Id Trinity | TRINITY_DN52258_c1_g1_i9 |
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Name Transcript | Ll_transcript_306735 |
Sequence | AAAAATTAAAATTCTGACATTCTAAAAAAAGAAAAAAAAATGACGTACTTCTAAAAAATTAAAATTCTGACATTCTAAAAAAAGAAAAAAAAATGACGTA CTTCTAAAAAATTAAAATTCTGACATTCTGACAGGCGTGAGTAATTAATCCTCTGACCAGATCAACTCGAATTGAACTTCTTTCTATTCTTCGAACTTCG ATCTTCACTTCAACTCTCATAGTTCCTTTTCGCTATCTCTCAAATTTGCATTCTATAGCAGTTGTATTTAATGGAACTATTGCTATAAGTGACAGTATTA TTGTGTAAAGTATGGGAACTGAAAACCCCGATCGTCCAACTTTCCCTTTAAGACCACACACTGTCACACCTTTTACACCAACTGGATCACAACCCCCTCT TCTCCGCCCCACTCCTCCATTCTCCTCCGCAACCGTATTGCCTTTTAGACCTCCGCCACCGTTCCAAATTAATTATCCCTCTGTTCCTCCTTCTCCTCCG ATTACATTTAATGCCCCACCCACTCATGCACCTTCCCACCGTTTTCCAACCCCACCGCAATTTCCATCCACCGTTCAAACACAACCACCGCCACGTGTTC CACCCTTTGGACAGCCATCATTTCAACAAACTCACCCTCAGCCACAAACACAAACACCTTTTGCTCCGAATGTTCCTCGTCCCGTGCTTCACCCGTCTTT TCCTGGATATGCTGCTACACAAACTGGTGCAGAACTGCAAGCTCCACCTGTTCATTCTTCTCTAGGGGTTTATGCACCTGTCCCAGCGTCTTCGCCTTTT TTATCTCGTCAACGAGGTAATGTTCTGCCGCCACCAGTGGCTGCTCCGTCAGGCGTCCAACCGCGAATGCAGCAGCCCGGATATGGGCCGCCTACAGGTG TTGTCCAGGGCTTGATAGAAGACTTCAGTTCATTCTCAATTCAAACTCGCCCTGGTCTCGCGGATCCATCGGTTGATACTAATGAATTGCCAAGGCCACT GGATGGTGATGTGGAGTCGGATTCGTTGGCTGAGATGTTTCCCATGAATTGCAATCCCAGGTATATGCGATTTACGACCAATGCAATACCGAGCTCCCAG TCCTTAGCTTCTAGGTGGCATCTTCCTCTTGGAGCAGTTGTATGTCCGCTTGCAACACCTCCTGATGGGGATGAGGTGACTGTAGTTAATTTTGCTCTGG GTGGTGTAGTACGCTGTAGGAGATGTCGTACATATGTCAATCCATATATTACATTTACAGATGGTGGAAGAAAGTACCGCTGCAACATATGTGCCTTGCT TAATGAAGTTCCTAGTGAATATTATGCACAATTAGATGCCACTGGCAAAAGGGTTGATTTGAATCAACGACCTGAGCTTACAAAGGGTACCGTGGAGTTT GTTGCCTCAGCAGAATATATGGCGCGGCCTCCTATGCCTCCAGTATATTTCTTCCTCATTGATGTTTCCATTTCTGCAGTTAGAAGTGGAATGATTGAGG TTGTGGCTCAAACAATCAGGTCATGCTTAGACGAGCTGCCCGGTTTTCCACGAACACAAATAGGGTTTGCAACTTTTGACAGCACAATACATTTTTATAA TATGAAGTCATCCTTGACTCAGCCTCAGATGTTGGTAGTCTCAGATCTGGATGACATATTTGTTCCACTGCCAGATGATCTCCTTGTCAACTTATCAGAG TCAAGAAATGTGGTGGAAATCTTTCTAGATAGTCTACCATCCATGTTCCAAGACAATGTGAATCTCGAATCTGCTTTTGGTCCTGCACTTAAGGCTGCAT TTATGATCATGGTAAGTTAGTCTCTTCTTTAACTTGTACTTGTTTTTTATTTCTTTATTTCCTATGCTACTTTCAGTTTTCGTTAATGAGCTTTCTTACA CCCGATGGTTTGGTTATGATTTTCTAATAATCGAAATAGTGGTGCACATGATTTAAAATTATAGTTTCTGCAGTAAGAATGAGCAGATAGATGAACATTT CTTTGGGATTGCAGTCGGGGTAAGTTACATGAGATGTCATTTTCTATTTTAGATTTCTTTGTGTTCGAGGTATGGATTCTTTTAATCTAATTCTCAGAAA TCTTACAAACATGACAGTTAGAATTGGAAGATCCAATTAAAAGTACTGGAACCATGGTTTCCAGAAGTTAAAGGGCTGTCCACTTTGAATTTGTGGAATT TCAATACATGTTTTCCAGTGTGTTTAACTTGTCCCGTTTTCTTTTGCATTAGTTTGTTGTGACCTTTTCGCACCTCTTCATACAGAGCCACCTTGGAGGG AAATTGTTAATTTTTCAAAACACGCTGCCATCTCTCGGCGTTGGTCGCTTGAAATTACGTGAAGATGATTCTCGCATTTATGGCACCGATAAAGAACATG TGTTAAGATTGCCAGAAGATCCATTTTACAAGCAAATGGCTGCTGAGTTTTCTAAATACCAAATCTCAGTCAATGTGTATGCATTCAGTGATAAGTACAC TGACATAGCCTCCTTAGGAACTCTGGCAAAGTATACTGCTGGTCAAGTGTATTTCTATCCAGCTTTCCAATCAGTCATTCATGGGGAGAAACTGAGAAGT GAATTAAGGAGAGACCTTACCAGAGAAGTTGTCTGGGAAGCTGTAATGCGAATTAGATGTGCAAAAGGTGTCCGTTTCACAACTTATCATGGAAACTTTA TGCTAACATCCACTGATTTGTTAGCACTTCCAGCTGTTGATTGTGATAAAGCCTTTGCCATGCAGTTATCTCTTGATGAAGCATTGTTGACAACTCAGAC AATGTATTTCCAAGTTGTATTGTTATATACTGCATCGTGCGGAGAAAGGCGCATCAGAATACACTCAGCAGCAGTTCCAGTAGTTACAGACTTGGGAGAG ATGTATCGCCTGGCTGATACCGGTGCAATTGCATCTTTGTTTAGCAGGATAGCAATTGAGAAAGCGTTGTCCCATAAACTAGAAGAAGCACGAGGTGTTG TGCAACTAAGAATCGTGAAAGCCCTCAGAGAATATAGAAATCTGCATGCAGTGCAACACCGCTTGGCCAACAGAATGATATATCCCGATTCATTGAAGTT CCTACCCTTGTATGGATTAGCTCTCTGTAGATCAAAACCTCTCCGTGGAGGGCATGGAGATGTTCCACTGGATGAACGATGTGCAGTTGGACATACAATG ATGACTCTACCAATAAAAAGGCTGGTGACTTGAAAAGCATTGATAGAAGGTTACCTTTGAGTAGGGAGAGCTTGGATTCTAGGGCCCTTTATCTGTATGA TGATGGCTTTGGGTTCACCATATGGTTTGGTAGAGTGATTCCACCTGATATAGCTAAAAACTTACTTGGAATAGACTTTGAAGCAGAGTGTAAGGTTTCT CTTAATGAGCAAATTAACGAAATGTCAAAGGAACTGATGAAGGTACTTGAGAAATTTAGAAATACCGACCGATCATATTACCAGCTGTCTCACCTTGTGA GACAAGGTGAACAACCCAGAGAAGGATTACTTCTTGCAAACCTCCTTGAGGACCAGATGGGTAGTAATAGTGGATATGCTGATTGGATGGTAAAGATTTC CAGACAAGTGCAACAATCATAATATATAGGCTTGTTTGTTACCTGTCTCATAACTGAAGCAAAGACCATTTCTTTCTACCTTGGAAATAAACTGAACCTC AGCTTGGGGATTCATCATGTAGCGTGGATGCTTTATTAGGCGACTTTTAGTCCATCATGCCCTGTATTAATTAGTGGAACTGTATCTTTTGTGAATAGAT TCGAAGTGTATTCCTGTCTTGATATAGAGAATAAAAACATTATTTAAGATAATTTGTCGTTTTCTATGGTCATTTTCCTTAATGAAATGAGAAAAAGAAA AGATGGCATGTCAAATCTGTCTACTAATTCTTGAATTGTTCGGTG BLAST |
Tissue | pods |
Gene name | LI_gene_191313; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_306735
Blastp | Protein transport protein Sec24-like At3g07100 from Arabidopsis with 51.11% of identity |
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Blastx | Protein transport protein Sec24-like At3g07100 from Arabidopsis with 74.2% of identity |
Eggnog | SEC24 family, member(COG5028) |
Kegg | Link to kegg annotations (AT3G07100) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429006.1) |
Pfam | Sec23/Sec24 zinc finger (PF04810.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |