Ll_transcript_307255

• Id Trinity: TRINITY_DN52260_c2_g1_i2
• Name Transcript: Ll_transcript_307255
• Sequence: GTTACATGTTAACAGGATTTTCTGAGACAGTGTTCTTAGTAGGTATTTTGCACCCCAAATGCAACCTGCACTCTCTCAACCTGCAAAGCAAATGTATTCA CTAACAAGATTGAGACTAACATGTTCTACCCCTCAACGCTTTTCACCCTTTCTTCTTTACCATTCAAATTCCCTCCACTTATCTTACATGCAAATTTCTC AAAACTTCTATGACTCTTTCAAGCATTGTTCCTCTCTCAAATCCAAACCCATCGCTCAAAAACTCCACGCCCAACTCATTCTCTCCGGCTTAGACTCCTC TCTTTTCTTGCACAACAATCTACTCCTCATGTACTCCAAATGCGGCTTATTACCCGAAGCTCACCGCCTTTTCCTCGAATCAGATAACCGCAATGTCATC ACTTGGAACACAATTATCCATGCCTTAGTTGATTCGGGCCAAATCGATCAGGCGCGACAACTGTTCGATGAAATGCCTGTTAGAGACTCTGTTTCTTGGA CCACTATGATATCTGGGTATTGTCGAAACGGGTACCCTGAGTATAGCATTGAAACTTTTGCTTCAATGCTGAGGGATTGTAGTGATGGAAACTGTGATGT TTTTTCGTTTACTAGTGTAATGAAAGCTTGTGGATGCCTTGGTTATACTGATTTGGCTCTTCAACTACATGGACATGTTATTAAGAAATTGGATTTAGGA AGCGAAAGTTGCATTCAGAATGCTGTTGTTGATATGTATGTTAAGTGTGGAGTGGTTAGTTTGGCAGAGAGTGTTTTTTTCAGCATTGAGAAGCCTAGTT TGTTTTGTTGGAACAGTATGATTTATGGTTATTCTAAATTCTATGGAGCTCGAAAATCTCTTGATTTATTTGCCCGGATGCCTGAACATGATGATGTTTC TTGGAACACGCTGATTTCAGTTTTCTCTCAACATGACCTTGGGATCCAGTGTCTTAGTATGTTTGTAGAAATGTGGAATCAGGGTTTTAGACCGAATTTC ATGACCTATGGTAGTGTATTTAGTGCTTGTGCCAGTATTTCTGATCTGGAGTGGGGTAAACATTTGCATTCCCGGATTCTTCGCATGGAACATAGCATAG ATGCTTATTTGGGAAGTGGTCTCATGGATATGTACGCAAAGTGTGGATGCTTGGGACTTGCGAGGCGTGTGTTTGACGGTTTAGGGGAACGTAACGAAGT TTCTTGGACTTGTTTGATCACTGGGGTGGCACAGTGTGGACTTGAAGAAGAGGCTCTGGCACTGTTAAACCAAATGAGACAGGATTCTGTAGTTTTGGAT GATTTTACTCTTGCCACAGTTCTCGGAGTTTGTTCAGGCCAAAATTATGCTACAGTTGGGGAACTACTTCATGGATATGCAATCAAAAGTGGGATGGATT CTTCTGTTCCGGTAGGGAATGCTATCATCACAATGTATGCTAAGTGTGGAAATACTGACAAAGCTAGTCTTGCTTTTAGATCAATGCCACTTAGAGATAC TATATCATGGACGGCAATGATCACTGCATTCTCTCAAAACGAGGACATTCACAGAGCCCGAGAATATTTTGATACAATGCCTGAGCGTAATGTCATCACT TGGAACTCGATGTTAAGCACATATGTTCAACATGGCTTCTCAGAAGAAGGACTGAAGTTGTATGTATTGATGAGAAGAGAGGGGGTTGAGCCGGATTGGA TCACTTTTGCAACTTCTATAAGGGCCTGTGCTGACTTAGCTGTTATAAAACTTGGGATACAAGTTGTATCCCATGCTACAAAGTATGCCCTTAATTCGGA CGTTTCAGTTGCAAATAGTATTGTTACCATGTATTCAAGATGTGGACAAATCAAAGAAGCACAGAAAGTGTTTGACTCGATATATTTGAAAAACCTAATT TCCTGGAATGCTATGATGGCAGCATATGCTCAGAATGGTTTAGGTAAGCAATTAATTGAGACATTCGAGGACATGTTGAAGGCGGAGTGCAAACCAGATC ATATAAGCTATATTTCTGTTTTATCTGGGTGCAGCCATATGGGCCTTGTAGAAGAAGGGAAACATTACTTTGATTCTATGACTAAAGTTTTTGGAATTTC CCCAACACGTGAGCATTTTGCTTGTATGGTAGATATGCTTGCCCGGGCAGGGTTGCTAGATCAGGCAAAGAATTTGATAGATGGAATGCCTTTTAAGCCA AATGCCACTATTTGGGGGGCTTTACTAGGAGGTTGCCGAATCCATCATGACTCCAGACTAGCCGAAACTGCAGTGAAGAACTTGACGGAATTAAACATTG AAGATTCTGGAGGCTATGTCCTTCTAGCAAATATATATACGGAGTCTGGAGAGTTACAAGGTGTTGCCAATATGAGAAAGCTGATAAAAGATAAAGGAAT TCAAAAGAGTCCAGGTTGTAGCTGGATTGAGGTTGATAACAGGGTACATGTGTTCACCGTAGATGACACCAGTCATCCACAGATAAAGGAAGTTTATATG AAACTGGAGGAGATGATGAAGAAGATAGAAGATACGGGAAGATATATTAAAGTAGCCTCTTCTACTCATCGGAGTCAAGAATACCATAGTGAAAAACTTG CCTTTGCTTTTGGGTTGCTTAATGTGCCATCTTGGAAGCCTATACATGTAATGAAGAATCTCCGTGTCTGCCATGATTGTCACTTGGTAATAAAGCTGTT GTCTTTTCTCACCTCTAGGGAGCTTGTCATGCGAGATGTGTATCGGTTCCATCATTTCAAGGATGGGTTTTGCTCCTGTGGAGACTATTGGTAATCTGTG GTATACATTCTATATCTGGTTCCTCATTGCTTTTACTGCATGCATTTTTCCTCCTCAACAACCAGCGATCATTTATTAAAAGAGTCTACTAATTATATTC TAGTTATTACAAGAGTTTTGCATATGGCTACCAGAAATTTGACAGTCAGATGATGCTTAACATATGATAATTCTTAAAAATACCAACACATGTTGTTGTC TTGCTGATATATAATTCCGAAAATAAAGGTTTCTGTCATTGAAGTTTTTTTCTTAAATGATGGAAGAAATGATTGGGGACCAGAGTTGCTTCAATTTATG TTCATGACACATGAAGGAGGATGAAGAGTGTATGATCAGTAAATACAGTTTGAGTTTCAATGCTGTTACCAAATTCCCGACTTCTGCGAAAAGAGGAAGA GGATTGACAGAAACAGTACCAGCAAGAAAACCCAGCACTCTCTGGTGTCCTTTGCCTTGAACCCTGCCCGCTAAAGATCATTTCCTGGAATACCCCTGTT TTTACCATTATTCTCTGACTTTGGCAGCTGGAGAATCAAATGGAAACAACAACAACAACTAAGCCTTAATACCTTTAGATGGAGTCTACTACATAGATCG AGCGACGTCACAATGTTCTATCATAAATCAGGTTCATTAACAAAACATTGATCTGTAAGTGACAAGAGGCAAGGGAAATAGCATGGAGAAGGCTAACAGA TTTTGACTGGATTCTATATCAATGCCTAATGAACAATGAGGCAAAGGGTAGAATTAGGAAACATGGTAACAGTTGAGAAGCTCTCCAAATTGCAGACTAG GATTCAGTGGTTTGATTGAAAGTTGTGGGTATCAAGAAGAGCTAATTCCATAACTATTAAACTTGTATTATGCACATAGATTAGAGAATAAAGTATCTCC TTATACCAGAGGATAAGTTATCTTCTTAAAACCATTCATTGATTGACA
• Tissue: pods
• Gene name: LI_gene_191325;
• Additional information: details;

Expression of Ll_transcript_307255

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.4
• PS2: 0.2
• PS3: 0.3
• PW1: 0.1
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_307255

• Blastp: Pentatricopeptide repeat-containing protein At2g13600 from Arabidopsis with 39.42% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g13600 from Arabidopsis with 39.42% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G13600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455035.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;