| Id Trinity | TRINITY_DN52283_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_306811 |
| Sequence | GAGATCGAACCAATAAAGTAACTCCACGTCACTTAATTCACATCACAAACCCTCAGGTTAATCCACGCTGGCAAATCCAAAACCAGTTATATAACAACAA ACCGAGAAAGAAAGAAACTGAAAAACGAATCAGTGATCGAATCAGAGAAGATCGAAGCATAGAAGCGCGATGAGGAAGTGGTCGCTACCTTCCGCTATCT TTCTCCTCTCTCTCCTCATTCTCATTTCAGATCAAGGTCGAAAGATTGAAGCAAATGCGGCGAGTGATTCGGAAGAGCATGTAGATCTACCTAAAGTGGA GGACAAGATCGGTGCAGTTCCATCTGGTCTTTCAACCGATTCTGACGTGGTTAAGAGGGAGGCTGAGTCTATCTCAAAGAAATCGCTTCGCAGCAATGCG GAGAAATTTGAGTTCCAAGCTGAAGTGTCGCGTCTTATGGATATTATCATCAATTCTCTCTATAGTAACAAGGACATTTTCCTTAGAGAGTTGATCTCCA ATGCATCTGATGCGTTGGACAAGATTAGGTTCCTTTCTCTTACCGATAAGGAGATTTTGGGTGAAGGAGATAATGCTAAGCTTGAAATCCAGATTAAGTT AGACAAGGAAAAGAAAATCCTATCTATTCGAGACAGAGGTATTGGTATGACTAAGGAAGATTTAATAAAGAATTTGGGGACCATAGCAAAATCTGGAACC TCATCTTTTGTTGAGAAAATGCAGAAAACTGGAGACCTCAATCTTATTGGGCAGTTTGGAGTTGGTTTCTACTCTGTGTACCTTGTGGCAGATTACGTTG AAGTCATTAGCAAACATAATGATGATAAACAGTATGTGTGGGAATCTAAAGCCGATGGAGCTTTTGCAATTTCAGAAGATACATGGAATGAACCTCTAGG ACGTGGAACTGAGATTAGGATACACCTCAGAGATGAGGCCCAGGAGTACTTGGAAGAGTTTAAGCTTAAAGAATTGGTGAAGAAATACTCTGAATTTATT AACTTCCCTATCAATCTTTGGGCAAGTAAAGAGGTTGATGTGGAGGTTCCTGCTGATGAAGTCGAGTCTAGTGAGGAGGAGGAAGAGGAATCATCTAAAG CAAGCTCCGAGGAAGAAATTGAAGATGAAGATGCTGAAAAAAAGCCCAAGACAAAGACTGTGAAGGAAACAACTTATGAGTGGGAACTTTTAAATGATGT GAAAGCTATATGGCTGCGGAATCCAAAGGATGTTACAGAGGAAGAGTACAACAAATTCTACCACAGTCTTGCCAAGGATTTTAGTGATGAGAAACCTGTA ACATGGAGTCACTTTAGTGCGGAAGGCGATGTTGAGTTCAAGGCTGTCCTTTTTGTGCCACCTAAAGCTCCTCGTGATTTATATGAGAGTTATTATAATG GAAATAAATCCAACCTGAAGTTGTATGTTAGAAGAGTGTTTATTTCAGATGAATTTGATGAATTGTTGCCAAAATACCTCAGCTTTTTGCAGGGTCTTGT TGATTCTGACTCATTGCCACTTAATGTATCACGAGAAATGCTTCAACAACACAGTAGTCTAAAGACAATCAAGAAGAAACTTATAAGGAAAGCCCTCGAT ATGATACGGAAGATTGCTGAGGAGGATCCTGATGAGTCCAATGACAAAGAAAAGAAAGAAGAGGTATCATCTGACAACGATGAGAAAAGAGGTCAATATT CTAAGTTCTGGAAGGAGTTTGGGAAGTCCATTAAACTTGGTATCATCGAAGATGCTACTAACAGAAATCGTCTAGCAAAACTACTCAGATTTGAGACTTC CAAGTCCGAGGGTAAACTGACTTCTCTGGATCAGTACATCTCTAGAATGAAATCTGAACAGAAGGATATCTTTTACATAACTGGAACCAGCAAGGAACAA TTAGAAAAATCTCCATTCCTTGAGCAACTTAAGAAGAAAAATTATGAGGTTATTTTCTTCACTGATCCTGTTGATGAGTACTTGATGCAATACCTCATGG ATTATGAGGACAAGAAGTTCCAAAATGTGTCCAAGGAGGGCCTGAAACTCGGGAAGAGTTCTAAAGACAAGGAACTGAAGGAATCCTTCAAGGATCTTAC TAAGTGGTGGAAAAAGTCCCTTGCTGCTAGTGAGAATCTTGATGATGTGAAGATATCCAACCGTTTGGATAACACTCCTTGTGTGGTAGTGACGTCAAAA TTTGGCTGGAGTGCTAACATGGAGAGGATAATGCAGTCTCAAACTTTAGCAAATACTGCCAGCCAAGCATACATGCGTGGCAAGAGGGTTCTTGAGATCA ATCCCAGACACCCTATTATCAAGGAACTCCGGGATAGAGTAGCTAATAACCCTGAGGTACTTTCTATATTTGAATTACTTTCCCCTGTCCTAATAGAAAT TGAGATAATAACATTTGAAAACACTGTTGCTTTGTTTGTTATGGCACGATAGAGTTAAGCTCCTCCCATTCTAAAGTACGACAGTCCACACTAATGCTTG ATTTTGTATTCTCTTGTAAGAGAGTTCGCCTTGAAGGTTGAGACACTGTTATGTTGCTTTGGCTAGTGAATCTACTACCAGCTTGGTTTTTGTAGTGACT CAATGCTTGAATGATTGGGTTTTTATGTTATCCAGCTACCCCTTTCCCTAACAGAATTGAGGTTTATTGGTTAACGCATTCCGCTTACATTTCAGGATGA GGGTGTGAAGCAAACAGCACAGCTGATATACCAGACTGCTCTCTTTGAAAGTGGTTTCATTCTAAATGACCCTAAGGAATTTGCTTCTCGCATTTATGAC TCAGTGAAATCTAGCTTGGACATTAATCCGGAAGCAACTGTTGATGAGGAAGATGAAACTGAAGAGGTTGAGTCTGAAGAAAGTGATGCAAAAGAAGCTG CATCTACATCAGAGGCCGAGGCCGAGGCTGAGGCTGAGGCTGCTAATGATGCTGCTGATGTCAAGGATGAGTTGTAGATTTTGAACTCCAGCGTCCCTTT CTTTATTGCTTGATTTAACATTGAGATAGATGGAGAAAGCTCTGTGAGCATGAGTTTTTATTTTCATTCCATATGTAGTTTGATAAAGGAACGTATTAGT CGTAACAACGCTATCCCAGGAATTTTGTCCTACCATTTACTTGTTCTTCAACAAAATATGCCGTCTTTTATTTTTTACTTACGTTGTCATCATCAATTTT CTTCTCTCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_191472; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_306811
| Blastp | Endoplasmin homolog from Catharanthus with 83.79% of identity |
|---|---|
| Blastx | Endoplasmin homolog from Catharanthus with 85.82% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416726.1) |
| Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (PF02518.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |