Ll_transcript_306812

• Id Trinity: TRINITY_DN52283_c0_g1_i12
• Name Transcript: Ll_transcript_306812
• Sequence: TATAAATGGAAGAAGGTTAGATAAATCAACTCAGTTCAGTGTTACAAGAAGAAGCGAAGCTACTAGAAACTCAACACCATCACTACTTTCATGAAGAAGT GGACTCTCCCTTCAGTTCTTCTTCTACTCTCTCTCCTCCTTCTATTTTCAGATCAAGGTCAAAAATTGAAGGCAAATGCAGAGGCTGATTCAGAAGAGCT TGTAGATCCACCTAAGATTGAGGACAAGATCGGTGCTGTTCCTCATGGCCTTTCCACTGATTCAGATGTGGTCAAGAGGGAGGCAGAGTCGATTTCGAAG AATAGATCACTTCGGAGCAATGCAGAGAAGTTTGAGTTCCAAGCAGAGGTGTCGCGGCTTATGGATATTATCATTAACTCGCTCTATAGTAACAAAGATA TTTTCCTCAGGGAGTTGATCTCTAATGCTTCTGATGCATTGGACAAGATTAGGTTCCTCTCCCTCACAGATAAGGACGTTTTGGGTGAAGGTGATAATGC GAAGCTTGAAATCCAGATTAAGTTGGACAAGGAAAAGAAAATCCTGTCGATTCGAGACAGAGGTATTGGAATGACAAAGGAGGATTTAATTAAGAATCTG GGAACTATAGCAAAATCTGGAACTTCAGCTTTTGTTGAGAAAATGCAGACAAGTGGAGATCTCAATCTCATTGGGCAGTTTGGAGTTGGTTTCTACTCTG TTTATCTTGTGGCTGACTATGTTGAAGTCATTAGCAAGCATAATGAAGACAAACAGTATGTGTGGGAATCAAAAGCTGATGGAGCATTTGCCATTTCAGA AGATACATGGAATGAGCCACTAGGACGTGGAACTGAGATTAGATTACACCTCAAAGATGAGGCTGGGGAGTACTTAGAGGAGTCTAAACTGAAAGAATTG GTGAAGAGATACTCTGAATTTATTAACTTCCCTATCTATATTTGGGCGAGCAAAGAGGTTGATGTGGAGGTTCCTGCTGATGAAGATGATTCTAATGATG AAGACGAATCATCCGAAAGCAGCTCCTCTGACGAAGAAACTGAAGATGTCAATAAAAGTGAAGATGAAGAAAAGAAGCCCAAGACAAAGAAGGTGAAGGA AACGACTTATGAATGGGAACTTTTAAATGATGTGAAAGCTATATGGCTGCGGAATCCAAAGGAGGTTACAGATGAAGAGTACACCAAATTCTACCACTCT CTTGCCAAGGTAATATTGTCATCTTAATTATCTCTGAGAAGCTTTAAGCTAATTATAGTGTGAAGTTCACTCCACTCTGAAGTTTGTTAATACTTTAATA CTCCTGAGGTTGTGGAATTATGTTTTGTGCAGGATTTAAGTGATGAGAAACCTTTAGCATGGAGTCACTTTATTGCTGAAGGTGATGTTGAGTTCAAGGC AGTCCTGTTTGTGCCACCTAAGGCTCCTCAAGATTTATATGAGAGTTACTACAACTCAAACAAATCCAACCTGAAGCTGTATGTTAGACGTGTGTTTATT TCAGATGAATTTGATGAACTGTTGCCAAAATATCTCAACTTTTTGCAGGGTCTTGTAGATTCTGACACATTACCACTTAATGTATCACGAGAAATGCTTC AACAACACAGTAGTCTAAAAACAATCAAGAAGAAACTTATTAGGAAAGCCCTTGATATGATTCGTAGGATTGCCGAAGAAGATCCTGATGAGTCATCTGA CAAAGAAAAGAAAGAAGAGGTGTCCTCTGACAATGATGAAAAGAGAGGTCAATATGCTAAGTTCTGGAATGAGTTTGGGAAGTCCATTAAACTTGGTATC ATTGAGGATGCCACAAACAGAAATCGGTTGGCAAAACTACTCAGATTTGAGAGCACGAAGTCCGATGGTAAATTGGTTTCTCTTGATCAGTACATATCTA GAATGAAAGCTGGACAGAAGGATATATTTTACATAACTGGAACCAACAAAGAACAGCTAGAAAAATCTCCATTCCTTGAGCGGCTTAAGAAGAAAAATTT TGAGGTTATTTACTTCACTGATCCAGTTGATGAATACTTGATGCAATACCTGATGGATTATGAAGATAAAAAGTTCCAGAATGTGTCCAAGGAGGGTTTG AAACTTGGGAAGGGCGCAAAGGACAAGGAACTGAAGGAGTCCTTCAAGGATCTTACGAGGTGGTGGAAAAATACCCTTGCCAGTGAGAATGTTGATGATG TGAAGATATCCAACCGATTGGATAACACCCCTTGTGTGGTGGTGACATCAAAATTTGGTTGGAGTGCCAACATGGAAAGAATCATGCAGTCTCAAACTTT GTCAGATGCTAGCAAACAAGCATACATGCGGGGCAAGAGGGTTCTTGAGATCAATCCTAGGCACCCTATAATCAAGGAGCTCCGTGAGAGAGTAGTAAAG AACCCTGAGGATGAGAGTGTGAAGCATACAGCAGAGCTGATGTACCAGACTGCACTCTTTGAAAGCGGCTTCCTACTTGACGATCCCAAGGATTTTGCTT CACGTGTTTATGATTCAGTGAAGTCTAGCTTAGACATCAGTCCCGATGCTGCAGTTGAAGAGGAAGATGACACCCAAGAAGTCGAGGCTGAAAGTGACAC GAAAGAAGATGCATCTACTTCAAAGGCGGAAGCTGAAGCTGTGAATGATGAAAATAATGATGCCAAAGACGAGTTGTAGATTTTTCTGCTGCCTCTGTTT CTTGGTTTAGTTTTATGAAATAGATCGAAGAGCCCTCTAGAATGAGTATTGACTCCCTATGAAGTTGTTAAAGGAGCACGTTAGTCTTAACTTAATCACC GTCCAATGGAACTTTTGTTTGGTGAAACATTATCCAATGGAATTTCCCTTAGCATTATAGTAAACTGTTAGAGAAAATCTACTTCTGTACTTCTTCATGT AACTCAGTAGGGTGTCCTTTATGTTTAATGTTCAGCCTTTTCCACCCTGTTAACAATTTTAATCCTGTAAGTGCAAAAATTGTTGAGTAAAAATGCTGTA TCCAATCTCTGGCCGATCCTTAAGTAGTTTATGCTTAGAAAATGTTATCTTTTTCTGGTTGGAATATAGGTCTAATAACATTTTGTAATCATAAAGGTTA GCCATTGAATTGAATTGGAATATTCTTAATGAAGGGCTGTACTAATGTTCACGGCTTCACGCTCAGTTTGAACCTGAGGTAGAACTTGAAGCATTCATAA GTCCTCTGGCTGCTACAATTGAGGTGAAGATCTGAGTCCAACTTTTCAGATTTGAGTCTAATGTATCGACAAAAAATGTAAGTCATGCCATACTTTAATT ATTGTGATTGTATATCATCAATTCAACGCTAACTATAAGTGCTCTTTAACTAAATAGATTCTAC
• Tissue: pods
• Gene name: LI_gene_191472;
• Additional information: details;

Expression of Ll_transcript_306812

FPKM

• PAB: 0.1
• PNAB: 0.6
• PS1: 0.1
• PS2: 0.3
• PS3: 0.3
• PW1: 0.2
• PW2: 0.3
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_306812

• Blastp: Endoplasmin homolog from Catharanthus with 82.89% of identity
• Blastx: Endoplasmin homolog from Catharanthus with 77.46% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_003545030.1)
• Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (PF02518.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;