Ll_transcript_307288

• Id Trinity: TRINITY_DN52269_c0_g1_i3
• Name Transcript: Ll_transcript_307288
• Sequence: CAAATCTCTTTCAATTTTCAAATTTCAAAGTTCATTTCTCTCATTTTCGATTCTCTCGTTTTCTCACTTCGATTTTCTTTTTTGCAGTTCCTGTTAGAAC CGCTAGTGATCAACCTTATCGGATTCACAAGTTCAAATTGCGGTTATTTTATGCTTCTGATGTTCGGAACCCTGATTTGAAGGTAGCTAAAGAGCGTTTG AAACGAGTTATTACGGAAGCGGGGGAGAAAGTGTTCACTGAGCTCACTTCAGATGCACCAGAAATTGATCAACATAAAAAACTTGACAGTTCTGAATACA TAAATACACCATCATGGTTTCAATTTGTCAATAAAGAGCTTGTCCGTGTGGCTTCCTTTTCAGACCATGAAGCTTTTGACCATCCTGTGGCATGTCTTCT AGCTGTCTCTTCAAAGGATGAAAAGCCCGTTAACAGATTTGTTGATCTTTTAAATAGCAACAATCTTCCTTCCCTTCTTAATGATGGTGCAATGGATCCA AAGATTTTGAAGCTTTACTTGTTAGTGCATGATAATCAAGATGGGTCTGTAGAAAGAGCAAGTAGAATATTGACAGAAATGAGGAGTGCATTTGGTACAA GTAACTGTTTGTTGCTTTGCATTAATTCTTCATCGGATGCTCCAATCAAACATGAAGAAAATCCTTGGGCTTCATATATATCTGATGCCTCTCCTAGTCA AGATCACGGTTGCCTTCTTAACATTGATGATATCAATGAGATCAAAGATCTAATGCAAAATTTATCATCTAAGCATATCATTCCAAACATGGAGCAAAAG ATACGCGTGCTCAATCAACAGGTTTCTGCAACACGAAAAGGATTTAGAAACCAAATAAAAAACTTATGGTGGAGAAAAGGAAAAGAGGATGGTGCAGATT CTCCCAATGGTCCTATGTATAACTATAACTCCACTGAATCCCAGATTAGAGTTTTGGGTGATTATGCTTTCATGCTACGAGATTATGAACTTGCCTTGTC AAATTATCGCCTAATTTCCACAGATTACAAGATTGATAAAGCCTGGAAACGTTATGCTGGTGTACAGGAAATGATGGGACTTACATACTTCATGTCAGAT CAATCAAGAAAGGAAGCTGAGTATTGCATGGAACATGCTTTTAACACATATTTAAAACTAGGATCCCTGGGTCAGCAAAATGCAACACGATGTGGTCTAT GGTGGATAGAAATGTTGAAGGCACGAGATCAATATAAAGAGGCAGCTAGTGTTTATTTTCGTATTTGTGGTGAGGATATCTTACATTCTGCTGTGATGCT TGAACAAGCATCATACTGCTACTTGCTATCTAAACCCTCCATGTTGCGCAAATATGGATTTCATCTAGTGCTCTCTGGTGAGCAGTATAAAAAGTGTGAT CAGGTCAAACATGCAATTCGAACATACAGAAGTGCTCTTTCTGTTTTTAAAGGAACTACTTGGAGTTATATTGGTGATCATGTTCATTTCCATATAGGAC AGTGGTATGCTTCTCTTGGGATGTATGATGTGGCTGTCAAGCATATGATGGAGATCTTGGCCTGTAGTCACCAGTCCAAGTCAACTCAGGAATTATTCCT GGGTGACTTTCTTCAAATTGTTGAGAAAGCAGGACAGACATTTGAGGTAACAAAGCTTCAATTGCCTGTGATCAACATCTCTTCGCTCAAGGTCATCTTT GAAGATTACCGGACTTTTGGATCCCCTTCGTCTGCTAATACTAGTGAAGGCTTGTGGCGTTCTTTGGAGGAAGAAATGATTCAATCATTCTCTGCTGCCA AGACAAACTGGTTGGAATTGCAATCAAAGCTTGTCTCAAGGAAGCACAGTCAATCAAATGTTTGTGTTGCAGGGGAGGCTGTGAATGTGAATATTGAATT CAAAAACCCTCTGCAAATAGCAATCCCCGTATCTGGTGTTACACTCATTTGCAAGCATTCTGCTATTACTGACGAAGTTAGACTAGATGAAAACAAGTCA GTTGTGGGGGATGATAATGACATTGATCACTTCAAAGATATGAGCTCAAACAATTCCTCAATTTTGATGTCCGAGGTTGATTTCTTACTAGGGGGCGGTG AAACAACAATGGTTCAACTATCAGTTACTCCCAGAGTAGAAGGTACTCTTGAAATTCTCGGTTTTAGGTGGAAACTGTCAGGTACAATAGTTGGCTTTCA CAAGTTTGAGTTGAGCCTCCCAAAGCATATTGTAAAATCTAGAAGGAAAGGAAAGCGCTCACCTAATGACAAGTTTAAATTTATCGTCATCAAGAGCATA CCCAAACTTGAGGCTTCCATTAATTCGTTACCTGGAAAGGCATATGCTGGAGATTTACGGCAACTTGTTTTAGAGTTGAAGAACCCATCTGAGTTTCCTG TTAAGAATCTGAAGATGAAGATAAGTCATCCTAGATTCCTTATTATTGGGAATCAAGAAGATATAAAGTCAGAGTTTCCTGCTTGTTTAACAAAGAAGAT AGATTCAGGACAAAGTGATGCACATGCCAATCGTAGTATCTTGTCTGACACAGTCTTTTTGTTTCCAGAGGGCACTTCAGTTCAAGGTCAAACGCCTTTC TTGTGGCCTCTTTGGTTTAGGGCTGCTGTTCCAGGTGAAATTTCCCTTTACTTGAGCATATATTATGAGATGGAAGATATATCGAGTGTCATCAAATATC GCACCCTGCGCTTGCATTACAATGTGCAGGTATTACCATCACTGGATGTCTCCTTTCAAATTAGTCCTTCTCGATTGAGAATACATGAATTCCTTGTTCG ATTGGATGTGGTTAACAAGACAAGCTCAGAATGCTTCCAAGTTTATCAGTTGTCATCTATTGGGCACCACTGGCGAATCTCATTACTTCAACCTCCTGAT ACTATTTTTCCTTCACAATCATTGATGGCTGGCCAAGCAATATCATGTTTCTTCACACTAAAGAACTCAAGTAAATTATCAACTTCTGAGGACAACTTGT CTACCATGAATGTCACAAGTGATGTGAGATTGGTTCCCCAAAGCAGAGAGGATTTACTTTACGATGTAAATAGTGCATCTTTGGTCAAGTTCCACCATTA TGAAAGATTGCAGCAGGAATTGTCAGATGAGGGTAATTTAAATACTGTTGATTTTTTATTGATCTCTCAAACACTCAAGAGTAACAGTAATCCTGGGTTT TCTGATCCTCCTCGTGTAATGTCACATCATGCGTGTCACTCCTGTATTGCTAGCACGGGCCCCATT
• Tissue: pods
• Gene name: LI_gene_191387;
• Additional information: details;

Expression of Ll_transcript_307288

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 0
• PS2: 0
• PS3: 0.6
• PW1: 0.7
• PW2: 0
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_307288

• Blastp: Trafficking protein particle complex subunit 8 from Homo with 27.62% of identity
• Blastx: Trafficking protein particle complex subunit 8 from Homo with 27.62% of identity
• Eggnog: trafficking protein particle complex(ENOG410XPCJ)
• Kegg: Link to kegg annotations (22878)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444202.1)
• Pfam: ER-Golgi trafficking TRAPP I complex 85 kDa subunit (PF12739.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;