Ll_transcript_307296

• Id Trinity: TRINITY_DN52269_c0_g1_i10
• Name Transcript: Ll_transcript_307296
• Sequence: GAATTACCCAATACGACGTCGTATATTCCCACTTTCTGGCGACTGAAAATCTCAAATGATCTGAACGAAAATTTCATTCATCTGAGCTCATAAGAAGAAG AAGATGATGGATCCTTCTAGAACGCCACTGGGACAAATGCTATTGGACGAGATCATTCCTGTTCTAACGCTCCTTTCTACTCCCACCGTAGAGGATTCCT GCCTCAAAAACGGCCTCACTTTTCTTCAATTGCTATCTCCATTCTCCTCCTTCAACAACATCGACGGTTATTAAATCAAATCAAATCAAATCTCATTCTC TTCCATTTTCCATTTCATTACAACTTTTCAGTTTCTCACTTTCTATTTTTGAATCTTCTAGTTCCTGTTAGAACCGCGAGTGATCAACCTTACCGCATTC ACAACTTCAAATTGCGCTTATTTTACGCTTCCGATGTTAGAAGCCCCGATTTGAAGGAAGCTAAAGAGCATTTGAAACAAGTTATCACGGAAGCAGGGGA GAGAGTGTTCTCTGAGCTCACTTCAGATGAAGAAGAAATTGATCAACATCAACAACGTGCCAGTTTTGAATACAGAAATACACCATCATGGTTTCAACTT CTCAATAAAGAGCTTGTCCGCGTGGCTTCCTTTTCAGACCATGAAGCTTTTGACCATCCTGTGGCATGTCTTCTAGCTGTTTCTTCAAAAGATGAACAGC CTATTAACAGATTTGTTGACCTTTTTAATACGAACAAGCTTCCTTCCCTTCTTAATGATGGTGCAATGGATCCAAATATTTTGAAGCATTACTTGTTAGT GCATGATAATCAAGATGGGTCTGTAGAAAGAGCAAGTAGAATATTGACAGAAATGAGGAGTGCATTTGGTACAAGTAACTGTTTGTTGCTTTGCATTAAT TCTTCATCGGATGCTCCAATCAAACATGAAGAAAATCCTTGGGCTTCATATATATCTGATGCCTCTCCTAGTCAAGATCACGGTTGCCTTCTTAACATTG ATGATATCAATGAGATCAAAGATCTAATGCAAAATTTATCATCTAAGCATATCATTCCAAACATGGAGCAAAAGATACGCGTGCTCAATCAACAGGTTTC TGCAACACGAAAAGGATTTAGAAACCAAATAAAAAACTTATGGTGGAGAAAAGGAAAAGAGGATGGTGCAGATTCTCCCAATGGTCCTATGTATAACTAT AACTCCACTGAATCCCAGATTAGAGTTTTGGGTGATTATGCTTTCATGCTACGAGATTATGAACTTGCCTTGTCAAATTATCGCCTAATTTCCACAGATT ACAAGATTGATAAAGCCTGGAAACGTTATGCTGGTGTACAGGAAATGATGGGACTTACATACTTCATGTCAGATCAATCAAGAAAGGAAGCTGAGTATTG CATGGAACATGCTTTTAACACATATTTAAAACTAGGATCCCTGGGTCAGCAAAATGCAACACGATGTGGTCTATGGTGGATAGAAATGTTGAAGGCACGA GATCAATATAAAGAGGCAGCTAGTGTTTATTTTCGTATTTGTGGTGAGGATATCTTACATTCTGCTGTGATGCTTGAACAAGCATCATACTGCTACTTGC TATCTAAACCCTCCATGTTGCGCAAATATGGATTTCATCTAGTGCTCTCTGGTGAGCAGTATAAAAAGTGTGATCAGGTCAAACATGCAATTCGAACATA CAGAAGTGCTCTTTCTGTTTTTAAAGGAACTACTTGGAGTTATATTGGTGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCTCTTGGGATGTAT GATGTGGCTGTCAAGCATATGATGGAGATCTTGGCCTGTAGTCACCAGTCCAAGTCAACTCAGGAATTATTCCTGGGTGACTTTCTTCAAATTGTTGAGA AAGCAGGACAGACATTTGAGGTAACAAAGCTTCAATTGCCTGTGATCAACATCTCTTCGCTCAAGGTCATCTTTGAAGATTACCGGACTTTTGGATCCCC TTCGTCTGCTAATACTAGTGAAGGCTTGTGGCGTTCTTTGGAGGAAGAAATGATTCAATCATTCTCTGCTGCCAAGACAAACTGGTTGGAATTGCAATCA AAGCTTGTCTCAAGGAAGCACAGTCAATCAAATGTTTGTGTTGCAGGGGAGGCTGTGAAGGTGAACATTGAATTCAAAAATCCTCTGCAAATCTCAATCC CCATATCTGGAGTTAGACTCATTTGCAAGCATTCCACTATTACTGATGAAGGTAGCCTAGATGAAAACAAGTCAAGTTTGGAGGATGATAACAGTGTTGA TCACTTCAAGGATATGAATTCAGACAATTCCTCATTTTTGGTGTCTGATGTTGATTTCTTACTAGGAGGTGGTGAAACAACTCTGGTTCAACTATCGGTT ACTCCGAGGGTAGAAGGTACTCTTGAAATTCTTGGTGTTAGGTGGAAACTGTCAGGTACTATAGTTGGCTTTCACAAGTTTGAGTTTAGCCTCCCAAAGA ATATTGTAAAAGCTAGAAGGAAAGGAAAGCGCTCACCTAATGACAAGTTTAAGTTTATGGTCATTAAGAGCATACCCAAACTTCAAGCTTCCATTAATTT GTTACCTGGAAAGGCATATGCTGGAGATTTACGGCAACTTGTTTTAGAGTTGAAGAACCCATCTGAGTTTCCTGTCAAGAATCTGAAGATGAAGGTAAGT GATCCTAGGTTCCTTATTATAGGGAATCAGGGAGATATGAAGTCAGAGTTTCCTGCTTGCTTAACAAAGAAGACAGATTCATCGGTACAAACTGATGCAC AAGCCAATAATAGTATCTTGTCTGACACAGTCTTTCTGTTTCCAGAGGGCACTTCAGTGCAAGGTGAAACACCTTTCTTGTGGCCTCTTTGGTTTAGGGC TGCTGTTCCAGGTGAAATTTCCCTTTACTTGAGCATATATTATGAGATGGAAGATATATCGAGTGTCATCAAATATCGCACCCTGCGCTTGCATTACAAC GTGCAGGTATTACCATCATTGGATGTCTCATTTCAAATTAGTCCTTCTCGATTGAGAATACAAGAATTCCTTGTTCGGTTGGATGTTGTTAACAAGACAA GCTCGGAATGTTTCCAAGTTTATCAATTGTCATCTATTGGGCAAAACTGGAAAGTCTCATTACTTCAACCCCCTGATACTATTTTTCCTTCACAATCATT GATGGCTGGTCAAGCAGTATCGTGTTTCTTCACACTAAAGAAATCAAATACATTATCGACTTTTGAGGACAACATCTCTACCATGTCTGTCACAAGTGAT GTAAGATTGGTTCCCCAAAGCAGTGAGGATTTAGTTTACAATGTAAACAGTGCACCTTTGGTCAATTTCCACCATTATGAAAGATTGCAGCAGGAATTGT CACACGAGGTTGACTTAAATACTATTGATTTTGTATTGATCTCTCGACCACTCAAGAGTAACAATAATCTTGGTTTTTCTGATCCTCCTCATGTTATGTC ACATCATGCGAGTCACTCCAGTACTGCTAGCACAGGCCCTATTTCATGGCTGCTAGATGGACCTCAAACCTTGCATCATGATTTCTCTGAATCTTTCTGT GAAATAGATCTGAAGATGCATCTTTACAATTCTTCCATTGCCACTGTTTTTGTGCGCATTGACACCTCAGATCCTGTGGGTATTAGCGGACAGACTAACA GTTTTGATGCGGTTCAATCAGCAACGCCCGATAACCAAGCAGGGTGGCATGATGTCTCAACAGTGAATGAACTTAAAGTCACCACATCAAATGTTCTTGA AACCCAACCAGGAAAGGCACTATCATTGGAAGGTGTTTCCCCTTACATTTGGTCTGGGTCAGGCTCTACCAATCTCCACATTGAGCCTCTGTCCTCCGCG GAAATTCCTCTTCAGATATGTATGTTCTCTCCTGGGACATATGATCTATCAAATTACACTTTGAGTTGGAACCTTCCATCCAAAGTTCCGGGAGATTCTA ACGAAACGAAACAGTCTTCAGGCAAGTGCCAAGGATATAAATACTATCTCACTGTGCTCCAATCCGCTTGAGAAGCAGGTAATTGTTTTTGCTGTCCGTT TACAACTCGTGCTGCAATTTTAGATCTGATTTGTAACTGTGGGGTGTATATATGAAGTACTTTACTCCATGTATTATTAAACAGCAATAGGAACAAGGTA CCATGTAAAAGATTTCAGAGGGAAAATTGGTAGGAACACAAGTTATTTTTGTTCAAACAATAATGACAGTGAAAATATATTTGGACTGGCCTAATTTGAG AAAGGAAGTCAAGGGCAAGTATTTTTGTAAAGACAATCTTCCTGTAACATATACTATATGCCCCACAGTTGATGGAATTTGAGTAGAGTAATCGAACCAC AGTTCCTATACATTGGACTTGTGGGTGCTATCAGCACAAAAAAATGGTTATACCAATCTTTTGGGAAGATGAAGGAGCAATTCTTCTTTCTAGTTTTGAT ACATATGTTCAAAGAACTTCAGAGTGCTTTAGTTTTCAGACTGTTGCAGATTGTAAGACAAGGTTTATATGCTATGAAAAGTTGTTGAGAGTTTTATGGT ACAATTTGATCAAGTACTCCTATGTATTTTGTTATTACAATAATGTATTTTTTTTTTAATTTTTGGAGTTAATATTACAAGTTTATGGTAAGACTGGCA
• Tissue: pods
• Gene name: LI_gene_191387;
• Additional information: details;

Expression of Ll_transcript_307296

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.1
• PS2: 0
• PS3: 0.3
• PW1: 0.9
• PW2: 0.7
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_307296

• Blastp: Trafficking protein particle complex subunit 8 from Homo with 26.26% of identity
• Blastx: Trafficking protein particle complex subunit 8 from Homo with 27.61% of identity
• Eggnog: trafficking protein particle complex(ENOG410XPCJ)
• Kegg: Link to kegg annotations (22878)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455479.1)
• Pfam: ER-Golgi trafficking TRAPP I complex 85 kDa subunit (PF12739.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;