Id Trinity | TRINITY_DN52264_c1_g1_i6 |
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Name Transcript | Ll_transcript_307052 |
Sequence | CTGATATATACAGAGCTATTTCTGAAAAACTACACACTTAGCTAATAATGGCTACTACATTTTGTACATACCTCATTTTTCTTCTCTCATTCACCTTCAC AATCTTCAATCTCAGTTCATATTCTTCACCATCAGAATCTGATACTCTTCTCACATTCAAAGCCTCAATCCAAGACTCTAACAATGCATTATCAACATGG TCCAATACTTCATCAAACCTTTATTGTAACTGGACTGGAATCTCATGCTCAACAACAAAACCAGTTTCAGTAACTTCTATTAACCTTCAAAGCTTAAATC TTTCTGGTGATATATCTTCTTCTATATGTGATTTACCAAAAATCTCTTACCTCAACCTTGCTGATAATAATTTCAATGAACCTATTCCACTTCACCTTTC ACAGTGTAGTTTCTTGGAAACTTTGAATCTAAGTAGCAATCTTATATGGGGTACTATCCCATCTCAGATTTCTCAGTTTGGTTCACTGAAAGTACTTGAC TTGAGTAGAAATCATATAGAAGGAAATATCCCTGAAAGCTTGGGTTCATTGAAGAATCTTCAAGTACTTAAAATTGGAAGTAACTTGCTTTCAGGTAATG TGCCTGCTATTTTTGGAAACTTAACTAAGCTTGAAGTGCTTGATTTTTCTCAAAATCAATACTTGGTGAGTGAGATACCTGAGGATATTGGTGAACTTGG AAGTTTAAAGCAACTTTTGCTTCAAAGTTCTTCTTTTCAAGGTGAGATTCCAGGTTCTTTGGTTGGCCTTCATAGTTTGACACATTTGGATCTATCTGAG AATAATCTAACAGGTTTGGTTCCAAAGTCTCTAGCTTCTTTGAAGAATCTGGTTTCCTTTGATGTTTCACAGAACAAGCTTTCAGGGCCCTTTCCAAATG GTATTTGTAAAGGCCTTGTTATAAATCTCAGCCTCCACACAAATACCTTCACAGGTTCAATATCAAACAGTTCTATTAGTGAATGTGAGAGTCTTGAGAG ATTCCAAGTTCAGAACAATGGTTTCTCTGGAGATTTCCCTATTGAGATTTTTTCATTACCTAAAATCAAGCTCATTAGAGCTGAAAACAATAGATTCTCT GGTCAAATACCTGAGTCAATTTCAAAAGCTGTTTTTTTGGAGCAAGTTCAGTTTGACAATAACAGCTTTTCTGGTAAAATCCCTCATGGACTTGGCTTTG TGAAGAGCTTATACAGATTCTCAGCTTCTTTAAATCATTTATATGGTGAACTTCCTCCAAATTTTTGTGACTCACCAGTTATGAGCATAGTAAACCTCTC CCACAATTCACTTTCTGGTCAAATCCCTCAGCTGAAAAAATGCAGGAAACTTGTGTCATTGTCTTTGGCTGATAATCATGTAACTGGAGAAATACCAACT TCACTTTCTGAGTTACCAGTGTTGACTTATCTTGACCTTTCAGATAACAATCTTACTGGTTCAATACCACAAGGGCTTCAAAACTTGAAACTTGCACTTT TCAATGTTTCCTTCAATCAACTTTCTGGTAAAGTACCATACTCCTTAATTTCAGGTCTACCTGCCTCATTTTTGGAGGGTAACCCTGATCTTTGTGGACC TGGATTACCAAACTCATGTTCTGATGATGATATGCCAAGGCATCATAATAGTGGTCTTACAATCTTAACATGTACATTGATCTCTTTAGCCTTTGTTGTT GGAACTGGCTTTGTTGTTGGTGGATTTGTTTTGTATAGAAGATCTTGCAAGGGGAACGATAATGAAGTAGGTGTTTGGCGCTCGGTGTTCTTCTATCCTC TTAGAATTACTGAGAATGAATTACTTATCGGGATGAATGAGAAAAGCTCATTAGGGAAAGGAGGAATTTTTGGTAAAGCTTATGTTGTGAGTTTGCCTAG TGGTGAATTAGTAGCAGTGAAGAAGCTAGTTAATTTCGGAAACCAGTCTTCGAAGAGTTTGAAAGCTGAGGTAAAAACTTTGGCAAGGATTAGGCATAAA AATGTTGTTAAAATTCTGGGGTTCTGTCATTCTGATGAGTCAGTTTTTCTCATCTATGAGTACTTGAATGAAGGAAGCTTAGGGGATTTGATTTCAAGTC AGGATTTTCAGTTGCAATGGGGAGTTAGATTGAGAATTGCTATTGGAGTTGCTCAAGGAATTGCTTATCTTCACAAAGATTATGTCCCACACTTGCTTCA CAGAAATGTCAAGTCAAACAACATTCTGTTGGATGCAAACTTTGAACCAAAGCTAACTGATTTTGCTCTTGATAGAGTCTTGGGAGAAGCTGCTTTTCTG TCAACACTGGATTCTGAAGGAGCATCTTCATGTTACAATGCACCAGAATATGGTTACAATAAGAAACCAACAGAACAATTGGATGTGTACAGCTTTGGTG TTGTATTGCTAGAGCTAGTGAGTGGAAGACAAGCAGAGGCAACAGAGTCAAATGATGCCTCACTTGACATAGTAAAATGGGTTAGAAGGAAAGTAAACAT AACTAATGGGGTGCAACAAGTTCTTGACCCTACAATATCACATACTTGTCACCAAGCAATGGTTGGACCTCTATATATAGCACTTAGTTGCACTTCTGTG GTGCCTGAGAAAAGACCATCAATGGTAGAAGTTGTTAGAGGTCTTCAGTCCTTAGAGTCAAGGGCTTGCATTTGCAAATTTGCAGGATCAAACTGAAGAA CATTCCATTTCCGTATGAACTTCTAAGTTATGACTAAAGTTTCCTATTTTTGTT BLAST |
Tissue | pods |
Gene name | LI_gene_191351; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_307052
Blastp | Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 from Arabidopsis with 63.05% of identity |
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Blastx | Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 from Arabidopsis with 62.46% of identity |
Eggnog | leucine Rich Repeat(COG4886) |
Kegg | Link to kegg annotations (AT5G06940) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019426200.1) |
Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |