Ll_transcript_305628

• Id Trinity: TRINITY_DN52271_c0_g1_i9
• Name Transcript: Ll_transcript_305628
• Sequence: CAATAGTCTTATTATCTTATCTCTATCGTAATGTTATTCCATTTATCATCATTATTACAACAAAGGCTCTCTCGGTTTCTCCTCATATTTCTATTTCTCA CCCGCTCTCTTCTCCGAGGAGACAAAAACAAAAGAAAACGATTACTTCCCACTTTCGCTGTAAAACCCTAATCATTCATCATCGATCCCTCTCTCTCTCT TATTCCTCAATTCGCGAGATCCATTCTCAGCCGTTCGATTTCATTTCTCTTAGTGGGTCAACTCTGGCGGGTATTCGGGTCAAGTAAATGGCGGATCCGC CAGATTTCTGCCACCTCTCTCTTGTTTTTAATTCAGTTGAAGAAATCGAAGATTGTTGTTGTTGTTATTGCGAAGTAGAGTGAGAAGAGAAGCATGGTGA GTGTGCTGCGGGTGCACCTGCCTACTGAAATTCCCATTGTAGGCTGCGAACTCACGCCTTACGTTCTCCTCCGCCGCGCCGATAAAACCGTTACAACCGA CGATGTTCCTGAAACCTCCCCTTTAGATGGTCATTACTTGCGCTACAAGTGGTATCGTGTGCAGAGTGATAAAAAGGTTGCTGTCTGTAGCATACATCCA TCTGAGCAGGCCACATTGCAGTGCCTAGGTTGTGTTAAGGCCAGATTACCTGTTGCCAAAAGTTATCATTGCACACCAAAGTGTTTTTCAGATGCATGGC AGCATCATCGTGTCTTGCATGATCGTGCTGCAAGTGCACCTACTGAAAATGGAAATGAGGATGAGGAGGTATTTGGGCGCTTTAATAGTTCTGGGTCTGG GGTAAGCAATTCCAGCTTATCTGCCTCTACATCAAGTGCTAGCTTAATTAATGGGTCTGCATCACCTTATCCAGCAGCTATCACACAAAAAAGTGGTGAA ATTTGGTATGAAGTTGGGCATTGTAAAACTTATACTCCAACAGCTGACGATATTGGTCATGTCCTTAAGTTTGAGTGTGTTGCAATTGATGCAGAGACAA AATTGCCCGTGGGGCATGTTAATACTATACTAACTTCTCGTGTCATTCCTGCTCCCTCGCCTACTCCACGCCAACTAATACCCGTTGATGGGATGGGACA TTTAGATGCAGATGGGTGTATAACATCTTCTGGAACTTTTACTGTTCTATCGTACAATATTTTGTCTGAAGCATATGCCTCAAATGATCTACACAATTAC TGCCCATCATGGGCTCTTTCTTGGACATATCGTAGGCAAAATTTGTTACGAGAAATTGTTGGTTACTGTGCAGACATTATTTGTCTGCAGGAGGTTCAAA GTGACCACTATGAGGAATTTTTCGCTCCTGAACTGGACAAACATGGCTATCATGGTCTTCACAAGAGAAAAACTAATGAGATATACAGTGGCAACACCAA TACAATTGATGGTTGTGCTACATTTTTCCGTAGAGACAGATTTTCACATGTGAAAAAATATGAGGTTGAATTTAATAAGGCTGCACAGTCTTTAATAGAT GCTATGATTCCAACTACTCAGAAGAAAACTGCTTTGAATCGACTGGTTAAGGATAATGTTGCCCTAATTGTGGTTTTGGAAGCAAAAGTTAACAATCAGC CGGTTGATAATGCTGGGAAAAGGCAGCTTCTTTGTGTGGCAAACACGCATGTAAATGTTCACCAAGATTTAAAGGATGTCAAACTCTGGCAGGTGCATAC TCTCTTAAAAGGGTTGGAGAAAATAGCTGCAAGTGCAGACATTCCAATGTTGGTTTGTGGAGATTTTAATTCAGTTCCGGGAAGTGCTCCTCATGCACTT CTTGCAATGGGTAAGGTAGATTCCTCACATCCTGATTTAGCCGTTGACCCACTTAATATCTTGCGCCCTCACAGCAAGTTGGCTCATCAGTTGCCACTGG TCAGTGCATACTCGTCATTTGCAAGAACAGCTGGTCTTGGATTTGAGCTGCATAAAAGAAGACTAGATGGTGGAACAAATGAACCTTTATTCACAAATGT TACTAGAGATTTTATTGGCACTATAGACTACATATTTTACACAGCTGATTCATTGGTTGTGGAGTCATTGCTGGAGTTATTGGATGAGGAGAGGTTGAGG AAGGATACAGCACTTCCTTCCCCTGAATGGTCCTCAGATCATATAGCTCTCTTAGCTGAGTTTCGCTGCTGTAAGAATAAATCTAGGAGCTGATACTAGA AGGTCGGATCAAGAGAACACGCAACGAAAAAAGCTGAACGAAGCACATGGTCGACTAGTTATTGCAGATCTGGTCATGCCTGTCTTTTCCAGGTATCTCC ATGTGGGATCCTTACACTGATCTGCTCTGTATCATGCCACCTTTATCTCATAAAAAAGTTATGATTCTGCTTTATTAACTTCCCTCTTCCCCGCCCCCCT CCTTTTCAATCTCTCCGAATCTTTCTCCTTTTACAGTGGTAATTTTGTCGATAGATTCCCACTCGATCGATCCACCCTAGCAAACAGCTTAGTCCTCCAG ATCTAGTGGCTGCTGAGCTCAGGGCTGTAATATCACCCATATCTTAGACTTAGAGATTTTCAGAATTAGGTCCTTTTGTATTTGCTATGTTGGTCCGAAA CATGAAAATTTGAAATGGCATAAGATAACGAAGTAGGAGAATTACCAATACGGAGATAAATTGCTTAACATAGAAGCCTGAACTATGGCTACATTTGTAG CAACATTGTAACAGATGCTCACTTTAATGCGTTGTAAAAAGGGGCTTGACAAGTTAAATACATCAGTTTTTTTGCCATCCTATTTGAATAGGTAGCAATC AGCAAATGAGTATAGTATCCATGTGTTGGGAGAAAATTACTTCGCATATTTTCAATGAGCGTAATATTTATGCACCGTCAGTGTAAAGATTCATACATAG TCAGTATATCTTCCACTATTCATTTGTATTACTTTTTCTATAGAGTCAATGATGATTGAACGTAAGTGGTGGATGATACATTGACAGTGTATAAAACTCA TACATCATACATTTTTTTCTCTTTTCCAAATAGCCTGTGGTGAGAGGTTATCTAATGTTTTTTCGCTTTTGCAGAATGATTTCTTGGTTATTATTCTCTC TATCTCTTTTCCATTTTGCTACTATTTGCCACAGGAATGATTTAGTTATTCTTGCCAACTTAAAAATTCTATGCTTCTAATGAGTGCAAATTGCTTATTT TGATAATACATAATGCCCTTAGATAAGTTTTAAAAACAATGTGATTGTAAGATTACAAAAAGAGC
• Tissue: pods
• Gene name: LI_gene_191403;
• Additional information: details;

Expression of Ll_transcript_305628

FPKM

• PAB: 8.5
• PNAB: 8.3
• PS1: 9.1
• PS2: 5
• PS3: 7.4
• PW1: 8.7
• PW2: 4
• PW3: 5.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_305628

• Blastp: Carbon catabolite repressor protein 4 homolog 2 from Arabidopsis with 75.21% of identity
• Blastx: Carbon catabolite repressor protein 4 homolog 2 from Arabidopsis with 73.68% of identity
• Eggnog: Ccr4-NOT transcription complex, subunit(COG5239)
• Kegg: Link to kegg annotations (AT3G58580)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428283.1)
• Pfam: zf-MYND-like zinc finger, mRNA-binding (PF15801.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;