGGGGTGTTAGTGTAATTTACTCTATTTTATTTAATGTTTGACTAATGAC TCACTAGTTGAAGTAGTGATGCATTGACCCAGAACCCTGGTTGAGTCAATCACTGATTGGTGTGCTAAAACTATGTTGTAATCTTAATTTAAATCTGGGG ATAGCTGTTTTATGATTATATATTTATTCTTTCTATTGCAATACACTGTAAACTGTACCCTACGAATGGATTTTCTAACTATTGTGAATTAGTTGGCCGG GGCTGTAAGTGAGGATGAATTTGCAACAAGCTGGACAGCTTAAATCGTCCAATGGATATGGCCGTAGAAAATCTGAAAGAGATGGGGTAATGAAAACAGA GAATAAGATCCCATCTGGAAAATTAAATGCCAGCAGATTGGCCAGTACAGGTGCGGTTACTGGCAGTAAAGGTGGTAGTTATGAGAGTCCTTCACTTGAT CGACTAGTATATATAGCAACATGTCTTATTGGGCACCTAGTGGAGGTCCAGGTGAAAAATGGATCTGTATACTCAGGAATATTTCATGCAACAAATGCTG ACAAAGATTTTGGAATAATTTTGAAAATGGCCCACTTAGTCAAGGATGGTTCTTTGCGAGGGCAGAAGTCTGGCGTAGAATTTATCGGCAAGTCTCCTTC AAAGATTTTAATTATACCTGCCGTGGAACTTGTACAAGTCATAGCAAAGGGTGTTGCTGTTACTAGGGATGACCTAGCTAGTGAATCACACCATGATATG CATCAGGAAATCATGGTTGATTCATTTATATCTCAGTCCCGTCATGTTGACCTAGGGAGAGAATTAAAACCCTGGGTACCTGATGAAGATGATCCTCAAT TTCCGGAACTGGAAAATATCTTTGATGGCCATTGGAACAGGGGATGGGATCAGTTTGAAACAAATGAGGCATTGTTTGGTGTAAAAAGTACATTCAATGA GGATCTCTACACAACAAAGCTTGAAAGAGGGCCTCAGACAAGAGAATTGGAAAGGCAAGCTTTAAGAATAGCTAGAGAGATTGAGGGCGAGGACACCCAA GATCTTCATCTTGCAGTGGAAAGAGGCCTTCATGTAAATGAGAACCTTGATATTGATGAAGAAACTATGTTCTCTTCAGTCTATAGGGGTAAAGGTGTTG ATGATAGTGGATATGATGAAAATGAGGACACGTTTGATTCACATAATTCTGATACCTTTGGTGGTATATTTGGTTCGGCCATTAAGAGGCCTGGTGAAAT AGATAACAGAAGAGGCAATGATGGAGCTCCAACAGTGGGAAATCCCTCCTCTGTGGATCACCCACATTTCTTTCAGTCAAGTACTGGTGTGGATTTAATC CATTCTGGTTCGTTTGATCATGCTAAGCAGTTACTTTTGGATGGAGAAAGGAGGATTCAGGAGAACTTGGTTAGTGATCTACACGGAGGAAATGGTAACA CAAAAGAAGAAAATAACATACAAGCTGAAGATGTTCAACTGTCAAAATCTGAGGATTCAAAAGCATCACTCTACTTAAAGAAAGATTGCTCTGATAAAGG GGTATTATCTCCTAATGCCACCTCATATGCCCCTTCACCACTTACTTTATCTAAGACTCGTGAAAAGACAGGATCGCCTGGTAATTTGACTGAGGGTTCA GCATATGGGAAAGCAAAATCTGTAAATTCCCATGGGACATATTCCCGTTCAGATTCTGGGGTAGGTGTGGCAGTATCGTATCGTCCTGGTGGTTTATCTC CAAGTTCATCAATAGGTTCATTGTCTTCTGAGAAATCATCTCTCAATCCCAATGCAAAGGAATTCAAGCTCAACCCTAATGCAAAGAGTTTTACTCCATC TCAAGCACCTATTCGGCCTCCCTCCCCTGCATCTGATGCTTCCTTCTATTTTCCACCTACTGTACAAAATGTGCCAGGCATGCCCATGGGTGTTGGAATG GGACCTACTTTTGCCGGGCCTCAACCTATCATATACAATCCGCAGGTTGCACAAATGCAATCTCAAGCATATATTCATCCAAATGGGCCACAGTATGGAC AGCTTCTTGGTCCTAGGCAAGCTGTATACATGCCAGGCTACCTACCTGAAACGCAGTACAAGGGACGCGATTATTAATGAGTTGGCTGGTTATGCATTCT TGGCAAGTCCACTCCTTGCCTGTAATGGATAAACTCAGTGAATGACTTGGCTGATTGTGCATTCTTGGCAAGTCCACTCCTTATTTGAAGATCCATGAAG CTTTTATTTATATATTCCATGGGAGCTGGCTTTTCCTGGGATATGCTTTTTTATGACCTTGTAGTGTTTCTCAGGTTTTGGTTGTGTAATACCTTAAACT AAGATTGACAATTATGCAACATTTACTTATCATACAATCCTCTGACCCTTGAGATATGCCTGCATCCATTAGGTTGCTGCAATATCAGTTTTAATTATTG GGATATTACATACATGGTTTTAATATTATATAACATGTGGTTAAGACAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_191235;
• Additional information: details;

Expression of Ll_transcript_304959

FPKM

• PAB: 18.8
• PNAB: 13.3
• PS1: 15.9
• PS2: 11.7
• PS3: 15.2
• PW1: 11.2
• PW2: 11.7
• PW3: 9.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_304959

• Blastp: Polyadenylate-binding protein-interacting protein 4 from Arabidopsis with 44.28% of identity
• Blastx: Polyadenylate-binding protein-interacting protein 4 from Arabidopsis with 43.75% of identity
• Eggnog: stress granule assembly(COG5180)
• Kegg: Link to kegg annotations (AT3G14010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458262.1)
• Pfam: Ataxin 2 SM domain (PF14438.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;