Ll_transcript_306730

• Id Trinity: TRINITY_DN52258_c1_g1_i5
• Name Transcript: Ll_transcript_306730
• Sequence: AAAAATTAAAATTCTGACATTCTAAAAAAAGAAAAAAAAATGACGTACTTCTAAAAAATTAAAATTCTGACATTCTAAAAAAAGAAAAAAAAATGACGTA CTTCTAAAAAATTAAAATTCTGACATTCTGACAGGCGTGAGTAATTAATCCTCTGACCAGATCAACTCGAATTGAACTTCTTTCTATTCTTCGAACTTCG ATCTTCACTTCAACTCTCATAGTTCCTTTTCGCTATCTCTCAAATTTGCATTCTATAGCAGTTGTATTTAATGGAACTATTGCTATAAGTGACAGTATTA TTGTGTAAAGTATGGGAACTGAAAACCCCGATCGTCCAACTTTCCCTTTAAGACCACACACTGTCACACCTTTTACACCAACTGGATCACAACCCCCTCT TCTCCGCCCCACTCCTCCATTCTCCTCCGCAACCGTATTGCCTTTTAGACCTCCGCCACCGTTCCAAATTAATTATCCCTCTGTTCCTCCTTCTCCTCCG ATTACATTTAATGCCCCACCCACTCATGCACCTTCCCACCGTTTTCCAACCCCACCGCAATTTCCATCCACCGTTCAAACACAACCACCGCCACGTGTTC CACCCTTTGGACAGCCATCATTTCAACAAACTCACCCTCAGCCACAAACACAAACACCTTTTGCTCCGAATGTTCCTCGTCCCGTGCTTCACCCGTCTTT TCCTGGATATGCTGCTACACAAACTGGTGCAGAACTGCAAGCTCCACCTGTTCATTCTTCTCTAGGGGTTTATGCACCTGTCCCAGCGTCTTCGCCTTTT TTATCTCGTCAACGAGGTAATGTTCTGCCGCCACCAGTGGCTGCTCCGTCAGGCGTCCAACCGCGAATGCAGCAGCCCGGATATGGGCCGCCTACAGGTG TTGTCCAGGGCTTGATAGAAGACTTCAGTTCATTCTCAATTCAAACTCGCCCTGGTCTCGCGGATCCATCGGTTGATACTAATGAATTGCCAAGGCCACT GGATGGTGATGTGGAGTCGGATTCGTTGGCTGAGATGTTTCCCATGAATTGCAATCCCAGGTATATGCGATTTACGACCAATGCAATACCGAGCTCCCAG TCCTTAGCTTCTAGGTGGCATCTTCCTCTTGGAGCAGTTGTATGTCCGCTTGCAACACCTCCTGATGGGGATGAGGTGACTGTAGTTAATTTTGCTCTGG GTGGTGTAGTACGCTGTAGGAGATGTCGTACATATGTCAATCCATATATTACATTTACAGATGGTGGAAGAAAGTACCGCTGCAACATATGTGCCTTGCT TAATGAAGTTCCTAGTGAATATTATGCACAATTAGATGCCACTGGCAAAAGGGTTGATTTGAATCAACGACCTGAGCTTACAAAGGGTACCGTGGAGTTT GTTGCCTCAGCAGAATATATGGCGCGGCCTCCTATGCCTCCAGTATATTTCTTCCTCATTGATGTTTCCATTTCTGCAGTTAGAAGTGGAATGATTGAGG TTGTGGCTCAAACAATCAGGTCATGCTTAGACGAGCTGCCCGGTTTTCCACGAACACAAATAGGGTTTGCAACTTTTGACAGCACAATACATTTTTATAA TATGAAGTCATCCTTGACTCAGCCTCAGATGTTGGTAGTCTCAGATCTGGATGACATATTTGTTCCACTGCCAGATGATCTCCTTGTCAACTTATCAGAG TCAAGAAATGTGGTGGAAATCTTTCTAGATAGTCTACCATCCATGTTCCAAGACAATGTGAATCTCGAATCTGCTTTTGGTCCTGCACTTAAGGCTGCAT TTATGATCATGAGCCACCTTGGAGGGAAATTGTTAATTTTTCAAAACACGCTGCCATCTCTCGGCGTTGGTCGCTTGAAATTACGTGAAGATGATTCTCG CATTTATGGCACCGATAAAGAACATGTGTTAAGATTGCCAGAAGATCCATTTTACAAGCAAATGGCTGCTGAGTTTTCTAAATACCAAATCTCAGTCAAT GTGTATGCATTCAGTGATAAGTACACTGACATAGCCTCCTTAGGAACTCTGGCAAAGTATACTGCTGGTCAAGTGTATTTCTATCCAGCTTTCCAATCAG TCATTCATGGGGAGAAACTGAGAAGTGAATTAAGGAGAGACCTTACCAGAGAAGTTGTCTGGGAAGCTGTAATGCGAATTAGATGTGCAAAAGGTGTCCG TTTCACAACTTATCATGGAAACTTTATGCTAACATCCACTGATTTGTTAGCACTTCCAGCTGTTGATTGTGATAAAGCCTTTGCCATGCAGTTATCTCTT GATGAAGCATTGTTGACAACTCAGACAATGTATTTCCAAGTTGTATTGTTATATACTGCATCGTGCGGAGAAAGGCGCATCAGAATACACTCAGCAGCAG TTCCAGTAGTTACAGACTTGGGAGAGATGTATCGCCTGGCTGATACCGGTGCAATTGCATCTTTGTTTAGCAGGATAGCAATTGAGAAAGCGTTGTCCCA TAAACTAGAAGAAGCACGAGGTGTTGTGCAACTAAGAATCGTGAAAGCCCTCAGAGAATATAGAAATCTGCATGCAGTGCAACACCGCTTGGCCAACAGA ATGATATATCCCGATTCATTGAAGTTCCTACCCTTGTATGGATTAGCTCTCTGTAGATCAAAACCTCTCCGTGGAGGGCATGGAGATGTTCCACTGGATG AACGATGTGCAGTTGGACATACAATGATGACTCTACCAATAAAAAGGTTGTTGAAACTTCTATATCCTAGTTTAATTCGACTTGATGAACATCTTCTGAA GGCTGGTGACTTGAAAAGCATTGATAGAAGGTTACCTTTGAGTAGGGAGAGCTTGGATTCTAGGGCCCTTTATCTGTATGATGATGGCTTTGGGTTCACC ATATGGTTTGGTAGAGTGATTCCACCTGATATAGCTAAAAACTTACTTGGAATAGACTTTGAAGCAGAGTGTAAGGTTTCTCTTAATGAGCAAATTAACG AAATGTCAAAGGAACTGATGAAGGTACTTGAGAAATTTAGAAATACCGACCGATCATATTACCAGCTGTCTCACCTTGTGAGACAAGGTGAACAACCCAG AGAAGGATTACTTCTTGCAAACCTCCTTGAGGACCAGATGGGTAGTAATAGTGGATATGCTGATTGGATGGTAAAGATTTCCAGACAAGTGCAACAATCA TAATATATAGGCTTGTTTGTTACCTGTCTCATAACTGAAGCAAAGACCATTTCTTTCTACCTTGGAAATAAACTGAACCTCAGCTTGGGGATTCATCATG TAGCGTGGATGCTTTATTAGGCGACTTTTAGTCCATCATGCCCTGTATTAATTAGTGGAACTGTATCTTTTGTGAATAGATTCGAAGTGTATTCCTGTCT TGATATAGAGAATAAAAACATTATTTAAGATAATTTGTCGTTTTCTATGGTCATTTTCCTTAATGAAATGAGAAAAAGAAAAGATGGCATGTCAAATCTG TCTACTAATTCTTGAATTGTTCGGTG
• Tissue: pods
• Gene name: LI_gene_191313;
• Additional information: details;

Expression of Ll_transcript_306730

FPKM

• PAB: 4.9
• PNAB: 4.1
• PS1: 5.8
• PS2: 3.9
• PS3: 3.8
• PW1: 5.4
• PW2: 2.5
• PW3: 2.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_306730

• Blastp: Protein transport protein Sec24-like At3g07100 from Arabidopsis with 59.58% of identity
• Blastx: Protein transport protein Sec24-like At3g07100 from Arabidopsis with 67.97% of identity
• Eggnog: SEC24 family, member(COG5028)
• Kegg: Link to kegg annotations (AT3G07100)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429006.1)
• Pfam: Sec23/Sec24 zinc finger (PF04810.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;