| Id Trinity | TRINITY_DN52253_c1_g1_i30 |
|---|---|
| Name Transcript | Ll_transcript_305130 |
| Sequence | AGAAATATAGCCTTCCTTGAGGAGCCTAAAACCCTTACATTTCCGCGCCATTTCTGTTCCCCTCTCAAAGCCCTAGCTTCTTCTGCTTCGATCATTTCCT CCATCTTTCAATAATGGCGATTGTCACTTCCAGGGACGTTCAAGAGATCGTAGACAAATTATCTTCTGTTAAAGTTAAAGCTCGCGAAGAAGGGATCAAG TTGTTAAATACTTGGTTAGAAGGAGAAAGATCTTACAGCTTCTGCAAATATCTTGGACTGAATACTGCAAGGCTTAAACCAGATGAAGTTCCTCATTCTG AAACATGGCCCTTTGTTGTTTCTTTACTTATTCAATCCGCATCATTGGAAATATCCTCCAGTAAGCGGAGAAATCCGAAGATGATATATGCAAAGACTCT TAGAGTTGTCGTGCAACGAGCAGAAGATGCTAAGTATTCAGGTAAAATGCTGCCTCTGTCATCTGTGGTTAAACCACTTTTTAGCCATGTTTGGGATGTC CTGAGCAACATTCCAAGCTTTCACTCAGAGTATGGGATAATCCTCCGGCATCTATTGGCTGTTAGGGATTATAGTTTCCAGATGAGGAAGCGCATTTACT GCAGCCTGGTGTTTCTGTACATTGAGAAGGTTGAAGTGAGTTTGGATGGGAAAAATATTAATCAGTGTACTTCCAAGGAGGAAGTCTTCCGCTATGTCTT GACGCTTCATTCGCTTTTGGAAAATCCTCCTGGAGACTACCCTGATAATCTAAGAGAAGATATTGTTAAGGGGTTTGTTAGTATCTGTTCATTCATCAGG GAGGAGGGAAAGATATCACGCAAGCTTATTGAGTGTATTAATACATATTTGTTAAATGATGGTCCAAATTTGGGCCATCAGTTGTTGGAAATCCATAATG CCATGCAACAGTTTGTGTTCTGCTATTGGCTGACAACACATGATCGGCTTCTTAAGGATTCACTTATGCTCTATGCAAAGATACAGTTAAATTTAATGAG GGGTGCCACAGATAGATGTTTATTGGTAGAACAGCTTTTAGATGTGGTTTGTAAAGATCTTGATCAAGGTAGCATGTCTGGCACTTCCATGCCCCGGAGT GATGGAAACAAAGATGATAAACTTGGAGCTTTGAGTAGCTCACAATCTAGCTTGGTGGAACTTGCATCAGTTCTATTTTATAGGGCATGCCTTAATACAA CCAGAGCCTTATTAAGCGAAAAACGGGCCAAGAGGGAGCCTGCTGCTGTACTCCTGAGGGAGGCACTCATGAAAGGCAAATGGCTATGGACTGCTGCATT TTGTTTTCTCACTCGAAACTACCATACTCGCATGCGCAAAGATCTGTTTCTCTACTGGTTTGAAGGCATATGGATGAGCTTTGACAGCATACTGAATTCT GCAAATGTGGAGCATGCCTATGATGGATTGTTGTGGACTCTGCGGAGTTTGCAGGAACTTTCTTCTGTTCTGTTGCTTCCAAATTCAGTGATGGAGATAT CGTCAATGTCAGTTTCTACCTTAAATGAGTTCATCAATGGCTGGCAACTAGTATGGAGTACTGTAGTGCATGGGTTGCCGATTTTCAGCATTATAACCAC TCTTGTGGAAGCTGCTTTGGTGCTTCTTAGCAATATAACCTCAAATGATTTAATAAATACATGTGTTATACCTCAAGATGTGTGGGACCTTCAGTTTTTC AAAAGACCAACTTCAATACCCATCTTGTATTTCTTCTCATGCTACTTTACGAGGAAAAGTTCCCATGCTGACCTCCGGGATGTTTTACATCTGAGAAAGA GCCTTTTGAGAGCAACATTGAGTCATCTGAATTGGAAGGGCTGTTCAACATTGAATGAGCGAATGGTTTTGTTCCTACCTAGTGCTATGTATGCACTTTC TGCAGGTTGTGTTCCTTTCACTCAATGCTTTAAAGACGTTCCTCTAGTTTACAGTTCTTTTGATGCCTTTGAGGCATCAGATGACTGTCATAAGTTAGAA GACCCTAAACACCAATGTCTACATGATTATTTGGATTGCTCTATTGAAGTTCTTACCAAAATTGACAACATTTCTAAAGTTCAGGACCCCCAAATGCAAA ATTGTCCACGTGTACGTCTTCCCCGGGAAATAAGTGATCAGCTTCTGCATGAAATGGAAACTGCTATTCTTGGTGCTTTGGCGGAAAAAGAGAATGATGA GAGGCGTTTACCTAATCTGTTCTTTATATGTTCTCTCTTGTCTAACTTACTATATGGTGCTTTTTTCATAAGGAAAATAAATGTTCCATTCCTTTCAAAA TTAAGCCAATACTTGCAAGTGATGCTTGATAATGCTGTCAGAATTATTGAAGAAGACAATGATCTCCAGGCTTTTAATTGTTTAAGTTACGATCCTTCTT GTGATGAAACGAGTTCTCTGGCTGCTTCTATTTGTAGTTTTCTTTCAACTCCGATATTTAACAAATGGACAGATCAAAATATGTTGGATTTTGTCCCATT TGATTTTGGCGAGGTAATACAATCTGTGGAGAGACTCTTGAAAGCATTTGTCAACCTATATGAAGGTTATTCTCAGCATGTGGTGAACCTTCAGTCTGAG CCACTTACGCCAGATGTAGCTGCTATTGACAGTATTCAAAGTTCTTATCCATATGACCATAGTAAAAGTAGGATTGTGGATGTAGAATTGGATGTTAATG ATGACTCCAGAGATGTGGATAGTTTAGCGGTTGGGAAGACAATAGGTAGCAGTGTTTCGTCTTCTGCAGAGAAGTGGAAACTTGGAGTGGTATTTCTTAT TTCCAGTTTTTTCTCTGCTTCACATGTTCTTACATGGGATGTTCTCTTCAAACTAATGGAGAAAGAATCTGATCGTAAGGTGCGTGGAAAAATATTGTAT CATCTCTGTCAACATCCTTATTGGTCCTCTTCTTCAAAGTTTATAGATTTGGTCAATGCAATGAATGATATCATTTTAGAGGAAGTTAGACATAAGCTTT TTTGTGGTGATGTATTGACTTCAACTCATGCTTTACTAGCCAATTTATCTTCTTTGGATGCTGTTGGTAAGGACAAATGTGGCCTTTATTTGAGAGAAGT GGAAACAGAGCAGACAATGATAGAGCGGTTGCTTTTGATGCTTAAAGATACTGATTATCGAGTTCGGTTATTTCTGGCACGGAAGATTAGTGTTCTTTTC CAAACATGGGATGGTCATGATGAGCTTTTTCAGGACATTTGTTTAAACTTTGGTGTTCAATTGGTGCTTTATTCCAAAGTGAAAGTTATCAATGCAAAGG AGGTGCTTGCTGCTGGTCCTCAACCTCAACCTATGATGGAAACTGTGCTAATTACTCTCATGCATCTTGCCTTACATAGTGAGAAGGTCGAGTTGGAGGC TGTTTTCATGATGTGTGTTGTTTCTGCCATTGATCCTTATCATAGGGAATTGGTCTGTGCTGTACTTGACAACCTTTCTAGAGAGCTCCAGTACAAGACT AGAATGAAGTACTTGGAGGAGCTTTTGGGATCGATTCTCTTTTGTTGGGTTGCCTGTGATGTAAGCTTAGTTGCACTTGTTGAGACAAGGCATCTTTTCG TACCTGATGCAGAGCCTGATCATTTCCTCCAGTATTGTTGCCATTGGCTTCTTCCTGCCCTGCTTCTTCATGAAAGCAGTTCTAACCTCAATTGGGTAGC CAAGGTTATTTGTCAACCACTGACAGTTATTGTAAAAAACAACTTCGCTCCGATATTTTCTGTTTGTATGGCTTTACATTGCAGTAATAAACCTGGATCA GAAAGGGGAACCCTTGTGCTTCAGAACTCAATTCTGCATTTTGCTCAGATATCTGAGAATGAACGAGACAAGCTCATAAAGAGACATATGGTGTCTATTG TGAGCTGTATTTTATCCTTGTCCTCTTGTTCATCAGATCCTGTAGTCCCTTTCTTTTCCAATGACACAGTGTCATTTGCAATTAAAACTGTTGTTGATGG ATTTATGGACATGGATGCCAATCATACAAGTGCTGCAGTTGCTGACAAGATCAACATTTTTCGCCCTGATAGAGCTTTCATGTTTTTGGTAGAAATTCAT TATAAAATTGCAGCTGCCTCTCATTACAGGCATAAGTGCCACCGACTGGCTGGAATTGAGGTTCTTATTAGTATTCTTGGTCTGAGAGTCTCTGTTTTAA GCATATGCAAGTAAGATTTTTGCGCAAACCTGAGCTTCATGCATTCAGACCCAATCATCTATACAATTTGGATTCATTTTGGACTGCCTTATTTCTCTGT TTTCATTTTTCTCTCATTAACCAACCTCATACTTTTCTCATAAATTGAGCAAATGCAGTTATCTTTTCAACTTGGTTGGGCCATTGATTGGATGTCATCC TTTACGGGATCAATGTTTCCGTATACTTTCTGCATTGCTACTACGATTAAAAAAAGAATCCATCTACAGATATCATCAGTATGCTCGGGGAACAGCTCCA GTTTCTTGTTTCTAAGTTGGTGGAATGTTGCGTTCCTTCTGAAACTAAAGTATCATGTGATAGCCCTACATCACATGTTCTATCTCTGCTCCACTTGTTA ACTGTGGATTCCGATCCTTCTATGTATGATTATGTCAAAGAGTTGGAGCCATTCCCTGAATTAGAAGTCTTTGATGAGATACGGAGGTTCCACGAAGAAT TGTGCAACACTTACTCTATACGCAATCACTTATTGAAGTTGGTAAAGAGGTCTTGCTACCTTCCACCAAGGATACT BLAST |
| Tissue | pods |
| Gene name | LI_gene_191272; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_305130
| Blastp | Serine/threonine-protein kinase ATM from Arabidopsis with 50.18% of identity |
|---|---|
| Blastx | Serine/threonine-protein kinase ATM from Arabidopsis with 50.18% of identity |
| Eggnog | ataxia telangiectasia mutated(ENOG410XNPY) |
| Kegg | Link to kegg annotations (AT3G48190) |
| CantataDB | Link to cantataDB annotations (CNT0001712) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416968.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |