Ll_transcript_306815

• Id Trinity: TRINITY_DN52283_c0_g1_i15
• Name Transcript: Ll_transcript_306815
• Sequence: TTTGAAATTATAGTTTGAAAGAAGAAGGTACTAGAAACTCAGTGCGAGGATGAGGAAGTGGACACTCCCTTCCATTCTTCTTCTACTCTCTCTCCTCCTT CTATTTTCAGATCAAGGTCAAAAACTGAAGGCAAATGCAGAGGCAAATTCTGAAGAGCTTGTAGATCCACCTAAGGTGGAGGACAAGATTGGTGCTGTTC CTCATGGTCTTTCCACTGATTCAGATGTGGCTAAGAGGGAAGCGGAGTCGATTTCGAAGAGATCGCTTCGGAGTAATGCGGAGAAGTTTGAGTTCCAAGC TGAGGTGTCGCGGCTTATGGACATTATCATCAACTCACTATACAGTAACAAAGATATTTTCCTGAGGGAGTTGATCTCTAATGCTTCTGATGCATTGGAC AAGATCAGGTTCCTCTCCCTCACAGATAAGGAGGTTTTGGGCGAAGGTGATAATGCCAAGCTTGAAATCCAGATTAAGTTAGACAAGGAAAAGAAAATTT TATCGATTCGAGATAGAGGTATCGGTATGACAAAGGAGGATTTAATTAAGAATCTTGGGACCATAGCAAAATCTGGAACTTCAGCATTTGTTGAGAAAAT GCAAACAAGTGGAGATCTCAATCTTATTGGGCAGTTCGGAGTTGGCTTCTACTCTGTGTATCTTGTGGCTGACTATGTTGAAGTCATTAGCAAGCATAAT GATGACAAACAGTATGTATGGGAATCAAAAGCTGATGGAGCATTTGCCATTTCAGAAGATACATGGAATGAGCCACTAGGGCGTGGAACTGAGATCAGAC TGCACCTTAAAGATGAGGCGGGAGAGTACTTGGAGGAGTCTAAGCTGAAAGAATTGGTGAAGAGATATTCTGAATTTATTAACTTCCCTATCTATATTTG GGCAAGCAAAGAGGTTGATGTGGAGGTCCCTGCTGATGAAGATGATTCTAGCAATGAAGACGAATCATCTGAAAGCAGATCCCCAGAGGAAGAAAGTGAG GAAGCTGCTGATGAAAGTGGAGATGAAGAAAAAAAGCCTAAGACGAAGACGGTGAAGGAAACAACTTATGAATGGGAACTTTTAAATGATGTGAAAGCTA TATGGCTGCGGAATCCAAAGGAGGTTACAGATGAAGAGTACACCAAATTTTACCACTCTCTTGCCAAGGATTTAAGTGATGATAAACCTTTAGCATGGAG TCACTTTATTGCTGAAGGTGATGTTGAGTTCAAGGCAGTCCTGTTTGTGCCACCCAAGGCTCCTCATGATTTATATGAGAGTTACTACAACTCAAACAAA TCCAACCTGAAGTTGTTTGTTAGACGAGTGTTTATTTCAGATGAATTTGATGAACTGTTGCCTAAATACCTCAACTTTTTGAAGGGCCTTGTAGATTCTG ACACATTACCACTTAATGTATCAAGAGAAATGCTTCAACAACACAGTAGTCTAAAAACAATCAAGAAGAAACTTATTAGGAAAGCCCTTGATATGATCCG TAGGATTGCGGAAGAAGATCCTGACGAGTCATCTGACAAAGAAAAGAAAGAAGAAGTGTCCTCCAAAAATGATGAGAAGAGAGGTCAATATGCTAAGTTT TGGAATGAGTTTGGCAAGTCTATTAAACTTGGTATCATTGAGGATGCCACCAACAGAAATCGGTTGGCAAAACTGCTCAGATTTGAGAGCACCAAGTCCG AGGGTAAATTGACTTCTCTAGATCAGTACATATCTAGAATGAAAGCTGGACAGAAGGATATCTTTTACATAACTGGAACCAGCAAGGAACAATTAGAAAA ATCTCCATTCCTTGAGCAACTTAAGAAGAAAAATTATGAGGTTATTTTCTTCACTGATCCTGTTGATGAGTACTTGATGCAATACCTCATGGATTATGAG GACAAGAAGTTCCAAAATGTGTCCAAGGAGGGCCTGAAACTCGGGAAGAGTTCTAAAGACAAGGAACTGAAGGAATCCTTCAAGGATCTTACTAAGTGGT GGAAAAAGTCCCTTGCTGCTAGTGAGAATCTTGATGATGTGAAGATATCCAACCGTTTGGATAACACTCCTTGTGTGGTAGTGACGTCAAAATTTGGCTG GAGTGCTAACATGGAGAGGATAATGCAGTCTCAAACTTTAGCAAATACTGCCAGCCAAGCATACATGCGTGGCAAGAGGGTTCTTGAGATCAATCCCAGA CACCCTATTATCAAGGAACTCCGGGATAGAGTAGCTAATAACCCTGAGGTACTTTCTATATTTGAATTACTTTCCCCTGTCCTAATAGAAATTGAGATAA TAACATTTGAAAACACTGTTGCTTTGTTTGTTATGGCACGATAGAGTTAAGCTCCTCCCATTCTAAAGTACGACAGTCCACACTAATGCTTGATTTTGTA TTCTCTTGTAAGAGAGTTCGCCTTGAAGGTTGAGACACTGTTATGTTGCTTTGGCTAGTGAATCTACTACCAGCTTGGTTTTTGTAGTGACTCAATGCTT GAATGATTGGGTTTTTATGTTATCCAGCTACCCCTTTCCCTAACAGAATTGAGGTTTATTGGTTAACGCATTCCGCTTACATTTCAGGATGAGGGTGTGA AGCAAACAGCACAGCTGATATACCAGACTGCTCTCTTTGAAAGTGGTTTCATTCTAAATGACCCTAAGGAATTTGCTTCTCGCATTTATGACTCAGTGAA ATCTAGCTTGGACATTAATCCGGAAGCAACTGTTGATGAGGAAGATGAAACTGAAGAGGTTGAGTCTGAAGAAAGTGATGCAAAAGAAGCTGCATCTACA TCAGAGGCCGAGGCCGAGGCTGAGGCTGAGGCTGCTAATGATGCTGCTGATGTCAAGGATGAGTTGTAGATTTTGAACTCCAGCGTCCCTTTCTTTATTG CTTGATTTAACATTGAGATAGATGGAGAAAGCTCTGTGAGCATGAGTTTTTATTTTCATTCCATATGTAGTTTGATAAAGGAACGTATTAGTCGTAACAA CGCTATCCCAGGAATTTTGTCCTACCATTTACTTGTTCTTCAACAAAATATGCCGTCTTTTATTTTTTACTTACGTTGTCATCATCAATTTTCTTCTCTC C
• Tissue: pods
• Gene name: LI_gene_191472;
• Additional information: details;

Expression of Ll_transcript_306815

FPKM

• PAB: 0.6
• PNAB: 5.7
• PS1: 5.9
• PS2: 0.9
• PS3: 1.3
• PW1: 3.1
• PW2: 1.4
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_306815

• Blastp: Endoplasmin homolog from Catharanthus with 86.1% of identity
• Blastx: Endoplasmin homolog from Catharanthus with 84.82% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453253.1)
• Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (PF02518.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;