| Id Trinity | TRINITY_DN52253_c1_g1_i34 |
|---|---|
| Name Transcript | Ll_transcript_305134 |
| Sequence | AGAAATATAGCCTTCCTTGAGGAGCCTAAAACCCTTACATTTCCGCGCCATTTCTGTTCCCCTCTCAAAGCCCTAGCTTCTTCTGCTTCGATCATTTCCT CCATCTTTCAATAATGGCGATTGTCACTTCCAGGGACGTTCAAGAGATCGTAGACAAATTATCTTCTGTTAAAGTTAAAGCTCGCGAAGAAGGGATCAAG TTGTTAAATACTTGGTTAGAAGGAGAAAGATCTTACAGCTTCTGCAAATATCTTGGACTGAATACTGCAAGGCTTAAACCAGATGAAGTTCCTCATTCTG AAACATGGCCCTTTGTTGTTTCTTTACTTATTCAATCCGCATCATTGGAAATATCCTCCAGTAAGCGGAGAAATCCGAAGATGATATATGCAAAGACTCT TAGAGTTGTCGTGCAACGAGCAGAAGATGCTAAGTATTCAGGTAAAATGCTGCCTCTGTCATCTGTGGTTAAACCACTTTTTAGCCATGTTTGGGATGTC CTGAGCAACATTCCAAGCTTTCACTCAGAGTATGGGATAATCCTCCGGCATCTATTGGCTGTTAGGGATTATAGTTTCCAGATGAGGAAGCGCATTTACT GCAGCCTGGTGTTTCTGTACATTGAGAAGGTTGAAGTGAGTTTGGATGGGAAAAATATTAATCAGTGTACTTCCAAGGAGGAAGTCTTCCGCTATGTCTT GACGCTTCATTCGCTTTTGGAAAATCCTCCTGGAGACTACCCTGATAATCTAAGAGAAGATATTGTTAAGGGGTTTGTTAGTATCTGTTCATTCATCAGG GAGGAGGGAAAGATATCACGCAAGCTTATTGAGTGTATTAATACATATTTGTTAAATGATGGTCCAAATTTGGGCCATCAGTTGTTGGAAATCCATAATG CCATGCAACAGTTTGTGTTCTGCTATTGGCTGACAACACATGATCGGCTTCTTAAGGATTCACTTATGCTCTATGCAAAGATACAGTTAAATTTAATGAG GGGTGCCACAGATAGATGTTTATTGGTAGAACAGCTTTTAGATGTGGTTTGTAAAGATCTTGATCAAGGTAGCATGTCTGGCACTTCCATGCCCCGGAGT GATGGAAACAAAGATGATAAACTTGGAGCTTTGAGTAGCTCACAATCTAGCTTGGTGGAACTTGCATCAGTTCTATTTTATAGGGCATGCCTTAATACAA CCAGAGCCTTATTAAGCGAAAAACGGGCCAAGAGGGAGCCTGCTGCTGTACTCCTGAGGGAGGCACTCATGAAAGGCAAATGGCTATGGACTGCTGCATT TTGTTTTCTCACTCGAAACTACCATACTCGCATGCGCAAAGATCTGTTTCTCTACTGGTTTGAAGGCATATGGATGAGCTTTGACAGCATACTGAATTCT GCAAATGTGGAGCATGCCTATGATGGATTGTTGTGGACTCTGCGGAGTTTGCAGGAACTTTCTTCTGTTCTGTTGCTTCCAAATTCAGTGATGGAGATAT CGTCAATGTCAGTTTCTACCTTAAATGAGTTCATCAATGGCTGGCAACTAGTATGGAGTACTGTAGTGCATGGGTTGCCGATTTTCAGCATTATAACCAC TCTTGTGGAAGCTGCTTTGGTGCTTCTTAGCAATATAACCTCAAATGATTTAATAAATACATGTGTTATACCTCAAGATGTGTGGGACCTTCAGTTTTTC AAAAGACCAACTTCAATACCCATCTTGTATTTCTTCTCATGCTACTTTACGAGGAAAAGTTCCCATGGATCAGTTTTTGGTTTGCTAATTTAATTCAACT GAGCCCCTGTCAAGTTTATTCCAACCATGAGTGCGGGGTGGGGTTGATTTTAGGTGCCTTTATCTTATTCAAATACTCTCAGCTGACCTCCGGGATGTTT TACATCTGAGAAAGAGCCTTTTGAGAGCAACATTGAGTCATCTGAATTGGAAGGGCTGTTCAACATTGAATGAGCGAATGGTTTTGTTCCTACCTAGTGC TATGTATGCACTTTCTGCAGGTTGTGTTCCTTTCACTCAATGCTTTAAAGACGTTCCTCTAGTTTACAGTTCTTTTGATGCCTTTGAGGCATCAGATGAC TGTCATAAGTTAGAAGACCCTAAACACCAATGTCTACATGATTATTTGGATTGCTCTATTGAAGTTCTTACCAAAATTGACAACATTTCTAAAGTTCAGG ACCCCCAAATGCAAAATTGTCCACGTGTACGTCTTCCCCGGGAAATAAGTGATCAGCTTCTGCATGAAATGGAAACTGCTATTCTTGGTGCTTTGGCGGA AAAAGAGAATGATGAGAGGCGTTTACCTAATCTGTTCTTTATATGTTCTCTCTTGTCTAACTTACTATATGGTGCTTTTTTCATAAGGAAAATAAATGTT CCATTCCTTTCAAAATTAAGCCAATACTTGCAAGTGATGCTTGATAATGCTGTCAGAATTATTGAAGAAGACAATGATCTCCAGGCTTTTAATTGTTTAA GTTACGATCCTTCTTGTGATGAAACGAGTTCTCTGGCTGCTTCTATTTGTAGTTTTCTTTCAACTCCGATATTTAACAAATGGACAGATCAAAATATGTT GGATTTTGTCCCATTTGATTTTGGCGAGGTAATACAATCTGTGGAGAGACTCTTGAAAGCATTTGTCAACCTATATGAAGGTTATTCTCAGCATGTGGTG AACCTTCAGTCTGAGCCACTTACGCCAGATGTAGCTGCTATTGACAGTATTCAAAGTTCTTATCCATATGACCATAGTAAAAGTAGGATTGTGGATGTAG AATTGGATGTTAATGATGACTCCAGAGATGTGGATAGTTTAGCGGTTGGGAAGACAATAGGTAGCAGTGTTTCGTCTTCTGCAGAGAAGTGGAAACTTGG AGTGGTATTTCTTATTTCCAGTTTTTTCTCTGCTTCACATGTTCTTACATGGGATGTTCTCTTCAAACTAATGGAGAAAGAATCTGATCGTAAGGTGCGT GGAAAAATATTGTATCATCTCTGTCAACATCCTTATTGGTCCTCTTCTTCAAAGTTTATAGATTTGGTCAATGCAATGAATGATATCATTTTAGAGGAAG TTAGACATAAGCTTTTTTGTGGTGATGTATTGACTTCAACTCATGCTTTACTAGCCAATTTATCTTCTTTGGATGCTGTTGGTAAGGACAAATGTGGCCT TTATTTGAGAGAAGTGGAAACAGAGCAGTGCTTTCTGTTACTTGGAAATGTGGTGAGTAAACTTTCAGAATTTGATATCGATTGGTTTGGACGAGTGAAG CTGATTGATTGCATCTGCCATTTTGTGTTACTCAATCCTCAAATTGGTCAGACAATGATAGAGCGGTTGCTTTTGATGCTTAAAGATACTGATTATCGAG TTCGGTTATTTCTGGCACGGAAGATTAGTGTTCTTTTCCAAACATGGGATGGTCATGATGAGCTTTTTCAGGACATTTGTTTAAACTTTGGTGTTCAATT GGTGCTTTATTCCAAAGTGAAAGTTATCAATGCAAAGGAGGTGCTTGCTGCTGGTCCTCAACCTCAACCTATGATGGAAACTGTGCTAATTACTCTCATG CATCTTGCCTTACATAGTGAGAAGGTCGAGTTGGAGGCTGTTTTCATGATGTGTGTTGTTTCTGCCATTGATCCTTATCATAGGGAATTGGTCTGTGCTG TACTTGACAACCTTTCTAGAGAGCTCCAGTACAAGACTAGAATGAAGTACTTGGAGGAGCTTTTGGGATCGATTCTCTTTTGTTGGGTTGCCTGTGATGT AAGCTTAGTTGCACTTGTTGAGACAAGGCATCTTTTCGTACCTGATGCAGAGCCTGATCATTTCCTCCAGTATTGTTGCCATTGGCTTCTTCCTGCCCTG CTTCTTCATGAAAGCAGTTCTAACCTCAATTGGGTAGCCAAGGTTATTTGTCAACCACTGACAGTTATTGTAAAAAACAACTTCGCTCCGATATTTTCTG TTTGTATGGCTTTACATTGCAGTAATAAACCTGGATCAGAAAGGGGAACCCTTGTGCTTCAGAACTCAATTCTGCATTTTGCTCAGATATCTGAGAATGA ACGAGACAAGCTCATAAAGAGACATATGGTGTCTATTGTGAGCTGTATTTTATCCTTGTCCTCTTGTTCATCAGATCCTGTAGTCCCTTTCTTTTCCAAT GACACAGTGTCATTTGCAATTAAAACTGTTGTTGATGGATTTATGGACATGGATGCCAATCATACAAGTGCTGCAGTTGCTGACAAGATCAACATTTTTC GCCCTGATAGAGCTTTCATGTTTTTGGTAGAAATTCATTATAAAATTGCAGCTGCCTCTCATTACAGGCATAAGTGCCACCGACTGGCTGGAATTGAGGT TCTTATTAGTATTCTTGGTCTGAGAGTCTCTGTTTTAAGCATATGCAATTATCTTTTCAACTTGGTTGGGCCATTGATTGGATGTCATCCTTTACGGGAT CAATGTTTCCGTATACTTTCTGCATTGCTACTACGATTAAAAAAGAATCCATCTACAGATATCATCAGTATGCTCGGGGAACAGCTCCAGTTTCTTGTTT CTAAGTTGGTGGAATGTTGCGTTCCTTCTGAAACTAAAGTATCATGTGATAGCCCTACATCACATGTTCTATCTCTGCTCCACTTGTTAACTGTGGATTC CGATCCTTCTATGTATGATTATGTCAAAGAGTTGGAGCCATTCCCTGAATTAGAAGTCTTTGATGAGATACGGAGGTTCCACGAAGAATTGTGCAACACT TACTCTATACGCAATCACTTATTGAAGTTGGTAAAGAGGTCTTGCTACCTTCCACCAAGGATACTTTTGTCAAGTCTCCAGGCATTGCATAAGAAGTTAA TGACTGATGAAGCCATTCAGAGAGGAGGGAAAGCGGACAGCATATATTGGCATGACGATCATGAAATTGTGCACGCTGTCTGGACACTTGTTCACATGTG TGGCTCAAATGATGCAAGTGGTGTTAGAGAATTTGTGTCGGATTTCATTTCTCGGGTTGGTGCAGGGGACCCACACTCTGTTGTTTTCCATCTTCCTGGC GAAAGTAATCATATTCGTGTTGGTAAATCTATTGATACCACCTGTGCAATGGAAATCAGTTCAAACATGGACACTTGCATTTCTGAAGAACTTTTGGTTG TCCTTCTGAAAATTCTAAAGAAGTATCTGATGGATGACTCTGTGAAAATTGTTGATATGGCATCACAAACACTCCGTGGAATACTTTCAACCGAACGAGG CCAAAGTGCTTTACAGTCATTTGATTCTTATCAGAGATCTCTTATTGAGGTGCATTCGAAGGGTGTTAATATTGGACTTGTGGAAAATTTCCTTTTGGAC CTGGAAAGGAAGTCGAAAGTGGAAGCATTTTCATTGGAGAAGTCTGATGTGTGGGTCACACATGGTAAATCTTTTGAGAAGTGGATTTGTCCGTTGGTGT ATTCACTTATTGTCTACTGCAATGACGTGATACTAAGATTATGTCAAGATATTGTATTGTTTAAAGCTGAAGTTGCTGAGCTTCTTTTACCAAGTATTTT TGTTAACATTGCTGCAAGGAAGGACTTGGAGATTGATCTTCACAAATTATTTTGTCTGCAGTTGAAGGAGCATATATTCACAGAATCGAATAAGCTGACC AAATCCATTCAAGTGGTGTTGAATTGCCTCAATGAACTTCGCATATGTAATGTCATGGAAAGATCATCTGTATCATCAAAGCGTGAAACATCCAAGAACT CAAAACCATCAAGTTATGGCTCAAAAACCCGGTCTACTCCTGCAAAGGCAAGAGAATCTGCTGTTGTTTCAAGTGCCTTGGCAAAGTCACCGTTCTCCTG GGAGAAAGTGTATTGGCTTTCCATTGATTATCTTCTTGTCGCCAAGTCAGCAGTTAGTTGTGGATCATATTTTACTTCAATGCTGTATGTGGAACATTGG TGTGAGGAGCACTTTAAAGGTATGACAGTTGGAGGTCCAGATTTCTCCCACAATGAAATGTTGCCAGATCATATTGAAGTACTTGTCTCGGCAGTCACTA GAATCAATGAACCTGATAGCTTATATGGAATCCTTCAGTCACACAAGTTAACGTCTCAAGTAATCACCATGGAGCATGAAGGAAACTGGGGAAAGGCCCT TGAGTATTATGATTTGCAAGTGCGATCAGGTATCTCAGTTCAGAAGGATGGCAGTGCTAGGAATTTGTCATTGGAAAAAACTGGAGCAGCAAATCTTTCA TCTTTTGCAACGGAGGTAGATGAGATGAGGCAAAGTAGACCTTACAAAGGGTTGATTAGATCATTACAGCAGATTGGTTGCACACATGTGCTAGATTTGT ATTGCCAAGGGTTGACATCAAGCAAGGACCAGCTCCAGCATGATTTAGAGTTTGCTGAATTGCAGTTTGAGTCTGCCTGGCGTGCTGGGAACTGGGATTT CTCCTTACCACAAGTGGGAGCTAGTTTCCCTCCAACTCAGAATATTAAATATAATCATTTCAATGAAAATTTGCACAGTTGTTTAAGGTCGCTCCAGGAG GGTGATTTTTGTGATTTCCAACTTAAACTAAGAGATTCAAAGCAGGAGCTTCTGTGGTCTGTTTCTCATGCAAGTGAAGAAAGCACTGAGTACATTTACC TGTCTATCATCAAACTCCAGATGCTTCATCATCTTGGCATGGCATGGGATTTACGCTGGAGGAATTTTGAAGATCATAACACAAAGTTCTGTCTTCAGAA GCAAAACGTGTCTCTTGAGCCTGTGATACCTTCCATTGAACAGTTGTCGTGGCTGGATATGGATTGGTTCTCAATTTTGCAAAGGATGCAACTGCATATG AATTTGCTAGAGCCATTTATAGCATTTCGACGAGTACTACTTCAAATTTTAAGTTGTAAAGATTGTATGCTGCAACATCTTCTGCAGTCTTCCTCCACAC TTCGTAAGGGAACTAGATTCTCTCAAGCAGCTGCTGCTTTGCATGAATTTAAGTTCCTTTCTGTTGAAACCAAAGGGCCATCCTCATCCTTATATTGGCA GGGAAGGCTTGAAGAGGCAAAGCTTTTTCGTGCTCAAGGTCAAAATGAGATGGCTATCAACCTTGCAATATATATATCACAAAATTCTCATTGTAGTGAG GAGGCTTCAGATGTATATCGGTTGATTGGCAAGTGGCTGGCAGAAACCAGATCTAGCAACTCAAGAACAATTTTGGAGAAGTATTTGAAACCTGCAGTCT CTGTTGCTGAAGATATGAACACTACAGACAAAAAGGCCATGGAAAGGAAATGTCAAACTAATTTTCATCTTGCACACTATGCCGATGCTCTATTTAGGAG CCATGAAGAAAGACTTAACTCTAATGAGTGGCAAGCAGCAATGCGCTTAAGGAAACATAAGACCATAGAGTTGGAAGCACTCATAAAACGGTTAAGGAGT TCAACAAAGGGGGAGAAAACCGACTACTCCATGAAAATTCAAGAACTACAAAAGCAAGTAGCTATGGACAAGGAAGAATCCCAGAAATTACAGGATGACC GGGACAATCTTCTTAGTTTGGCATTGGAGGGATACAAACGTTGTTTAGTCATAGGGGACAAGTATGATGTGAGAGTGGTGTTTCGAATAGTTTCGTTGTG GTTCAGTCTTTCTTCTCGAAAAAATATTGTAAATAGCATGCTTAGCACTATTGATGAGGTTCAATCTTTTAAATTTATACCTTTAGTGTACCAAATTGCC TCTAGAATGGGAAGCTCAAAGGATGGTCAGGGACCTCTTAATTTCCAGTTTGCGTTGGTTTGTCTAGTGAAGAAAATGGCCATTGATCATCCATACCATA CAACACTTCAACTTCTGGCTCTGGCAAATGGTGACCGTATCAAGGGCAATCAGCGTAGTAGAAGTTCGTTTGTTGTTGATATGGACAAAAAACATGCAGC AGAAAATCTTCTAAATGAGTTGTCATCTTATCATGGAGCTATCATACGACAAATGAAGCAAATGGTAGAGATTTATATCAAACTTGCTGAGATGGAAACA AAGAGAGAGGATACCAATAGAAGGGTGACACTACCAAGGGACTTGCGTAATCTCCCAGCACTAGAACTTGTGCCTGTAGTGACAGCTCCTGTTTCAGTTG ACCCAGGTTGTCAGTATAATGAAGGAACTTTTCCTCATTTCAAAGGATTAGCAGATTCAGTTATGATAATGAACGGTATAAATGCCCCAAAAGTGGTTGA GTGCTTGGGTTCAGATGGTTGTAGATATCGGCAACTTGCAAAATCTGGAAATGATGATCTAAGACAGGATGCCGTAATGGAACAATTCTTTGGTTTAGTA AACACATTCCTGAGGAATCATCAAGATACCCGGAAAAGAAGGCTAGGAGTACGCACTTACAAGGTTGTTCCTTTTACTCCAAGTGCTGGTGTTCTTGAGT GGGTTAATGGCACTCTTCCTCTAGGTGAATATCTTATAGGAAGCTTGAGAAACGGAGGTGCTCATGGTCGCTATGGAATCGGGGATTGGTCGTTTCTCAA ATGCCGAGAGCACATGGCAAATGAAAGGGACAAGCGCAAAGCCTTCCAGGAAGTTTGCAGGAATTTCAGGCCTGTTATGCATTACTTTTTCTTGGAAAGG TTTTTACAACCAGCAGAGTGGTTTGAGAAGAGACTTGCTTACACAAGAAGCGTCGCTGCAAGCTCTATGGTTGGTTATATAGTTGGACTTGGAGATCGAC ACTCCATGAATATTTTAGTTGACCAGGCCACTGCAGAGGTTGTTCACATAGATCTTGGTGTTGCTTTTGAACAAGGATTGATGCTCAAGACCCCGGAACG GGTTCCTTTTAGGCTTACAAGAGACGTAATTGATGGAATGGGTGTTACTGGAGTAGAGGGGGTTTTCCGAAGATGTTGCGAGGAAACACTATCAGTAATG CGGACAAACAAAGAAGCATTGCTAACTATAGTGGAAGTTTTTATCCATGATCCTCTTTATAAGTGGGCTCTATCCCCTCTGAAAGCTTTGCAACGCCAAA AGGATATGGATGATGATTTGGTTACAAGCTTGGAAGATCCTCAAAATGATTATGAAGGAAATAAGGATGCCGCACGTGCACTTCTACGCGTCAAGCAAAA GCTAGATGGATATGAAGAAGGTGAAATGCGCAGCATCCACGGACAGGTCCAACAACTCATCCAAGATGCAATAGATTCTGAGCGGTTGTGTCAAATGTTT CCTGGTTGGGGAGCTTGGTTATAGTGAGAGCTTCTTGGTGCATTTGAATCATATTGTATAGGTGCCTTGTATTTTCTTTATTCTATCTTCAAACTCTTGT GTGTTCATGATACTTGAATGGGAAATTATTTTGTACATTCCAAATTCTTAGTTTAATTCCAATGAATTGGGAAATAATCTGTTATCTATTTTCAGCTCAG ATTTCTATAAATTATCAATGGCAAGTGTAAAAAGTTAAAAACAATATTTGCTGCTTATTATTTCATGTCACATAATTTGATGATCATGTTCATCAGCAAA CAAGTCAGCATGATCTTTGCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_191272; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_305134
| Blastp | Serine/threonine-protein kinase ATM from Arabidopsis with 58.81% of identity |
|---|---|
| Blastx | Serine/threonine-protein kinase ATM from Arabidopsis with 58.68% of identity |
| Eggnog | ataxia telangiectasia mutated(ENOG410XNPY) |
| Kegg | Link to kegg annotations (AT3G48190) |
| CantataDB | Link to cantataDB annotations (CNT0001712) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416968.1) |
| Pfam | Phosphatidylinositol 3- and 4-kinase (PF00454.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |