| Id Trinity | TRINITY_DN52269_c0_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_307301 |
| Sequence | GTTCTCAATCAACAGGTGTCTGCATCACGAAAAGGTTTTAGAAACCAAATAAAAAACTTATGGTGGAGAAAAGGAAAAGAGGATGGTGCAGATTCTCTCA ATGGTCCTATGTATAACTATAACTCCATTGAATCTCAGATTAGAGTTTTAGGTGATTATGCTTTCATGCTACGGGACTATGAACTGGCCTTGTCAAATTA TCGCCTAATTTCCACAGATTACAAGATTGATAAAGCCTGGAAACGTTATGCTGGTGTGCAGGAAATGATGGGACTTACGTACTTTATGTCGGATCAATCA AGAAAGGAAGCTGAGTACTGCATGGAAAATGCTTTTAACACATATTTAAAACTTGGGTTGCCGGGTCAGCAAAATGCAACACGATGTGGCCTATGGTGGG TGGAAATGTTGAAGGCATGGGATCAATATAAAGAGGCAGCCACTGTTTATTTTCGTATTTGTGGTGAGGATACCTTACATTCTGCTGTGATGCTTGAACA AGCATCATACTGCTACTTGCTATCTAAACCCTCCATGTTACGCAAATATGGATTTCATTTAGTGCTCTATGGTGAGCAGTATAAGAAGTGTGATCAGATC AAACATGCAATTCGAACATACAAAAGTGCTCTTTCTTTTTTTAAAGGAACCACTTGGAGTTATATCCATGATCATGTTCATTTCCATATAGGACAGTGGT ATGCTTCTCTTGGGATGTATGATGTGGCTGTCAAGCATATGATGGAGGTCTTGGCCTGTAGTCATCAGTCCAAGTCAACGCAGGAATTATTCGTGGGTGA CTTTCTTAAAGCTGTTGAGAAAACAGGACGGACATTTGAGGTAACAAAGCTCCAATTGCCTGTGATCAACATCTCTTCGCTCAAGGTCATCTTTGAAGAT TACCGGACTTTTGGATCCCCTTTGGCTGCTAATACTAGAGAAAGCTTGTGGCGTTCTTTAGAGGAAGAAATGATTTCATCATTCTCTGCTGCCAAGACAA ACTGGTTGGAATTGCAATCAAAGCTTGTCTCAAGGAAGCACAGTCAATCAAATGTTTGTGTTGCAGGGGAGGCTGTGAATGTGAATATTGAATTCAAAAA CCCTCTGCAAATAGCAATCCCCGTATCTGGTGTTACACTCATTTGCAAGCATTCTGCTATTACTGACGAAGTTAGACTAGATGAAAACAAGTCAGTTGTG GGGGATGATAATGACATTGATCACTTCAAAGATATGAGCTCAAACAATTCCTCAATTTTGATGTCCGAGGTTGATTTCTTACTAGGGGGCGGTGAAACAA CAATGGTTCAACTATCAGTTACTCCCAGAGTAGAAGGTACTCTTGAAATTCTCGGTTTTAGGTGGAAACTGTCAGGTACAATAGTTGGCTTTCACAAGTT TGAGTTGAGCCTCCCAAAGCATATTGTAAAATCTAGAAGGAAAGGAAAGCGCTCACCTAATGACAAGTTTAAATTTATCGTCATCAAGAGCATACCCAAA CTTGAGGCTTCCATTAATTCGTTACCTGGAAAGGCATATGCTGGAGATTTACGGCAACTTGTTTTAGAGTTGAAGAACCCATCTGAGTTTCCTGTTAAGA ATCTGAAGATGAAGATAAGTCATCCTAGATTCCTTATTATTGGGAATCAAGAAGATATAAAGTCAGAGTTTCCTGCTTGTTTAACAAAGAAGATAGATTC AGGACAAAGTGATGCACATGCCAATCGTAGTATCTTGTCTGACACAGTCTTTTTGTTTCCAGAGGGCACTTCAGTTCAAGGTCAAACGCCTTTCTTGTGG CCTCTTTGGTTTAGGGCTGCTGTTCCAGGTGAAATTTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_191387; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_307301
| Blastp | Trafficking protein particle complex subunit 8 from Homo with 28.48% of identity |
|---|---|
| Blastx | Trafficking protein particle complex subunit 8 from Homo with 28.44% of identity |
| Eggnog | trafficking protein particle complex(ENOG410XPCJ) |
| Kegg | Link to kegg annotations (22878) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444201.1) |
| Pfam | ER-Golgi trafficking TRAPP I complex 85 kDa subunit (PF12739.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |