Id Trinity | TRINITY_DN52283_c0_g1_i16 |
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Name Transcript | Ll_transcript_306816 |
Sequence | CTTATGGCATTTTCTGAAAGAATTTCCATTTACAATAACGTTTGATGTATGTTAACCTGAACCATTTACGATATATGTCTGCAGCTTTTGTTGAGAAAAT GCAGAAAACTGGAGACCTCAATCTTATTGGGCAGTTTGGAGTTGGTTTCTATTCCGTGTATCTTGTGGCAGACTATGTTGAAGTCATCAGTAAACATAAT GATGATAAACAGTATGTGTGGGAATCTAAAGCCGATGGAGCTTTTGCAATTTCAGAAGATACATGGAATGAACCTCTAGGACGTGGAACTGAGATTAGGA TACACCTCAGAGATGAGGCCAGCGAGTACTTGGAGGAGTTTAACCTTAAAGAATTGGTGAAGAGATACTCTGAATTTATTAACTTCCCTATCAATCTTTG GGCAAGCAAAGAGGTTGATGTAGAGGTTCCTGCTGATGTGGATGAGACCAGTGAGGAGGAGGAATCATCTAAAACCAGCTCCGAGGAAGAAAATGAAAAT GAAGATGAAGATGGTGAGAAACAGCCCAAGACAAAGACGGTGAAGCAAACAACTCATGAGTGGGAAGTTTTAAATAATGTGAAAGCTATATGGCTACGGA ATCCAAAGGATGTTACAGATGAAGAGTACAACAAATTCTACCACACTCTTGCCAAGCATGGAGTCACTTTACTGCGGAAGGTGATGTTGAGTTCAAGGCT GTCCTGTTTGTGCCACCTAAAGCTCCTCGTGATTTATATGATACTTATTATAATGCACATAAATCGAACCTGAAGTTGTATGTTAGAAGAGTGTTTATTT CAGATGAATTGTTGCCAAAATACCTCAGCTTTTTGAAGGGTCTTCTTGATTCTGACTCATTGCCACTTAATGTATCACGAGAAATGCTTCAGCAACACAG TAGTCTAAAGACAATCAAGAAGAAACTTATAAGGAAAGCCCTTGATATGATCCGTAGGATTGCTGATGAGTCCACCGACAAAGACAATAAAGTAGAGGTG TCATTTGACAATGATGAGAAAAAGGGTCAATATGCTAAGTTTTGGAAT BLAST |
Tissue | pods |
Gene name | LI_gene_191472; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_306816
Blastp | Endoplasmin homolog from Hordeum with 78.24% of identity |
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Blastx | Endoplasmin homolog from Arabidopsis with 69.59% of identity |
Eggnog | Molecular chaperone. Has ATPase activity (By similarity)(COG0326) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019415505.1) |
Pfam | Hsp90 protein (PF00183.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |