Ll_transcript_306818

• Id Trinity: TRINITY_DN52283_c0_g1_i18
• Name Transcript: Ll_transcript_306818
• Sequence: TATAAATGGAAGAAGGTTAGATAAATCAACTCAGTTCAGTGTTACAAGAAGAAGCGAAGCTACTAGAAACTCAACACCATCACTACTTTCATGAAGAAGT GGACTCTCCCTTCAGTTCTTCTTCTACTCTCTCTCCTCCTTCTATTTTCAGATCAAGGTCAAAAATTGAAGGCAAATGCAGAGGCTGATTCAGAAGAGCT TGTAGATCCACCTAAGATTGAGGACAAGATCGGTGCTGTTCCTCATGGCCTTTCCACTGATTCAGATGTGGTCAAGAGGGAGGCAGAGTCGATTTCGAAG AATAGATCACTTCGGAGCAATGCAGAGAAGTTTGAGTTCCAAGCAGAGGTGTCGCGGCTTATGGATATTATCATTAACTCGCTCTATAGTAACAAAGATA TTTTCCTCAGGGAGTTGATCTCTAATGCTTCTGATGCATTGGACAAGATTAGGTTCCTCTCCCTCACAGATAAGGACGTTTTGGGTGAAGGTGATAATGC GAAGCTTGAAATCCAGATTAAGTTGGACAAGGAAAAGAAAATCCTGTCGATTCGAGACAGAGGTATTGGAATGACAAAGGAGGATTTAATTAAGAATCTG GGAACTATAGCAAAATCTGGAACTTCAGCTTTTGTTGAGAAAATGCAGACAAGTGGAGATCTCAATCTCATTGGGCAGTTTGGAGTTGGTTTCTACTCTG TTTATCTTGTGGCTGACTATGTTGAAGTCATTAGCAAGCATAATGAAGACAAACAGTATGTGTGGGAATCAAAAGCTGATGGAGCATTTGCCATTTCAGA AGATACATGGAATGAGCCACTAGGACGTGGAACTGAGATTAGATTACACCTCAAAGATGAGGCTGGGGAGTACTTAGAGGAGTCTAAACTGAAAGAATTG GTGAAGAGATACTCTGAATTTATTAACTTCCCTATCTATATTTGGGCGAGCAAAGAGGTTGATGTGGAGGTTCCTGCTGATGAAGATGATTCTAATGATG AAGACGAATCATCCGAAAGCAGCTCCTCTGACGAAGAAACTGAAGATGTCAATAAAAGTGAAGATGAAGAAAAGAAGCCCAAGACAAAGAAGGTGAAGGA AACGACTTATGAATGGGAACTTTTAAATGATGTGAAAGCTATATGGCTGCGGAATCCAAAGGAGGTTACAGATGAAGAGTACACCAAATTCTACCACTCT CTTGCCAAGGATTTAAGTGATGAGAAACCTTTAGCATGGAGTCACTTTATTGCTGAAGGTGATGTTGAGTTCAAGGCAGTCCTGTTTGTGCCACCTAAGG CTCCTCAAGATTTATATGAGAGTTACTACAACTCAAACAAATCCAACCTGAAGCTGTATGTTAGACGTGTGTTTATTTCAGATGAATTTGATGAACTGTT GCCAAAATATCTCAACTTTTTGCAGGGTCTTGTAGATTCTGACACATTACCACTTAATGTATCACGAGAAATGCTTCAACAACACAGTAGTCTAAAAACA ATCAAGAAGAAACTTATTAGGAAAGCCCTTGATATGATTCGTAGGATTGCCGAAGAAGATCCTGATGAGTCATCTGACAAAGAAAAGAAAGAAGAGGTGT CCTCTGACAATGATGAAAAGAGAGGTCAATATGCTAAGTTCTGGAATGAGTTTGGGAAGTCCATTAAACTTGGTATCATTGAGGATGCCACAAACAGAAA TCGGTTGGCAAAACTACTCAGATTTGAGAGCACGAAGTCCGATGGTAAATTGGTTTCTCTTGATCAGTACATATCTAGAATGAAAGCTGGACAGAAGGAT ATATTTTACATAACTGGAACCAACAAAGAACAGCTAGAAAAATCTCCATTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAGGTGCAAATAAAATCTTTTC CTTTTTATGCAAAAGATTTTTAGGAAAAATCTCATGATTTTTAAGTGCATCTTCTTTTTAAACTTCTGCAGGTTATTTACTTCACAGATCCAGTTGATGA ATACTTGAT
• Tissue: pods
• Gene name: LI_gene_191472;
• Additional information: details;

Expression of Ll_transcript_306818

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0.5
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_306818

• Blastp: Endoplasmin homolog from Catharanthus with 84.65% of identity
• Blastx: Endoplasmin homolog from Catharanthus with 87.5% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_014504844.1)
• Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (PF02518.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;