| Id Trinity | TRINITY_DN52251_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_306752 |
| Sequence | GCTCCAACTATTTCCCTCACTTCTCTCTCTCTTTCCTCACTCTTTCGATCAAGAACAAAAATGATAAACAAGAACAATAACACGTACAAACTACTACTCA ACCACACGAGTACACTCTTTCTCTTCATCCTTTTCTCAACACTCACTGTTTCTTTTGCACGCCATGTCGCCGAAGATAAAAACCCTTTTACACCAAAAGC TTCCGTGATCCGCTATTGGGACACACATGTTAGCAACAACTTGCCCAAGCCATCATTCCTCCTCTCCAAAGCCTCACCGCTAAGCGCAGTTGACACCGCC ACGTTTGCCAAACTAGCCGCCACCAACACCCTCTCCACGCGTCTGCCGGAGTTTTGCTCCGCCGCCAACCTCCTCTGCTTCCCGGAAGTACTCCCCAGCT TAGAAAAACACACACACGACGTCAAATTTTCAGGGTATGATGATGACCATAATTTTACCAACTACGGAACGAACCAAGCCGGTGGGCTCGATTCGTTCAA GAACTACTCTAACGGCCTTTACGCTAATCCGGTGAGCGATTTCCGGCAATACAGCCGGAACTCCGCCGGCCATAAGGAAAAATTCAACAGCTACGGCAAT GATGCGAATGTTGTAGACCAGAGCTTCCACACCTATGGCACTGCCACTGCCGGCGGCTCCGGCGAGTTTAAGGAGTATGCAGCCAGAACCAACGTCCCCG ATCTGCGATTTTCGACATACTCCGATAACGCTGTGGGGAGGGAACAATCTTTCTCTAGCTATAGTGAGGATGGAAATTCGGGTCAGCAACGATTCACAAG TTATGGTAAGGGTGGTCTTCATGCAGATAACAAGTTTAAGAGTTATGGAACAAATTCAAATGTTGCTGGGTCTGATTTCTCAAACTATGCTGAGAAAGGG ACTTCACCAAATGACACGTTCACAAACTATGGTGTTAACATGAATAACCCAACTCAGAAGTTCAAGAACTATGGCGATGGAAGCACTTTTGCTGCAGAGA GCTTCGCTAATTATAGGGATAAATCGAATGTGGGTGATGACTCGTTCCAATCTTATGCCAAGAACTCAAGAGGAGGTGCACAAGTAGATTTCAATAATTA TGGAAAATCCATTAACGAAGGAAGTGACACATTCAAGGGGTATGCAAAAGGAGCTGATATAGGTCACAAAGTTGGGTTCAAGGGATATGGTATTAACAAC ACCTTCAAAGATTACACAAAAGATGGTGTCTCATTTTCTAGCTACACAAATACTACAACCTCAACTATTCACTCAATCAATATCAATACCATAAGTGATT CTTTGGTCAAAAAATGGGTTCAACCTGGTAAATTCTTTAGGGAGAAAATGCTAAAACAAGATATAATTATGCCTATACCCGATATAAGAGATAAATCACC TAAAAGGTCATTTTTACCCCGACCCATTTTGTCAAAAATACCCTTCACTTCTTCTAAGATCTCTGAGCTGAAGGAAATGTTCAAGGTCTCTGATAACTCC TCTATGGAAAAGATGATGATGGAATCATTGGGGGATTGTGAGAGGGCAACCAAGCATGGGTGAGACAAAAAAATGTGTTGCTTCAGTTGAGGACATGATT GACTTTGCAACTTCAGTTCTAGGTCACAATATTGCAGCTAGAACCACTGAGAATGTTAATGGTTCTAAAACAAATGTGATGGTTGGTAAGGTTAGAGGAA TAAATGGTGGGAAAGTTACTGAATCTGTTTCTTGTCATCAAAGTTTGTTCCCTTATTTGCTTTATTATTGTCACTCAGTTCCAAAGGTTAGAGTCTATGA AGCAGATCTTTTAGACCCAAAATTGAAGACCAAGATTAACCATGGGGTTGCAATTTGTCACTTAGACACAACAGCTTGGAGTCCCACCCATGGTGCATTT TTAGCACTTGGATCTGGTCCAGGTCGAATTGAAGTGTGTCACTGGATCTTTGAGAATGATCTGACTTGGACTATTGCCAATTCAGAAAGAATTGTTGCTG ATTAAGAAAACTTAGCAAGCTCCACCACGAAAATGTGGTTAATTTCAAGTTTGTGTTCTTTGTTTCTTGTGTTTACTCAAATAATCATGAGCTTGACTTT TAAGTGTGTATTTTATGTCTTTCCTATAAATGAATAATTGGAAGGCAATGAATCAATTGGGTATTTATGTAGCACTTATTAGCCACTCATATTACTTTTT AGTTGTGCACTAATAAAACCCAATAAAATAAGAGTTTATGTTGTTTATAATAATCATATTTTATTCCTTCTTGCATGGAGGACCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_191251; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_306752
| Blastp | Polygalacturonase 1 beta-like protein 3 from Arabidopsis with 52.02% of identity |
|---|---|
| Blastx | Polygalacturonase 1 beta-like protein 1 from Arabidopsis with 55.36% of identity |
| Eggnog | Noncatalytic subunit(ENOG410YDAC) |
| Kegg | Link to kegg annotations (AT1G70370) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439186.1) |
| Pfam | BURP domain (PF03181.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |