| Id Trinity | TRINITY_DN52283_c0_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_306813 |
| Sequence | TTTGAAATTATAGTTTGAAAGAAGAAGGTACTAGAAACTCAGTGCGAGGATGAGGAAGTGGACACTCCCTTCCATTCTTCTTCTACTCTCTCTCCTCCTT CTATTTTCAGATCAAGGTCAAAAACTGAAGGCAAATGCAGAGGCAAATTCTGAAGAGCTTGTAGATCCACCTAAGGTGGAGGACAAGATTGGTGCTGTTC CTCATGGTCTTTCCACTGATTCAGATGTGGCTAAGAGGGAAGCGGAGTCGATTTCGAAGAGATCGCTTCGGAGTAATGCGGAGAAGTTTGAGTTCCAAGC TGAGGTGTCGCGGCTTATGGACATTATCATCAACTCACTATACAGTAACAAAGATATTTTCCTGAGGGAGTTGATCTCTAATGCTTCTGATGCATTGGAC AAGATCAGGTTCCTCTCCCTCACAGATAAGGAGGTTTTGGGCGAAGGTGATAATGCCAAGCTTGAAATCCAGATTAAGTTAGACAAGGAAAAGAAAATTT TATCGATTCGAGATAGAGGTATCGGTATGACAAAGGAGGATTTAATTAAGAATCTTGGGACCATAGCAAAATCTGGAACTTCAGCATTTGTTGAGAAAAT GCAAACAAGTGGAGATCTCAATCTTATTGGGCAGTTCGGAGTTGGCTTCTACTCTGTGTATCTTGTGGCTGACTATGTTGAAGTCATTAGCAAGCATAAT GATGACAAACAGTATGTATGGGAATCAAAAGCTGATGGAGCATTTGCCATTTCAGAAGATACATGGAATGAGCCACTAGGGCGTGGAACTGAGATCAGAC TGCACCTTAAAGATGAGGCGGGAGAGTACTTGGAGGAGTCTAAGCTGAAAGAATTGGTGAAGAGATATTCTGAATTTATTAACTTCCCTATCTATATTTG GGCAAGCAAAGAGGTTGATGTGGAGGTCCCTGCTGATGAAGATGATTCTAGCAATGAAGACGAATCATCTGAAAGCAGATCCCCAGAGGAAGAAAGTGAG GAAGCTGCTGATGAAAGTGGAGATGAAGAAAAAAAGCCTAAGACGAAGACGGTGAAGGAAACAACTTATGAATGGGAACTTTTAAATGATGTGAAAGCTA TATGGCTGCGGAATCCAAAGGAGGTTACAGATGAAGAGTACACCAAATTTTACCACTCTCTTGCCAAGGATTTAAGTGATGATAAACCTTTAGCATGGAG TCACTTTATTGCTGAAGGTGATGTTGAGTTCAAGGCAGTCCTGTTTGTGCCACCCAAGGCTCCTCATGATTTATATGAGAGTTACTACAACTCAAACAAA TCCAACCTGAAGTTGTTTGTTAGACGAGTGTTTATTTCAGATGAATTTGATGAACTGTTGCCTAAATACCTCAACTTTTTGAAGGGCCTTGTAGATTCTG ACACATTACCACTTAATGTATCAAGAGAAATGCTTCAACAACACAGTAGTCTAAAAACAATCAAGAAGAAACTTATTAGGAAAGCCCTTGATATGATCCG TAGGATTGCGGAAGAAGATCCTGACGAGTCATCTGACAAAGAAAAGAAAGAAGAAGTGTCCTCCAAAAATGATGAGAAGAGAGGTCAATATGCTAAGTTT TGGAATGAGTTTGGCAAGTCTATTAAACTTGGTATCATTGAGGATGCCACCAACAGAAATCGGTTGGCAAAACTGCTCAGATTTGAGAGCACCAAGTCCG AGGGTAAATTGACTTCTCTAGATCAGTACATATCTAGAATGAAAGCTGGACAGAAGGATATCTTTTACATAACTGGAACCAGCAAGGAACAATTAGAAAA ATCTCCATTCCTTGAGCAACTTAAGAAGAAAAATTATGAGGTTATTTTCTTCACTGATCCTGTTGATGAGTACTTGATGCAATACCTCATGGATTATGAG GACAAGAAGTTCCAAAATGTGTCCAAGGAGGGCCTGAAACTCGGGAAGAGTTCTAAAGACAAGGAACTGAAGGAATCCTTCAAGGATCTTACTAAGTGGT GGAAAAGCTCCCTTGTTGGTGAGAATGTTGATGATGTGAAGATATCCAATCGTTTGGATAACACTCCTTGTGTGGTAGTGATATCAAAATTTGGTTGGAG TGCTAACATGGAGAGAATAATGCAGTCTCAAACTTTAATAGATCCTGCGAAGCAAGCATACATGCGTGGAAAGAGGGTTCTTGAGATCAATCCCAGACAC CCTATCATTAAGGAACTCAGGGATAGAGTAGTTAACAACCCAGAGGATGAGAGTGTGAAGAAAACGACACAATTGATGTACCAGACTGCTCTCTTTGAAA GTGCTTTCGTGCTAAATGATCCCAAGGATTTTACATCTCGCATTTATGACTCAGTGAAACTTAGCTTGGATATTAGTCCGGAAGCAACTGTTGAAGAGGA AGTTGAAACAAGTGATGAAAAAGAAGATGCATCTGCATCAAAAGCTGAGGCTGATTATGATGCCAAGGATGAGTTGTAGTTTTTGGTTTAGCATTTTGAT ATAAACGGGGAAAACCCTATGAGCATGAGTTTTTTTCTCCATATAGTTTGACAAAGAAACCCATTATTCTTGAAGAAAATAATATGCCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_191472; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_306813
| Blastp | Endoplasmin homolog from Catharanthus with 83.48% of identity |
|---|---|
| Blastx | Endoplasmin homolog from Catharanthus with 84.83% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453253.1) |
| Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (PF02518.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |