Id Trinity | TRINITY_DN52262_c1_g1_i4 |
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Name Transcript | Ll_transcript_305847 |
Sequence | GAATTAGGCATTCCAAGTAAGCAGCCCTCAAATTATTTTTGCAAGACCTTAACTGCAAGTGACACCAGCACACATGGAGGATTCTCTGTTCCCCGTCGTG CAGCTGAGAAAGTTTTCCCTCCACTGGATTTCTCACTTCAACCACCTGCACAAGAACTAATTGCCAGGGATCTCCATGATGTTGAGTGGAAATTTCGGCA TATTTTCCGGGGGCAGCCAAAACGGCACCTTCTTACAACAGGATGGAGTGTATTTGTTAGTGCGAAAAGGCTTGTCGCTGGAGATTCTGTACTTTTCATA TGGAATGAAAAAAATCAGCTTCTTTTGGGAATACGTCGTGCCAATCGGCCACAAACTGTGATGCCATCATCAGTTCTATCCAGTGATAGTATGCACATTG GGCTTCTCGCTGCTGCTGCCCATGCTGCAGCAACCAATAGCTGCTTTACAGTGTTCTATAATCCAAGGGCTAGCCCATCCGAGTTCGTCATTCCACTATC AAAATATATTAAAGCTGTGTATCATACACGTGTTTCTGTTGGCATGCGTTTTAGGATGCTTTTTGAGACTGAAGAGTCAAGTGTCCGTAGGTACATGGGT ACTATAACTGGCATAAGTGACTTGGATCCCATTCGTTGGCCGAATTCTCATTGGCGATCAGTCAAGGTTGGTTGGGATGAATCAACAGCAGGAGAGAGAC AGCCACGGGTGTCATTGTGGGAAATTGAGCCTTTAACAACATTTCCGATGTATCCATCACTATTTCCCCTCAGATTGAAACGTCCATGGCATCCTGGCTC CTCATCTTTTCTTGATGGCAGAGACGAGACAACTAATGAGCTAATGTGGCTGAGAGGTGGAC BLAST |
Tissue | pods |
Gene name | LI_gene_191341; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_305847
Blastp | Auxin response factor 8 from Arabidopsis with 89.82% of identity |
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Blastx | Auxin response factor 8 from Arabidopsis with 89.82% of identity |
Eggnog | auxin response factor(ENOG410YA3R) |
Kegg | Link to kegg annotations (AT5G37020) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019455755.1) |
Pfam | B3 DNA binding domain (PF02362.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |