Ll_transcript_307302

• Id Trinity: TRINITY_DN52269_c0_g1_i15
• Name Transcript: Ll_transcript_307302
• Sequence: GAATTACCCAATACGACGTCGTATATTCCCACTTTCTGGCGACTGAAAATCTCAAATGATCTGAACGAAAATTTCATTCATCTGAGCTCATAAGAAGAAG AAGATGATGGATCCTTCTAGAACGCCACTGGGACAAATGCTATTGGACGAGATCATTCCTGTTCTAACGCTCCTTTCTACTCCCACCGTAGAGGATTCCT GCCTCAAAAACGGCCTCACTTTTCTTCAATTGCTATCTCCATTCTCCTCCTTCAACAACATCGACGTTCCTGTTAGAACCGCGAGTGATCAACCTTACCG CATTCACAACTTCAAATTGCGCTTATTTTACGCTTCCGATGTTAGAAGCCCCGATTTGAAGGAAGCTAAAGAGCATTTGAAACAAGTTATCACGGAAGCA GGGGAGAGAGTGTTCTCTGAGCTCACTTCAGATGAAGAAGAAATTGATCAACATCAACAACGTGCCAGTTTTGAATACAGAAATACACCATCATGGTTTC AACTTCTCAATAAAGAGCTTGTCCGCGTGGCTTCCTTTTCAGACCATGAAGCTTTTGACCATCCTGTGGCATGTCTTCTAGCTGTTTCTTCAAAAGATGA ACAGCCTATTAACAGATTTGTTGACCTTTTTAATACGAACAAGCTTCCTTCCCTTCTTAATGATGGTGCAATGGATCCAAATATTTTGAAGCATTACTTG TTAGTGCATGATAATCAAGATGGGTCTGTAGAAAGAGCAAGTAGAATATTGACAGAAATGAGGAGTGCATTTGGTACAAGTAACTGTTTGTTGCTTTGCA TTAATTCTTCATCGGATGCTCCAATCAAACATGAAGAAAATCCTTGGGCTTCATATATATCTGATGCCTCTCCTAGTCAAGATCACGGTTGCCTTCTTAA CATTGATGATATCAATGAGATCAAAGATCTAATGCAAAATTTATCATCTAAGCATATCATTCCAAACATGGAGCAAAAGATACGCGTGCTCAATCAACAG GTTTCTGCAACACGAAAAGGATTTAGAAACCAAATAAAAAACTTATGGTGGAGAAAAGGAAAAGAGGATGGTGCAGATTCTCCCAATGGTCCTATGTATA ACTATAACTCCACTGAATCCCAGATTAGAGTTTTGGGTGATTATGCTTTCATGCTACGAGATTATGAACTTGCCTTGTCAAATTATCGCCTAATTTCCAC AGATTACAAGATTGATAAAGCCTGGAAACGTTATGCTGGTGTACAGGAAATGATGGGACTTACATACTTCATGTCAGATCAATCAAGAAAGGAAGCTGAG TATTGCATGGAACATGCTTTTAACACATATTTAAAACTAGGATCCCTGGGTCAGCAAAATGCAACACGATGTGGTCTATGGTGGATAGAAATGTTGAAGG CACGAGATCAATATAAAGAGGCAGCTAGTGTTTATTTTCGTATTTGTGGTGAGGATATCTTACATTCTGCTGTGATGCTTGAACAAGCATCATACTGCTA CTTGCTATCTAAACCCTCCATGTTGCGCAAATATGGATTTCATCTAGTGCTCTCTGGTGAGCAGTATAAAAAGTGTGATCAGGTCAAACATGCAATTCGA ACATACAGAAGTGCTCTTTCTGTTTTTAAAGGAACTACTTGGAGTTATATTGGTGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCTCTTGGGA TGTATGATGTGGCTGTCAAGCATATGATGGAGATCTTGGCCTGTAGTCACCAGTCCAAGTCAACTCAGGAATTATTCCTGGGTGACTTTCTTCAAATTGT TGAGAAAGCAGGACAGACATTTGAGGTAACAAAGCTTCAATTGCCTGTGATCAACATCTCTTCGCTCAAGGTCATCTTTGAAGATTACCGGACTTTTGGA TCCCCTTCGTCTGCTAATACTAGTGAAGGCTTGTGGCGTTCTTTGGAGGAAGAAATGATTCAATCATTCTCTGCTGCCAAGACAAACTGGTTGGAATTGC AATCAAAGCTTGTCTCAAGGAAGCACAGTCAATCAAATGTTTGTGTTGCAGGGGAGGCTGTGAAGGTGAACATTGAATTCAAAAATCCTCTGCAAATCTC AATCCCCATATCTGGAGTTAGACTCATTTGCAAGCATTCCACTATTACTGATGAAGGTAGCCTAGATGAAAACAAGTCAAGTTTGGAGGATGATAACAGT GTTGATCACTTCAAGGATATGAATTCAGACAATTCCTCATTTTTGGTGTCTGATGTTGATTTCTTACTAGGAGGTGGTGAAACAACTCTGGTTCAACTAT CGGTTACTCCGAGGGTAGAAGGTACTCTTGAAATTCTTGGTGTTAGGTGGAAACTGTCAGGTACTATAGTTGGCTTTCACAAGTTTGAGTTTAGCCTCCC AAAGAATATTGTAAAAGCTAGAAGGAAAGGAAAGCGCTCACCTAATGACAAGTTTAAGTTTATGGTCATTAAGAGCATACCCAAACTTCAAGCTTCCATT AATTTGTTACCTGGAAAGGCATATGCTGGAGATTTACGGCAACTTGTTTTAGAGTTGAAGAACCCATCTGAGTTTCCTGTCAAGAATCTGAAGATGAAGG TAAGTGATCCTAGGTTCCTTATTATAGGGAATCAGGGAGATATGAAGTCAGAGTTTCCTGCTTGCTTAACAAAGAAGACAGATTCATCGGTACAAACTGA TGCACAAGCCAATAATAGTATCTTGTCTGACACAGTCTTTCTGTTTCCAGAGGGCACTTCAGTGCAAGGTGAAACACCTTTCTTGTGGCCTCTTTGGTTT AGGGCTGCTGTTCCAGGTGAAATTTCCCTTTACTTGAGCATATATTATGAGATGGAAGATATATCGAGTGTCATCAAATATCGCACCCTGCGCTTGCATT ACAACGTGCAGGTATTACCATCATTGGATGTCTCATTTCAAATTAGTCCTTCTCGATTGAGAATACAAGAATTCCTTGTTCGGTTGGATGTTGTTAACAA GACAAGCTCGGAATGTTTCCAAGTTTATCAATTGTCATCTATTGGGCAAAACTGGAAAGTCTCATTACTTCAACCCCCTGATACTATTTTTCCTTCACAA TCATTGATGGCTGGTCAAGCAGTATCGTGTTTCTTCACACTAAAGAAATCAAATACATTATCGACTTTTGAGGACAACATCTCTACCATGTCTGTCACAA GTGATGTAAGATTGGTTCCCCAAAGCAGTGAGGATTTAGTTTACAATGTAAACAGTGCACCTTTGGTCAATTTCCACCATTATGAAAGATTGCAGCAGGA ATTGTCACACGAGGTTGACTTAAATACTATTGATTTTGTATTGATCTCTCGACCACTCAAGAGTAACAATAATCTTGGTTTTTCTGATCCTCCTCATGTT ATGTCACATCATGCGAGTCACTCCAGTACTGCTAGCACAGGCCCTATTTCATGGCTGCTAGATGGACCTCAAACCTTGCATCATGATTTCTCTGAATCTT TCTGTGAAATAGATCTGAAGATGCATCTTTACAATTCTTCCATTGCCACTGTTTTTGTGCGCATTGACACCTCAGATCCTGTGGGTATTAGCGGACAGAC TAACAGTTTTGATGCGGTTCAATCAGCAACGCCCGATAACCAAGCAGGGTGGCATGATGTCTCAACAGTGAATGAACTTAAAGTCACCACATCAAATGTT CTTGAAACCCAACCAGGAAAGGCACTATCATTGGAAGGTGTTTCCCCTTACATTTGGTCTGGGTCAGGCTCTACCAATCTCCACATTGAGCCTCTGTCCT CCGCGGAAATTCCTCTTCAGATATGTATGTTCTCTCCTGGGACATATGATCTATCAAATTACACTTTGAGTTGGAACCTTCCATCCAAAGTTCCGGGAGA TTCTAACGAAACGAAACAGTCTTCAGGCAAGTGCCAAGGATATAAATACTATCTCACTGTGCTCCAATCCGCTTGAGAAGCAGGTAATTGTTTTTGCTGT CCGTTTACAACTCGTGCTGCAATTTTAGATCTGATTTGTAACTGTGGGGTGTATATATGAAGTACTTTACTCCATGTATTATTAAACAGCAATAGGAACA AGGTACCATGTAAAAGATTTCAGAGGGAAAATTGGTAGGAACACAAGTTATTTTTGTTCAAACAATAATGACAGTGAAAATATATTTGGACTGGCCTAAT TTGAGAAAGGAAGTCAAGGGCAAGTATTTTTGTAAAGACAATCTTCCTGTAACATATACTATATGCCCCACAGTTGATGGAATTTGAGTAGAGTAATCGA ACCACAGTTCCTATACATTGGACTTGTGGGTGCTATCAGCACAAAAAAATGGTTATACCAATCTTTTGGGAAGATGAAGGAGCAATTCTTCTTTCTAGTT TTGATACATATGTTCAAAGAACTTCAGAGTGCTTTAGTTTTCAGACTGTTGCAGATTGTAAGACAAGGTTTATATGCTATGAAAAGTTGTTGAGAGTTTT ATGGTACAATTTGATCAAGTACTCCTATGTATTTTGTTATTACAATAATGTATTTTTTTTTTAATTTTTGGAGTTAATATTACAAGTTTATGGTAAGACT GGCA
• Tissue: pods
• Gene name: LI_gene_191387;
• Additional information: details;

Expression of Ll_transcript_307302

FPKM

• PAB: 0.2
• PNAB: 2.4
• PS1: 3.2
• PS2: 2.3
• PS3: 4.5
• PW1: 4.8
• PW2: 5.5
• PW3: 4.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_307302

• Blastp: Trafficking protein particle complex subunit 8 from Homo with 26.46% of identity
• Blastx: Trafficking protein particle complex subunit 8 from Homo with 27.61% of identity
• Eggnog: trafficking protein particle complex(ENOG410XPCJ)
• Kegg: Link to kegg annotations (22878)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455479.1)
• Pfam: ER-Golgi trafficking TRAPP I complex 85 kDa subunit (PF12739.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;