Ll_transcript_306817

• Id Trinity: TRINITY_DN52283_c0_g1_i17
• Name Transcript: Ll_transcript_306817
• Sequence: TATAAATGGAAGAAGGTTAGATAAATCAACTCAGTTCAGTGTTACAAGAAGAAGCGAAGCTACTAGAAACTCAACACCATCACTACTTTCATGAAGAAGT GGACTCTCCCTTCAGTTCTTCTTCTACTCTCTCTCCTCCTTCTATTTTCAGATCAAGGTCAAAAATTGAAGGCAAATGCAGAGGCTGATTCAGAAGAGCT TGTAGATCCACCTAAGATTGAGGACAAGATCGGTGCTGTTCCTCATGGCCTTTCCACTGATTCAGATGTGGTCAAGAGGGAGGCAGAGTCGATTTCGAAG AATAGATCACTTCGGAGCAATGCAGAGAAGTTTGAGTTCCAAGCAGAGGTGTCGCGGCTTATGGATATTATCATTAACTCGCTCTATAGTAACAAAGATA TTTTCCTCAGGGAGTTGATCTCTAATGCTTCTGATGCATTGGACAAGATTAGGTTCCTCTCCCTCACAGATAAGGACGTTTTGGGTGAAGGTGATAATGC GAAGCTTGAAATCCAGATTAAGTTGGACAAGGAAAAGAAAATCCTGTCGATTCGAGACAGAGGTATTGGAATGACAAAGGAGGATTTAATTAAGAATCTG GGAACTATAGCAAAATCTGGAACTTCAGCTTTTGTTGAGAAAATGCAGACAAGTGGAGATCTCAATCTCATTGGGCAGTTTGGAGTTGGTTTCTACTCTG TTTATCTTGTGGCTGACTATGTTGAAGTCATTAGCAAGCATAATGAAGACAAACAGTATGTGTGGGAATCAAAAGCTGATGGAGCATTTGCCATTTCAGA AGATACATGGAATGAGCCACTAGGACGTGGAACTGAGATTAGATTACACCTCAAAGATGAGGCTGGGGAGTACTTAGAGGAGTCTAAACTGAAAGAATTG GTGAAGAGATACTCTGAATTTATTAACTTCCCTATCTATATTTGGGCGAGCAAAGAGGTTGATGTGGAGGTTCCTGCTGATGAAGATGATTCTAATGATG AAGACGAATCATCCGAAAGCAGCTCCTCTGACGAAGAAACTGAAGATGTCAATAAAAGTGAAGATGAAGAAAAGAAGCCCAAGACAAAGAAGGTGAAGGA AACGACTTATGAATGGGAACTTTTAAATGATGTGAAAGCTATATGGCTGCGGAATCCAAAGGAGGTTACAGATGAAGAGTACACCAAATTCTACCACTCT CTTGCCAAGGTAATATTGTCATCTTAATTATCTCTGAGAAGCTTTAAGCTAATTATAGTGTGAAGTTCACTCCACTCTGAAGTTTGTTAATACTTTAATA CTCCTGAGGTTGTGGAATTATGTTTTGTGCAGGATTTAAGTGATGAGAAACCTTTAGCATGGAGTCACTTTATTGCTGAAGGTGATGTTGAGTTCAAGGC AGTCCTGTTTGTGCCACCCAAGGCTCCTCATGATTTATATGAGAGTTACTACAACTCAAACAAATCCAACCTGAAGTTGTTTGTTAGACGAGTGTTTATT TCAGATGAATTTGATGAACTGTTGCCTAAATACCTCAACTTTTTGAAGGGCCTTGTAGATTCTGACACATTACCACTTAATGTATCAAGAGAAATGCTTC AACAACACAGTAGTCTAAAAACAATCAAGAAGAAACTTATTAGGAAAGCCCTTGATATGATCCGTAGGATTGCGGAAGAAGATCCTGACGAGTCATCTGA CAAAGAAAAGAAAGAAGAAGTGTCCTCCAAAAATGATGAGAAGAGAGGTCAATATGCTAAGTTTTGGAATGAGTTTGGCAAGTCTATTAAACTTGGTATC ATTGAGGATGCCACCAACAGAAATCGGTTGGCAAAACTGCTCAGATTTGAGAGCACCAAGTCCGAGGGTAAATTGACTTCTCTAGATCAGTACATATCTA GAATGAAAGCTGGACAGAAGGATATATTTTACATAACTGGAACCAACAAAGAACAGCTGGAAAAATCTCCATTCCTCGAGCGGCTTAAGAAGAAAAATTT TGAGGTTATTTACTTCACAGATCCAGTTGATGAATACTTGATGCAATACCTGATGGATTATGAAGATAAAAAGTTCCAAAATGTCTCCAAGGAGGGTTTG AAACTTGGGAAGGATGCAAAGGACAAGGAACTGAAGGAATCCTTCAAGGATCTTACCAAGTGGTGGAAAAATACCCTTGCCAGTGAGAATGTCGATGATG TGAAGATATCGAACCGATTGGATAACACTCCTTGTGTGGTGGTGACGTCAAAATATGGTTGGAGTGCTAACATGGAGAGAATCATGCAGTCTCAAACATT GTCAGATTCTAGCAAGCAAGCATACATGCGAGGCAAGAGGGTTCTTGAGATCAATCCCAGGCACCCGATAATCAAGGAGCTCCGAGAGAGAGTAGTGAAG GACCCTGAGGATGAGAGCGTGAAGCATACAGCCGAGCTAATGTATCAGACTGCACTCTTCGAAAGCGGCTTCCTACTTGATGATCCCAAGGATTTTGCTT CGCGTGTTTACGATTCAGTTAAGTCTAGCTTAGACATCAGTCCCGAAGCCACAGTTGAAGAGGAAGATGACACCGAAGAAGTCGAGGCTGAAAGTGACGC GAAAGATGCATCTACTTCAAAGCCAGATGCTGAAGATGTGAATGATAATGCTGATTTCAAGGACGAGTTGTAGATTTTTCCGTTGTCTCTGTTTCTTGGT TTAGCTTTATGAGATAGATGGTAGGAGACCTCTCTCTAGTAGGAGTTTTGGCTCCATATGTAGTTTTTAAAAAAGTTAGTCTTAACTTTATCACACTGTA CTTGAGAATTTTGCCTTCGCATTAATAGTGAACTGTTCAAGAAAATCTCCCTCTGTACTTTTCATGTATGTTTATCATTTTATGTTTAATGTTCAGCCTT TTCCACCTACTTCACAATTTTAATCCTCAAAGTGCAAAAAATGTTGAGTGGAAATGCCGTATGTTCAATCATGTTTTGGCTGAATATGCCCAATCATTTT AGAGGCTTAAAATTG
• Tissue: pods
• Gene name: LI_gene_191472;
• Additional information: details;

Expression of Ll_transcript_306817

FPKM

• PAB: 2.6
• PNAB: 15.8
• PS1: 33.8
• PS2: 20.6
• PS3: 18.2
• PW1: 24.7
• PW2: 12.4
• PW3: 7.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_306817

• Blastp: Endoplasmin homolog from Catharanthus with 82.89% of identity
• Blastx: Endoplasmin homolog from Catharanthus with 78.23% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_014504844.1)
• Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (PF02518.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;