Ll_transcript_306814

• Id Trinity: TRINITY_DN52283_c0_g1_i14
• Name Transcript: Ll_transcript_306814
• Sequence: TATAAATGGAAGAAGGTTAGATAAATCAACTCAGTTCAGTGTTACAAGAAGAAGCGAAGCTACTAGAAACTCAACACCATCACTACTTTCATGAAGAAGT GGACTCTCCCTTCAGTTCTTCTTCTACTCTCTCTCCTCCTTCTATTTTCAGATCAAGGTCAAAAATTGAAGGCAAATGCAGAGGCTGATTCAGAAGAGCT TGTAGATCCACCTAAGATTGAGGACAAGATCGGTGCTGTTCCTCATGGCCTTTCCACTGATTCAGATGTGGTCAAGAGGGAGGCAGAGTCGATTTCGAAG AATAGATCACTTCGGAGCAATGCAGAGAAGTTTGAGTTCCAAGCAGAGGTGTCGCGGCTTATGGATATTATCATTAACTCGCTCTATAGTAACAAAGATA TTTTCCTCAGGGAGTTGATCTCTAATGCTTCTGATGCATTGGACAAGATTAGGTTCCTCTCCCTCACAGATAAGGACGTTTTGGGTGAAGGTGATAATGC GAAGCTTGAAATCCAGATTAAGTTGGACAAGGAAAAGAAAATCCTGTCGATTCGAGACAGAGGTATTGGAATGACAAAGGAGGATTTAATTAAGAATCTG GGAACTATAGCAAAATCTGGAACTTCAGCTTTTGTTGAGAAAATGCAGACAAGTGGAGATCTCAATCTCATTGGGCAGTTTGGAGTTGGTTTCTACTCTG TTTATCTTGTGGCTGACTATGTTGAAGTCATTAGCAAGCATAATGAAGACAAACAGTATGTGTGGGAATCAAAAGCTGATGGAGCATTTGCCATTTCAGA AGATACATGGAATGAGCCACTAGGACGTGGAACTGAGATTAGATTACACCTCAAAGATGAGGCTGGGGAGTACTTAGAGGAGTCTAAACTGAAAGAATTG GTGAAGAGATACTCTGAATTTATTAACTTCCCTATCTATATTTGGGCGAGCAAAGAGGTTGATGTGGAGGTTCCTGCTGATGAAGATGATTCTAATGATG AAGACGAATCATCCGAAAGCAGCTCCTCTGACGAAGAAACTGAAGATGTCAATAAAAGTGAAGATGAAGAAAAGAAGCCCAAGACAAAGAAGGTGAAGGA AACGACTTATGAATGGGAACTTTTAAATGATGTGAAAGCTATATGGCTGCGGAATCCAAAGGAGGTTACAGATGAAGAGTACACCAAATTCTACCACTCT CTTGCCAAGGATTTAAGTGATGAGAAACCTTTAGCATGGAGTCACTTTATTGCTGAAGGTGATGTTGAGTTCAAGGCAGTCCTGTTTGTGCCACCTAAGG CTCCTCAAGATTTATATGAGAGTTACTACAACTCAAACAAATCCAACCTGAAGCTGTATGTTAGACGTGTGTTTATTTCAGATGAATTTGATGAACTGTT GCCAAAATATCTCAACTTTTTGCAGGGTCTTGTAGATTCTGACACATTACCACTTAATGTATCACGAGAAATGCTTCAACAACACAGTAGTTTAAAGACA ATCAAGAAGAAACTTATAAGGAAAGCCCTTGATATGATCCGTAGGATTGCGGAAGAAGATCCTGACGAGTCATCTGACAAAGAAAAGAAAGGTATGGTGT AATAAATCTATTGGTTCCACTTGCTGGAATCCCAATCCTTTTCTGCTGGTCAAGGTTGTTCAAATCTTGTATGTCAGTCCTAAAAATGTTGGGCTGGCTT GTACTTGTAGTGTGTCATTTTTTGTTTTGTTTATATGTAATTTGGCTTTGTCATCTCTTTTTAAATGTAAGGTGATGTTTTTTTCTCGATTCCGTTCAAT AACCTTGCACTCACACCAATCTTAAATTGTGATACAGAAGAAGTGTCCTCCAAAAATGATGAGAAGAGAGGTCAATATGCTAAGTTTTGGAATGAGTTTG GCAAGTCTATTAAACTTGGTATCATTGAGGATGCCACCAACAGAAATCGGTTGGCAAAACTGCTCAGATTTGAGAGCACCAAGTCCGAGGGTAAATTGAC TTCTCTAGATCAGTACATATCTAGAATGAAAGCTGGACAGAAGGATATATTTTACATAACTGGAACCAACAAAGAACAGCTGGAAAAATCTCCATTCCTC GAGCGGCTTAAGAAGAAAAATTTTGAGGTTATTTACTTCACAGATCCAGTTGATGAATACTTGATGCAATACCTGATGGATTATGAAGATAAAAAGTTCC AAAATGTCTCCAAGGAGGGTTTGAAACTTGGGAAGGATGCAAAGGACAAGGAACTGAAGGAATCCTTCAAGGATCTTACCAAGTGGTGGAAAAATACCCT TGCCAGTGAGAATGTCGATGATGTGAAGATATCGAACCGATTGGATAACACTCCTTGTGTGGTGGTGACGTCAAAATATGGTTGGAGTGCTAACATGGAG AGAATCATGCAGTCTCAAACATTGTCAGATTCTAGCAAGCAAGCATACATGCGAGGCAAGAGGGTTCTTGAGATCAATCCCAGGCACCCGATAATCAAGG AGCTCCGAGAGAGAGTAGTGAAGGACCCTGAGGATGAGAGCGTGAAGCATACAGCCGAGCTAATGTATCAGACTGCACTCTTCGAAAGCGGCTTCCTACT TGATGATCCCAAGGATTTTGCTTCGCGTGTTTACGATTCAGTTAAGTCTAGCTTAGACATCAGTCCCGAAGCCACAGTTGAAGAGGAAGATGACACCGAA GAAGTCGAGGCTGAAAGTGACGCGAAAGATGCATCTACTTCAAAGCCAGATGCTGAAGATGTGAATGATAATGCTGATTTCAAGGACGAGTTGTAGATTT TTCCGTTGTCTCTGTTTCTTGGTTTAGCTTTATGAGATAGATGGTAGGAGACCTCTCTCTAGTAGGAGTTTTGGCTCCATATGTAGTTTTTAAAAAAGTT AGTCTTAACTTTATCACACTGTACTTGAGAATTTTGCCTTCGCATTAATAGTGAACTGTTCAAGAAAATCTCCCTCTGTACTTTTCATGTATGTTTATCA TTTTATGTTTAATGTTCAGCCTTTTCCACCTACTTCACAATTTTAATCCTCAAAGTGCAAAAAATGTTGAGTGGAAATGCCGTATGTTCAATCATGTTTT GGCTGAATATGCCCAATCATTTTAGAGGCTTAAAATTG
• Tissue: pods
• Gene name: LI_gene_191472;
• Additional information: details;

Expression of Ll_transcript_306814

FPKM

• PAB: 2.2
• PNAB: 29.2
• PS1: 42.9
• PS2: 28.6
• PS3: 25.2
• PW1: 22.8
• PW2: 12.5
• PW3: 7.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_306814

• Blastp: Endoplasmin homolog from Catharanthus with 84.63% of identity
• Blastx: Endoplasmin homolog from Catharanthus with 85.27% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_017430523.1)
• Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (PF02518.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;